EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000016838 (Gene tree)
Gene ID: 720712
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 77618 bases
Position: chr1:5224329-5301946
Accession: 720712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000040646	ResIII	PF04851.15	8.8e-08	1	1
ENSMMUP00000022147	ResIII	PF04851.15	1.1e-07	1	1
ENSMMUP00000029253	ResIII	PF04851.15	1.2e-07	1	1
ENSMMUP00000022145	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000047623	CHD5-203	5733	-	ENSMMUP00000040646	1910 (aa)	-	F7GDA8
ENSMMUT00000031258	CHD5-201	9408	XM_015140678	ENSMMUP00000029253	1934 (aa)	XP_014996164	F6Z8A7
ENSMMUT00000023667	CHD5-202	5862	-	ENSMMUP00000022147	1953 (aa)	-	F7C307
ENSMMUT00000023665	CHD5-204	5859	XM_015140630	ENSMMUP00000022145	1952 (aa)	XP_014996116	F7C337

Gene Model

Click here to download ENSMMUG00000016838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000016838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000016838	CHD5	98	68.394	ENSMMUG00000022221	CHD3	82	85.990
ENSMMUG00000016838	CHD5	94	72.159	ENSMMUG00000018685	-	96	71.635

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000016838	CHD5	99	99.222	ENSG00000116254	CHD5	99	99.222	Homo_sapiens
ENSMMUG00000016838	CHD5	99	96.108	ENSAMEG00000009880	CHD5	99	96.108	Ailuropoda_melanoleuca
ENSMMUG00000016838	CHD5	94	79.074	ENSACIG00000012582	chd5	99	77.205	Amphilophus_citrinellus
ENSMMUG00000016838	CHD5	93	80.580	ENSAOCG00000020356	chd5	93	79.286	Amphiprion_ocellaris
ENSMMUG00000016838	CHD5	96	80.812	ENSAPLG00000015475	CHD5	98	82.616	Anas_platyrhynchos
ENSMMUG00000016838	CHD5	99	82.898	ENSACAG00000002441	CHD5	99	82.540	Anolis_carolinensis
ENSMMUG00000016838	CHD5	87	98.640	ENSANAG00000001078	CHD5	91	98.640	Aotus_nancymaae
ENSMMUG00000016838	CHD5	93	76.565	ENSACLG00000003012	chd5	96	76.220	Astatotilapia_calliptera
ENSMMUG00000016838	CHD5	86	82.526	ENSAMXG00000008921	chd5	92	90.995	Astyanax_mexicanus
ENSMMUG00000016838	CHD5	94	96.582	ENSBTAG00000040477	CHD5	100	96.865	Bos_taurus
ENSMMUG00000016838	CHD5	99	98.600	ENSCJAG00000000101	CHD5	99	98.600	Callithrix_jacchus
ENSMMUG00000016838	CHD5	93	97.138	ENSCAFG00000019545	CHD5	100	97.138	Canis_familiaris
ENSMMUG00000016838	CHD5	99	96.781	ENSCAFG00020008689	CHD5	96	96.781	Canis_lupus_dingo
ENSMMUG00000016838	CHD5	99	94.479	ENSCHIG00000015027	CHD5	98	93.261	Capra_hircus
ENSMMUG00000016838	CHD5	99	91.907	ENSTSYG00000033991	CHD5	99	92.237	Carlito_syrichta
