EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000015815 (Gene tree)
Gene ID: 696963
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 75837 bases
Position: chr13:87791927-87867763
Accession: 696963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000020791	RNA_pol_Rpb1_5	PF04998.17	6.4e-104	1	1
ENSMMUP00000020791	RNA_pol_Rpb1_4	PF05000.17	1.5e-25	1	1
ENSMMUP00000020791	RNA_pol_Rpb1_2	PF00623.20	1.9e-70	1	1
ENSMMUP00000020791	RNA_pol_Rpb1_3	PF04983.18	1e-35	1	1
ENSMMUP00000020791	RNA_pol_Rpb1_1	PF04997.12	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000022222	POLR1A-201	5290	XM_015112779	ENSMMUP00000020791	1720 (aa)	XP_014968265	F7AG21

Gene Model

Click here to download ENSMMUG00000015815's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000015815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000015815	POLR1A	85	30.769	ENSMMUG00000023620	-	71	30.769
ENSMMUG00000015815	POLR1A	62	32.796	ENSMMUG00000005514	POLR3A	70	32.796

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000015815	POLR1A	100	97.674	ENSG00000068654	POLR1A	100	97.674	Homo_sapiens
ENSMMUG00000015815	POLR1A	69	67.929	ENSAPOG00000017945	polr1a	99	68.266	Acanthochromis_polyacanthus
ENSMMUG00000015815	POLR1A	100	91.512	ENSAMEG00000005807	POLR1A	100	92.520	Ailuropoda_melanoleuca
ENSMMUG00000015815	POLR1A	100	63.594	ENSACIG00000022147	polr1a	100	62.841	Amphilophus_citrinellus
ENSMMUG00000015815	POLR1A	100	65.767	ENSAOCG00000017336	polr1a	100	68.239	Amphiprion_ocellaris
ENSMMUG00000015815	POLR1A	95	74.306	ENSAPEG00000016105	polr1a	98	74.306	Amphiprion_percula
ENSMMUG00000015815	POLR1A	100	66.532	ENSATEG00000016773	polr1a	100	65.723	Anabas_testudineus
ENSMMUG00000015815	POLR1A	86	73.171	ENSAPLG00000013871	POLR1A	99	73.171	Anas_platyrhynchos
ENSMMUG00000015815	POLR1A	99	69.643	ENSACAG00000012141	POLR1A	99	68.714	Anolis_carolinensis
ENSMMUG00000015815	POLR1A	100	95.174	ENSANAG00000033927	POLR1A	100	95.000	Aotus_nancymaae
ENSMMUG00000015815	POLR1A	100	62.212	ENSACLG00000020541	polr1a	100	61.600	Astatotilapia_calliptera
ENSMMUG00000015815	POLR1A	100	90.413	ENSBTAG00000006481	POLR1A	100	90.413	Bos_taurus
ENSMMUG00000015815	POLR1A	99	38.522	WBGene00012999	rpoa-1	98	38.181	Caenorhabditis_elegans
ENSMMUG00000015815	POLR1A	100	94.767	ENSCJAG00000019547	POLR1A	100	94.767	Callithrix_jacchus
ENSMMUG00000015815	POLR1A	100	90.888	ENSCAFG00000007613	POLR1A	100	90.761	Canis_familiaris
ENSMMUG00000015815	POLR1A	100	90.683	ENSCAFG00020014752	POLR1A	100	90.556	Canis_lupus_dingo
ENSMMUG00000015815	POLR1A	100	88.355	ENSCHIG00000018204	POLR1A	100	88.297	Capra_hircus
ENSMMUG00000015815	POLR1A	100	90.529	ENSTSYG00000002761	POLR1A	100	90.122	Carlito_syrichta
ENSMMUG00000015815	POLR1A	97	84.198	ENSCAPG00000010132	POLR1A	100	83.871	Cavia_aperea
