EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000017025 (Gene tree)
Gene ID: 703196
Gene Symbol: ZC3H13
Alias: DKFZp434D1812|KIAA0853|Xio
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 97528 bases
Position: chr17:25133276-25230803
Accession: 703196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000055647	zf-CCCH	PF00642.24	9.8e-07	1	1
ENSMMUP00000022408	zf-CCCH	PF00642.24	1e-06	1	1
ENSMMUP00000042849	zf-CCCH	PF00642.24	1.1e-06	1	1
ENSMMUP00000022404	zf-CCCH	PF00642.24	1.1e-06	1	1
ENSMMUP00000043705	zf-CCCH	PF00642.24	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000056727	ZC3H13-203	4923	-	ENSMMUP00000042849	1640 (aa)	-	A0A1D5Q486
ENSMMUT00000023934	ZC3H13-202	5103	XM_015121025	ENSMMUP00000022404	1697 (aa)	XP_014976511	F7HQZ5
ENSMMUT00000023939	ZC3H13-204	6670	XM_015121037	ENSMMUP00000022408	1564 (aa)	XP_014976523	F7HQY8
ENSMMUT00000068202	ZC3H13-205	4569	-	ENSMMUP00000055647	1522 (aa)	-	A0A1D5R5Q9
ENSMMUT00000056207	ZC3H13-201	6564	XM_015121033	ENSMMUP00000043705	1668 (aa)	XP_014976519	A0A1D5Q6N9

Gene Model

Click here to download ENSMMUG00000017025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000017025's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000017025	ZC3H13	100	98.529	ENSG00000123200	ZC3H13	100	99.130	Homo_sapiens
ENSMMUG00000017025	ZC3H13	72	81.368	ENSAPLG00000002707	ZC3H13	65	78.201	Anas_platyrhynchos
ENSMMUG00000017025	ZC3H13	100	97.302	ENSANAG00000033079	ZC3H13	100	97.302	Aotus_nancymaae
ENSMMUG00000017025	ZC3H13	100	96.824	ENSCJAG00000016756	ZC3H13	100	96.824	Callithrix_jacchus
ENSMMUG00000017025	ZC3H13	53	96.032	ENSCCAG00000032728	ZC3H13	54	93.764	Cebus_capucinus
ENSMMUG00000017025	ZC3H13	100	99.640	ENSCATG00000041075	ZC3H13	100	99.640	Cercocebus_atys
ENSMMUG00000017025	ZC3H13	100	99.281	ENSCSAG00000017764	ZC3H13	100	99.281	Chlorocebus_sabaeus
ENSMMUG00000017025	ZC3H13	89	95.575	ENSCHOG00000009724	ZC3H13	66	95.575	Choloepus_hoffmanni
ENSMMUG00000017025	ZC3H13	100	99.233	ENSCANG00000037422	ZC3H13	100	99.233	Colobus_angolensis_palliatus
ENSMMUG00000017025	ZC3H13	53	79.682	ENSCGRG00001014490	Zc3h13	80	88.100	Cricetulus_griseus_chok1gshd
ENSMMUG00000017025	ZC3H13	53	79.773	ENSCGRG00000002575	Zc3h13	80	88.100	Cricetulus_griseus_crigri
ENSMMUG00000017025	ZC3H13	85	50.481	ENSGACG00000015166	zc3h13	74	53.497	Gasterosteus_aculeatus
ENSMMUG00000017025	ZC3H13	100	98.261	ENSGGOG00000005496	ZC3H13	100	98.261	Gorilla_gorilla
ENSMMUG00000017025	ZC3H13	69	64.748	ENSKMAG00000010701	zc3h13	62	46.248	Kryptolebias_marmoratus
ENSMMUG00000017025	ZC3H13	89	62.181	ENSLACG00000003806	ZC3H13	58	63.881	Latimeria_chalumnae
ENSMMUG00000017025	ZC3H13	100	100.000	ENSMFAG00000004060	ZC3H13	100	100.000	Macaca_fascicularis
ENSMMUG00000017025	ZC3H13	100	99.940	ENSMNEG00000044356	ZC3H13	100	99.940	Macaca_nemestrina
ENSMMUG00000017025	ZC3H13	100	96.283	ENSMLEG00000039387	ZC3H13	100	96.283	Mandrillus_leucophaeus
ENSMMUG00000017025	ZC3H13	60	45.632	ENSMAMG00000022274	zc3h13	64	45.740	Mastacembelus_armatus
ENSMMUG00000017025	ZC3H13	100	98.274	ENSNLEG00000002498	ZC3H13	100	98.274	Nomascus_leucogenys
ENSMMUG00000017025	ZC3H13	100	98.561	ENSPTRG00000005851	ZC3H13	100	98.561	Pan_troglodytes
ENSMMUG00000017025	ZC3H13	100	98.981	ENSPANG00000014127	ZC3H13	100	98.981	Papio_anubis
ENSMMUG00000017025	ZC3H13	82	96.774	ENSPCAG00000001146	ZC3H13	70	94.758	Procavia_capensis
ENSMMUG00000017025	ZC3H13	80	92.655	ENSPVAG00000012353	ZC3H13	83	85.897	Pteropus_vampyrus
ENSMMUG00000017025	ZC3H13	100	98.621	ENSRBIG00000010463	ZC3H13	100	98.621	Rhinopithecus_bieti
ENSMMUG00000017025	ZC3H13	100	97.066	ENSSBOG00000027228	ZC3H13	100	97.066	Saimiri_boliviensis_boliviensis
ENSMMUG00000017025	ZC3H13	69	53.461	ENSTNIG00000014523	zc3h13	54	56.667	Tetraodon_nigroviridis
ENSMMUG00000017025	ZC3H13	54	85.973	ENSUMAG00000016220	ZC3H13	50	95.294	Ursus_maritimus
ENSMMUG00000017025	ZC3H13	84	93.636	ENSVPAG00000005179	ZC3H13	61	93.636	Vicugna_pacos
ENSMMUG00000017025	ZC3H13	76	62.483	ENSXETG00000014637	zc3h13	99	64.120	Xenopus_tropicalis