ENSMMUG00000016838	CHD5	99	95.485	ENSCAPG00000009294	CHD5	100	95.485	Cavia_aperea
ENSMMUG00000016838	CHD5	99	95.485	ENSCPOG00000025080	CHD5	100	95.485	Cavia_porcellus
ENSMMUG00000016838	CHD5	99	98.807	ENSCCAG00000024756	CHD5	99	98.807	Cebus_capucinus
ENSMMUG00000016838	CHD5	99	98.703	ENSCATG00000043011	CHD5	99	98.703	Cercocebus_atys
ENSMMUG00000016838	CHD5	99	95.851	ENSCLAG00000010589	CHD5	99	95.851	Chinchilla_lanigera
ENSMMUG00000016838	CHD5	99	99.741	ENSCSAG00000000733	CHD5	99	99.741	Chlorocebus_sabaeus
ENSMMUG00000016838	CHD5	93	91.004	ENSCPBG00000019363	CHD5	100	90.894	Chrysemys_picta_bellii
ENSMMUG00000016838	CHD5	99	99.637	ENSCANG00000032302	CHD5	99	99.637	Colobus_angolensis_palliatus
ENSMMUG00000016838	CHD5	55	96.792	ENSCGRG00001011042	Chd5	100	96.792	Cricetulus_griseus_chok1gshd
ENSMMUG00000016838	CHD5	99	95.062	ENSCGRG00000011341	Chd5	99	94.958	Cricetulus_griseus_crigri
ENSMMUG00000016838	CHD5	94	68.268	ENSDARG00000025789	chd4b	96	66.355	Danio_rerio
ENSMMUG00000016838	CHD5	97	77.784	ENSDARG00000105083	chd5	98	80.180	Danio_rerio
ENSMMUG00000016838	CHD5	99	91.909	ENSDNOG00000046342	CHD5	99	91.805	Dasypus_novemcinctus
ENSMMUG00000016838	CHD5	99	95.956	ENSDORG00000005923	Chd5	100	95.956	Dipodomys_ordii
ENSMMUG00000016838	CHD5	99	94.862	ENSEASG00005021464	CHD5	99	96.735	Equus_asinus_asinus
ENSMMUG00000016838	CHD5	99	94.447	ENSECAG00000025043	CHD5	98	98.333	Equus_caballus
ENSMMUG00000016838	CHD5	77	98.578	ENSEEUG00000002772	CHD5	77	98.605	Erinaceus_europaeus
ENSMMUG00000016838	CHD5	93	77.691	ENSELUG00000010742	chd5	88	91.089	Esox_lucius
ENSMMUG00000016838	CHD5	99	96.316	ENSFCAG00000006319	CHD5	99	96.316	Felis_catus
ENSMMUG00000016838	CHD5	99	88.469	ENSFALG00000009740	CHD5	99	88.573	Ficedula_albicollis
ENSMMUG00000016838	CHD5	99	95.433	ENSFDAG00000012881	CHD5	97	93.779	Fukomys_damarensis
ENSMMUG00000016838	CHD5	99	88.625	ENSGALG00000000747	CHD5	99	88.211	Gallus_gallus
ENSMMUG00000016838	CHD5	57	82.904	ENSGACG00000004389	chd5	93	83.180	Gasterosteus_aculeatus
ENSMMUG00000016838	CHD5	88	96.020	ENSGAGG00000001590	CHD5	99	95.122	Gopherus_agassizii
ENSMMUG00000016838	CHD5	99	99.170	ENSGGOG00000000708	CHD5	100	99.170	Gorilla_gorilla
ENSMMUG00000016838	CHD5	94	76.538	ENSHBUG00000013453	chd5	96	76.974	Haplochromis_burtoni
ENSMMUG00000016838	CHD5	99	95.634	ENSHGLG00000018184	CHD5	99	95.864	Heterocephalus_glaber_female
ENSMMUG00000016838	CHD5	99	88.906	ENSHGLG00100013261	CHD5	98	88.564	Heterocephalus_glaber_male
ENSMMUG00000016838	CHD5	94	79.040	ENSIPUG00000005446	chd5	98	78.489	Ictalurus_punctatus