ENSMMUG00000015815	POLR1A	100	88.734	ENSCPOG00000012350	POLR1A	100	88.560	Cavia_porcellus
ENSMMUG00000015815	POLR1A	100	95.349	ENSCCAG00000019839	POLR1A	100	95.349	Cebus_capucinus
ENSMMUG00000015815	POLR1A	100	99.593	ENSCATG00000029786	POLR1A	100	99.593	Cercocebus_atys
ENSMMUG00000015815	POLR1A	100	89.217	ENSCLAG00000005187	POLR1A	100	88.754	Chinchilla_lanigera
ENSMMUG00000015815	POLR1A	100	99.360	ENSCSAG00000016251	POLR1A	100	99.360	Chlorocebus_sabaeus
ENSMMUG00000015815	POLR1A	99	74.332	ENSCPBG00000001115	POLR1A	99	74.375	Chrysemys_picta_bellii
ENSMMUG00000015815	POLR1A	99	47.045	ENSCSAVG00000007184	-	99	46.784	Ciona_savignyi
ENSMMUG00000015815	POLR1A	100	96.107	ENSCANG00000031785	POLR1A	100	96.107	Colobus_angolensis_palliatus
ENSMMUG00000015815	POLR1A	96	89.507	ENSCGRG00001006651	Polr1a	100	83.092	Cricetulus_griseus_chok1gshd
ENSMMUG00000015815	POLR1A	60	86.320	ENSCGRG00000010834	Polr1a	100	86.750	Cricetulus_griseus_crigri
ENSMMUG00000015815	POLR1A	100	62.065	ENSCSEG00000020190	polr1a	100	61.891	Cynoglossus_semilaevis
ENSMMUG00000015815	POLR1A	100	64.494	ENSCVAG00000020941	polr1a	100	65.064	Cyprinodon_variegatus
ENSMMUG00000015815	POLR1A	100	66.860	ENSDARG00000098375	polr1a	100	66.531	Danio_rerio
ENSMMUG00000015815	POLR1A	100	83.362	ENSDNOG00000010829	POLR1A	100	82.841	Dasypus_novemcinctus
ENSMMUG00000015815	POLR1A	100	87.739	ENSDORG00000008298	Polr1a	100	87.565	Dipodomys_ordii
ENSMMUG00000015815	POLR1A	80	44.341	FBgn0019938	RpI1	99	43.180	Drosophila_melanogaster
ENSMMUG00000015815	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSMMUG00000015815	POLR1A	88	66.667	ENSEBUG00000005667	-	99	66.667	Eptatretus_burgeri
ENSMMUG00000015815	POLR1A	100	92.267	ENSEASG00005001625	POLR1A	100	92.267	Equus_asinus_asinus
ENSMMUG00000015815	POLR1A	100	92.267	ENSECAG00000036306	-	100	93.347	Equus_caballus
ENSMMUG00000015815	POLR1A	100	92.267	ENSECAG00000030510	-	100	93.347	Equus_caballus
ENSMMUG00000015815	POLR1A	100	92.267	ENSECAG00000010092	POLR1A	100	93.347	Equus_caballus
ENSMMUG00000015815	POLR1A	81	94.681	ENSEEUG00000000676	POLR1A	81	94.444	Erinaceus_europaeus
ENSMMUG00000015815	POLR1A	100	66.917	ENSELUG00000012769	polr1a	99	66.917	Esox_lucius
ENSMMUG00000015815	POLR1A	100	91.744	ENSFCAG00000008966	POLR1A	100	91.570	Felis_catus
ENSMMUG00000015815	POLR1A	99	71.202	ENSFALG00000010082	POLR1A	99	70.303	Ficedula_albicollis
ENSMMUG00000015815	POLR1A	100	89.024	ENSFDAG00000013726	POLR1A	100	88.269	Fukomys_damarensis
ENSMMUG00000015815	POLR1A	100	62.043	ENSFHEG00000005996	polr1a	100	61.863	Fundulus_heteroclitus
ENSMMUG00000015815	POLR1A	100	59.791	ENSGMOG00000002230	polr1a	100	59.524	Gadus_morhua
ENSMMUG00000015815	POLR1A	90	69.621	ENSGALG00000038160	-	99	69.750	Gallus_gallus
ENSMMUG00000015815	POLR1A	100	64.965	ENSGAFG00000015266	polr1a	100	64.757	Gambusia_affinis
ENSMMUG00000015815	POLR1A	100	65.167	ENSGACG00000018791	polr1a	100	64.642	Gasterosteus_aculeatus
ENSMMUG00000015815	POLR1A	89	74.919	ENSGAGG00000004984	-	96	80.531	Gopherus_agassizii
ENSMMUG00000015815	POLR1A	100	97.733	ENSGGOG00000001788	POLR1A	100	97.733	Gorilla_gorilla
ENSMMUG00000015815	POLR1A	90	64.337	ENSHBUG00000020021	polr1a	99	64.537	Haplochromis_burtoni
ENSMMUG00000015815	POLR1A	100	89.257	ENSHGLG00000006334	POLR1A	100	89.082	Heterocephalus_glaber_female
ENSMMUG00000015815	POLR1A	100	88.998	ENSHGLG00100006614	POLR1A	100	88.825	Heterocephalus_glaber_male
ENSMMUG00000015815	POLR1A	100	62.003	ENSHCOG00000003345	polr1a	100	62.182	Hippocampus_comes
ENSMMUG00000015815	POLR1A	100	66.108	ENSIPUG00000013174	polr1a	100	65.320	Ictalurus_punctatus
ENSMMUG00000015815	POLR1A	99	87.609	ENSSTOG00000012580	POLR1A	99	87.318	Ictidomys_tridecemlineatus
ENSMMUG00000015815	POLR1A	100	87.594	ENSJJAG00000013113	Polr1a	100	87.420	Jaculus_jaculus
ENSMMUG00000015815	POLR1A	100	66.028	ENSKMAG00000007399	polr1a	100	65.447	Kryptolebias_marmoratus
ENSMMUG00000015815	POLR1A	95	68.277	ENSLBEG00000015401	polr1a	99	67.713	Labrus_bergylta
ENSMMUG00000015815	POLR1A	53	76.170	ENSLACG00000003218	polr1a	100	76.170	Latimeria_chalumnae
ENSMMUG00000015815	POLR1A	100	70.415	ENSLOCG00000010881	polr1a	100	70.127	Lepisosteus_oculatus
ENSMMUG00000015815	POLR1A	100	89.815	ENSLAFG00000014948	POLR1A	100	89.931	Loxodonta_africana
ENSMMUG00000015815	POLR1A	100	99.884	ENSMFAG00000046097	POLR1A	100	99.884	Macaca_fascicularis
ENSMMUG00000015815	POLR1A	100	99.826	ENSMNEG00000043313	POLR1A	100	99.826	Macaca_nemestrina
ENSMMUG00000015815	POLR1A	100	99.012	ENSMLEG00000042428	POLR1A	100	99.012	Mandrillus_leucophaeus
ENSMMUG00000015815	POLR1A	100	65.764	ENSMAMG00000016565	polr1a	100	65.990	Mastacembelus_armatus
ENSMMUG00000015815	POLR1A	100	65.875	ENSMZEG00005004915	polr1a	100	65.394	Maylandia_zebra
ENSMMUG00000015815	POLR1A	99	69.217	ENSMGAG00000013111	POLR1A	99	69.333	Meleagris_gallopavo
ENSMMUG00000015815	POLR1A	92	87.272	ENSMAUG00000008497	Polr1a	100	87.618	Mesocricetus_auratus
ENSMMUG00000015815	POLR1A	100	92.737	ENSMICG00000000757	POLR1A	100	92.446	Microcebus_murinus
ENSMMUG00000015815	POLR1A	100	87.319	ENSMOCG00000000122	Polr1a	100	87.261	Microtus_ochrogaster
ENSMMUG00000015815	POLR1A	100	64.965	ENSMMOG00000010216	polr1a	100	64.539	Mola_mola
ENSMMUG00000015815	POLR1A	100	75.431	ENSMODG00000009335	POLR1A	100	75.029	Monodelphis_domestica
ENSMMUG00000015815	POLR1A	100	65.759	ENSMALG00000013363	polr1a	100	64.997	Monopterus_albus
ENSMMUG00000015815	POLR1A	100	85.450	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.640	Mus_caroli
ENSMMUG00000015815	POLR1A	100	85.987	ENSMUSG00000049553	Polr1a	100	85.929	Mus_musculus
ENSMMUG00000015815	POLR1A	100	86.740	MGP_PahariEiJ_G0022230	Polr1a	100	86.393	Mus_pahari
ENSMMUG00000015815	POLR1A	100	84.966	MGP_SPRETEiJ_G0029499	Polr1a	100	84.760	Mus_spretus
ENSMMUG00000015815	POLR1A	100	91.105	ENSMPUG00000009135	POLR1A	100	90.988	Mustela_putorius_furo
ENSMMUG00000015815	POLR1A	100	89.879	ENSMLUG00000015723	POLR1A	100	89.532	Myotis_lucifugus
ENSMMUG00000015815	POLR1A	100	87.760	ENSNGAG00000017907	Polr1a	100	88.137	Nannospalax_galili
ENSMMUG00000015815	POLR1A	100	65.283	ENSNBRG00000000519	polr1a	100	65.587	Neolamprologus_brichardi
ENSMMUG00000015815	POLR1A	100	95.428	ENSNLEG00000002264	POLR1A	100	95.428	Nomascus_leucogenys
ENSMMUG00000015815	POLR1A	75	93.701	ENSMEUG00000011665	-	75	93.701	Notamacropus_eugenii
ENSMMUG00000015815	POLR1A	99	82.864	ENSOPRG00000008269	POLR1A	100	82.160	Ochotona_princeps
ENSMMUG00000015815	POLR1A	100	89.431	ENSODEG00000003542	POLR1A	100	88.966	Octodon_degus
ENSMMUG00000015815	POLR1A	100	66.184	ENSONIG00000015895	polr1a	100	65.953	Oreochromis_niloticus
ENSMMUG00000015815	POLR1A	100	90.994	ENSOCUG00000010138	POLR1A	100	90.994	Oryctolagus_cuniculus
ENSMMUG00000015815	POLR1A	100	65.182	ENSORLG00000008753	polr1a	99	64.931	Oryzias_latipes
ENSMMUG00000015815	POLR1A	100	63.947	ENSORLG00020020726	polr1a	99	63.347	Oryzias_latipes_hni
ENSMMUG00000015815	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSMMUG00000015815	POLR1A	100	91.453	ENSOGAG00000004031	POLR1A	100	91.453	Otolemur_garnettii
ENSMMUG00000015815	POLR1A	100	89.785	ENSOARG00000020601	POLR1A	100	89.919	Ovis_aries
ENSMMUG00000015815	POLR1A	100	97.384	ENSPPAG00000042450	POLR1A	100	97.384	Pan_paniscus
ENSMMUG00000015815	POLR1A	100	92.035	ENSPPRG00000006702	POLR1A	100	91.686	Panthera_pardus
ENSMMUG00000015815	POLR1A	100	91.483	ENSPTIG00000018783	POLR1A	100	91.136	Panthera_tigris_altaica
ENSMMUG00000015815	POLR1A	100	97.209	ENSPTRG00000012147	POLR1A	100	97.209	Pan_troglodytes
ENSMMUG00000015815	POLR1A	100	99.477	ENSPANG00000025908	POLR1A	100	99.477	Papio_anubis
ENSMMUG00000015815	POLR1A	94	77.083	ENSPKIG00000005468	polr1a	99	77.083	Paramormyrops_kingsleyae
ENSMMUG00000015815	POLR1A	63	71.468	ENSPSIG00000009321	-	99	71.101	Pelodiscus_sinensis
ENSMMUG00000015815	POLR1A	54	68.556	ENSPMGG00000009718	polr1a	95	68.556	Periophthalmus_magnuspinnatus
ENSMMUG00000015815	POLR1A	100	87.970	ENSPEMG00000022224	Polr1a	100	88.130	Peromyscus_maniculatus_bairdii
ENSMMUG00000015815	POLR1A	95	79.587	ENSPCIG00000004222	POLR1A	99	78.845	Phascolarctos_cinereus
ENSMMUG00000015815	POLR1A	100	65.527	ENSPFOG00000005025	polr1a	100	65.064	Poecilia_formosa
ENSMMUG00000015815	POLR1A	100	65.701	ENSPLAG00000021389	polr1a	100	65.238	Poecilia_latipinna
ENSMMUG00000015815	POLR1A	100	63.789	ENSPMEG00000006463	polr1a	100	63.636	Poecilia_mexicana
ENSMMUG00000015815	POLR1A	100	65.469	ENSPREG00000002389	polr1a	100	65.026	Poecilia_reticulata
ENSMMUG00000015815	POLR1A	100	96.977	ENSPPYG00000012217	POLR1A	100	96.977	Pongo_abelii
ENSMMUG00000015815	POLR1A	88	96.000	ENSPCAG00000011582	POLR1A	88	96.000	Procavia_capensis
ENSMMUG00000015815	POLR1A	100	92.388	ENSPCOG00000026987	POLR1A	100	92.272	Propithecus_coquereli
ENSMMUG00000015815	POLR1A	95	91.912	ENSPVAG00000012674	POLR1A	95	91.166	Pteropus_vampyrus
ENSMMUG00000015815	POLR1A	100	65.875	ENSPNYG00000000026	polr1a	100	65.394	Pundamilia_nyererei
ENSMMUG00000015815	POLR1A	100	67.169	ENSPNAG00000019223	polr1a	99	67.894	Pygocentrus_nattereri
ENSMMUG00000015815	POLR1A	100	88.072	ENSRNOG00000009545	Polr1a	100	87.724	Rattus_norvegicus
ENSMMUG00000015815	POLR1A	100	98.547	ENSRBIG00000028335	POLR1A	100	98.547	Rhinopithecus_bieti
ENSMMUG00000015815	POLR1A	100	98.488	ENSRROG00000031473	POLR1A	100	98.488	Rhinopithecus_roxellana
ENSMMUG00000015815	POLR1A	99	37.025	YOR341W	RPA190	99	36.989	Saccharomyces_cerevisiae
ENSMMUG00000015815	POLR1A	100	94.535	ENSSBOG00000030262	POLR1A	100	94.535	Saimiri_boliviensis_boliviensis
ENSMMUG00000015815	POLR1A	100	74.006	ENSSHAG00000014739	POLR1A	100	72.842	Sarcophilus_harrisii
ENSMMUG00000015815	POLR1A	100	67.690	ENSSFOG00015019716	polr1a	100	67.362	Scleropages_formosus
ENSMMUG00000015815	POLR1A	100	66.377	ENSSMAG00000014342	polr1a	100	65.895	Scophthalmus_maximus
ENSMMUG00000015815	POLR1A	100	66.264	ENSSDUG00000014631	polr1a	100	66.358	Seriola_dumerili
ENSMMUG00000015815	POLR1A	100	64.269	ENSSLDG00000024095	polr1a	100	64.406	Seriola_lalandi_dorsalis
ENSMMUG00000015815	POLR1A	75	97.872	ENSSARG00000003136	-	76	97.872	Sorex_araneus
ENSMMUG00000015815	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSMMUG00000015815	POLR1A	63	72.336	ENSSPAG00000016341	polr1a	94	72.109	Stegastes_partitus
ENSMMUG00000015815	POLR1A	83	91.521	ENSSSCG00000008226	POLR1A	99	91.497	Sus_scrofa
ENSMMUG00000015815	POLR1A	99	70.294	ENSTGUG00000010704	POLR1A	100	70.059	Taeniopygia_guttata
ENSMMUG00000015815	POLR1A	100	64.113	ENSTRUG00000002210	polr1a	99	63.794	Takifugu_rubripes
ENSMMUG00000015815	POLR1A	100	60.495	ENSTNIG00000010116	polr1a	100	60.472	Tetraodon_nigroviridis
ENSMMUG00000015815	POLR1A	74	97.345	ENSTBEG00000008646	POLR1A	70	100.000	Tupaia_belangeri
ENSMMUG00000015815	POLR1A	100	86.512	ENSTTRG00000008597	POLR1A	100	86.105	Tursiops_truncatus
ENSMMUG00000015815	POLR1A	69	91.547	ENSUAMG00000012158	-	94	90.955	Ursus_americanus
ENSMMUG00000015815	POLR1A	100	90.640	ENSUMAG00000006700	POLR1A	100	90.233	Ursus_maritimus
ENSMMUG00000015815	POLR1A	100	90.714	ENSVVUG00000001245	POLR1A	100	90.587	Vulpes_vulpes
ENSMMUG00000015815	POLR1A	100	67.861	ENSXETG00000001952	polr1a	100	69.258	Xenopus_tropicalis
ENSMMUG00000015815	POLR1A	100	65.451	ENSXMAG00000004032	polr1a	100	65.182	Xiphophorus_maculatus