ENSMMUG00000016838	CHD5	99	96.784	ENSSTOG00000002778	CHD5	100	96.570	Ictidomys_tridecemlineatus
ENSMMUG00000016838	CHD5	99	95.426	ENSJJAG00000019072	Chd5	99	95.280	Jaculus_jaculus
ENSMMUG00000016838	CHD5	96	83.154	ENSLOCG00000004944	chd5	94	82.822	Lepisosteus_oculatus
ENSMMUG00000016838	CHD5	99	97.040	ENSLAFG00000006348	CHD5	99	97.040	Loxodonta_africana
ENSMMUG00000016838	CHD5	99	99.844	ENSMFAG00000033993	CHD5	100	99.890	Macaca_fascicularis
ENSMMUG00000016838	CHD5	99	99.793	ENSMNEG00000040044	CHD5	99	99.793	Macaca_nemestrina
ENSMMUG00000016838	CHD5	99	96.211	ENSMLEG00000039166	CHD5	100	96.211	Mandrillus_leucophaeus
ENSMMUG00000016838	CHD5	93	76.238	ENSMZEG00005000841	chd5	91	81.541	Maylandia_zebra
ENSMMUG00000016838	CHD5	99	88.366	ENSMGAG00000001055	CHD5	99	88.211	Meleagris_gallopavo
ENSMMUG00000016838	CHD5	99	92.802	ENSMICG00000017862	CHD5	99	92.802	Microcebus_murinus
ENSMMUG00000016838	CHD5	99	94.964	ENSMOCG00000011049	Chd5	99	94.813	Microtus_ochrogaster
ENSMMUG00000016838	CHD5	87	80.460	ENSMODG00000006294	CHD5	79	94.342	Monodelphis_domestica
ENSMMUG00000016838	CHD5	93	79.169	ENSMALG00000002831	chd5	97	78.090	Monopterus_albus
ENSMMUG00000016838	CHD5	99	94.805	MGP_CAROLIEiJ_G0026857	Chd5	99	94.813	Mus_caroli
ENSMMUG00000016838	CHD5	99	94.295	ENSMUSG00000005045	Chd5	99	94.200	Mus_musculus
ENSMMUG00000016838	CHD5	99	94.597	MGP_PahariEiJ_G0029205	Chd5	99	94.606	Mus_pahari
ENSMMUG00000016838	CHD5	99	94.597	MGP_SPRETEiJ_G0027850	Chd5	99	94.606	Mus_spretus
ENSMMUG00000016838	CHD5	99	93.109	ENSMPUG00000007122	CHD5	97	95.410	Mustela_putorius_furo
ENSMMUG00000016838	CHD5	99	94.704	ENSNGAG00000019812	Chd5	97	93.888	Nannospalax_galili
ENSMMUG00000016838	CHD5	99	96.985	ENSNLEG00000010320	CHD5	100	96.783	Nomascus_leucogenys
ENSMMUG00000016838	CHD5	86	90.494	ENSOPRG00000004304	CHD5	87	90.421	Ochotona_princeps
ENSMMUG00000016838	CHD5	99	95.485	ENSODEG00000010262	CHD5	100	95.485	Octodon_degus
ENSMMUG00000016838	CHD5	93	78.498	ENSONIG00000000619	chd5	93	78.325	Oreochromis_niloticus
ENSMMUG00000016838	CHD5	96	73.528	ENSOANG00000001819	CHD5	98	72.997	Ornithorhynchus_anatinus
ENSMMUG00000016838	CHD5	99	94.966	ENSOGAG00000005703	CHD5	99	94.966	Otolemur_garnettii
ENSMMUG00000016838	CHD5	100	94.938	ENSOARG00000013425	CHD5	100	94.938	Ovis_aries
ENSMMUG00000016838	CHD5	99	99.222	ENSPPAG00000034048	CHD5	100	99.222	Pan_paniscus
ENSMMUG00000016838	CHD5	99	95.745	ENSPPRG00000009453	CHD5	99	95.745	Panthera_pardus
ENSMMUG00000016838	CHD5	99	88.804	ENSPTIG00000013926	CHD5	99	88.764	Panthera_tigris_altaica
ENSMMUG00000016838	CHD5	99	99.222	ENSPTRG00000000075	CHD5	99	99.222	Pan_troglodytes
ENSMMUG00000016838	CHD5	99	99.741	ENSPANG00000006765	CHD5	99	99.741	Papio_anubis
ENSMMUG00000016838	CHD5	96	78.071	ENSPKIG00000004282	chd5	93	91.943	Paramormyrops_kingsleyae
ENSMMUG00000016838	CHD5	95	83.316	ENSPSIG00000006414	CHD5	99	83.616	Pelodiscus_sinensis
ENSMMUG00000016838	CHD5	69	96.547	ENSPEMG00000014799	Chd5	100	96.602	Peromyscus_maniculatus_bairdii
ENSMMUG00000016838	CHD5	99	92.239	ENSPCIG00000028310	CHD5	98	91.568	Phascolarctos_cinereus
ENSMMUG00000016838	CHD5	93	77.729	ENSPLAG00000005343	chd5	99	76.649	Poecilia_latipinna
ENSMMUG00000016838	CHD5	99	93.669	ENSPPYG00000001952	CHD5	99	96.887	Pongo_abelii
ENSMMUG00000016838	CHD5	99	97.510	ENSPCOG00000022930	CHD5	99	97.510	Propithecus_coquereli
ENSMMUG00000016838	CHD5	94	78.221	ENSPNYG00000003183	chd5	97	77.772	Pundamilia_nyererei
ENSMMUG00000016838	CHD5	99	94.961	ENSRNOG00000011268	Chd5	99	94.813	Rattus_norvegicus
ENSMMUG00000016838	CHD5	100	96.206	ENSRBIG00000032140	CHD5	96	99.231	Rhinopithecus_bieti
ENSMMUG00000016838	CHD5	99	99.429	ENSRROG00000041146	CHD5	99	99.429	Rhinopithecus_roxellana
ENSMMUG00000016838	CHD5	99	94.462	ENSSBOG00000001955	CHD5	100	98.872	Saimiri_boliviensis_boliviensis
ENSMMUG00000016838	CHD5	97	86.589	ENSSHAG00000018641	CHD5	99	86.589	Sarcophilus_harrisii
ENSMMUG00000016838	CHD5	89	87.983	ENSSFOG00015006296	chd5	90	92.417	Scleropages_formosus
ENSMMUG00000016838	CHD5	94	78.873	ENSSDUG00000017526	chd5	92	90.995	Seriola_dumerili
ENSMMUG00000016838	CHD5	98	81.363	ENSSPUG00000010622	CHD5	99	80.434	Sphenodon_punctatus
ENSMMUG00000016838	CHD5	99	96.523	ENSSSCG00000003366	CHD5	100	97.028	Sus_scrofa
ENSMMUG00000016838	CHD5	93	85.517	ENSTGUG00000002634	-	100	85.286	Taeniopygia_guttata
ENSMMUG00000016838	CHD5	53	80.784	ENSTNIG00000004346	chd5	99	81.354	Tetraodon_nigroviridis
ENSMMUG00000016838	CHD5	98	95.178	ENSTTRG00000010468	CHD5	99	95.200	Tursiops_truncatus
ENSMMUG00000016838	CHD5	99	96.071	ENSUAMG00000024509	CHD5	100	96.071	Ursus_americanus
ENSMMUG00000016838	CHD5	99	91.300	ENSUMAG00000024173	CHD5	100	91.300	Ursus_maritimus
ENSMMUG00000016838	CHD5	99	95.641	ENSVVUG00000026480	CHD5	98	95.636	Vulpes_vulpes
ENSMMUG00000016838	CHD5	96	81.029	ENSXETG00000002904	chd5	99	80.341	Xenopus_tropicalis
ENSMMUG00000016838	CHD5	57	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus