EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000018094 (Gene tree)
Gene ID: 720965
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 10067 bases
Position: chr12:113945889-113955955
Accession: 720965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000023785	RRM_1	PF00076.22	5.4e-58	1	4
ENSMMUP00000023785	RRM_1	PF00076.22	5.4e-58	2	4
ENSMMUP00000023785	RRM_1	PF00076.22	5.4e-58	3	4
ENSMMUP00000023785	RRM_1	PF00076.22	5.4e-58	4	4
ENSMMUP00000023786	RRM_1	PF00076.22	8.4e-40	1	2
ENSMMUP00000023786	RRM_1	PF00076.22	8.4e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000025424	NCL-202	1470	-	ENSMMUP00000023786	489 (aa)	-	H9H3Z5
ENSMMUT00000025423	NCL-201	2813	XM_015111344	ENSMMUP00000023785	711 (aa)	XP_014966830	H9H3Z4

Gene Model

Click here to download ENSMMUG00000018094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000018094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000018094	NCL	99	100.000	ENSG00000115053	NCL	100	98.734	Homo_sapiens
ENSMMUG00000018094	NCL	62	97.494	ENSAMEG00000016289	NCL	92	89.833	Ailuropoda_melanoleuca
ENSMMUG00000018094	NCL	99	77.181	ENSANAG00000024378	-	85	88.636	Aotus_nancymaae
ENSMMUG00000018094	NCL	100	96.218	ENSANAG00000035814	-	100	96.218	Aotus_nancymaae
ENSMMUG00000018094	NCL	94	85.714	ENSBTAG00000016174	NCL	92	86.937	Bos_taurus
ENSMMUG00000018094	NCL	88	79.767	ENSBTAG00000026909	-	95	92.642	Bos_taurus
ENSMMUG00000018094	NCL	92	90.164	ENSBTAG00000050728	-	85	90.164	Bos_taurus
ENSMMUG00000018094	NCL	89	92.157	ENSBTAG00000051320	-	73	90.141	Bos_taurus
ENSMMUG00000018094	NCL	92	88.906	ENSCJAG00000013538	NCL	100	100.000	Callithrix_jacchus
ENSMMUG00000018094	NCL	100	91.074	ENSCAFG00000011037	NCL	92	90.563	Canis_familiaris
ENSMMUG00000018094	NCL	84	90.066	ENSCAFG00020023145	NCL	87	90.404	Canis_lupus_dingo
ENSMMUG00000018094	NCL	92	81.003	ENSCHIG00000026149	-	93	80.091	Capra_hircus
ENSMMUG00000018094	NCL	100	84.646	ENSCHIG00000021052	-	94	96.503	Capra_hircus
ENSMMUG00000018094	NCL	92	63.497	ENSCHIG00000012143	-	92	72.012	Capra_hircus
ENSMMUG00000018094	NCL	85	86.949	ENSCHIG00000010894	-	98	88.012	Capra_hircus
ENSMMUG00000018094	NCL	92	89.771	ENSTSYG00000004355	-	92	89.618	Carlito_syrichta
ENSMMUG00000018094	NCL	95	87.500	ENSTSYG00000029779	-	98	86.919	Carlito_syrichta
ENSMMUG00000018094	NCL	90	75.156	ENSTSYG00000036886	-	91	75.613	Carlito_syrichta
ENSMMUG00000018094	NCL	93	97.500	ENSCAPG00000009405	NCL	91	79.294	Cavia_aperea
ENSMMUG00000018094	NCL	95	97.500	ENSCPOG00000001034	NCL	92	82.827	Cavia_porcellus
ENSMMUG00000018094	NCL	81	77.975	ENSCCAG00000000551	-	93	78.385	Cebus_capucinus
ENSMMUG00000018094	NCL	100	95.670	ENSCCAG00000021040	-	100	95.670	Cebus_capucinus
ENSMMUG00000018094	NCL	100	99.719	ENSCATG00000037033	NCL	100	99.719	Cercocebus_atys
ENSMMUG00000018094	NCL	95	97.500	ENSCLAG00000013080	NCL	92	85.106	Chinchilla_lanigera
ENSMMUG00000018094	NCL	62	99.773	ENSCSAG00000006660	NCL	95	99.773	Chlorocebus_sabaeus
ENSMMUG00000018094	NCL	61	74.886	ENSCHOG00000012860	NCL	88	75.000	Choloepus_hoffmanni
ENSMMUG00000018094	NCL	62	100.000	ENSCANG00000036756	NCL	94	100.000	Colobus_angolensis_palliatus
ENSMMUG00000018094	NCL	85	79.098	ENSCGRG00001022350	-	95	67.016	Cricetulus_griseus_chok1gshd
ENSMMUG00000018094	NCL	92	83.257	ENSCGRG00001024315	-	91	82.648	Cricetulus_griseus_chok1gshd
ENSMMUG00000018094	NCL	92	66.968	ENSCGRG00000000507	-	93	65.367	Cricetulus_griseus_crigri
ENSMMUG00000018094	NCL	85	83.361	ENSCGRG00000017894	-	78	94.091	Cricetulus_griseus_crigri
ENSMMUG00000018094	NCL	92	85.888	ENSDNOG00000010783	-	92	85.584	Dasypus_novemcinctus
ENSMMUG00000018094	NCL	100	74.234	ENSDNOG00000046347	-	99	73.538	Dasypus_novemcinctus
ENSMMUG00000018094	NCL	57	69.286	ENSDORG00000023596	-	92	70.108	Dipodomys_ordii
ENSMMUG00000018094	NCL	92	76.805	ENSDORG00000012513	-	91	78.681	Dipodomys_ordii
ENSMMUG00000018094	NCL	53	90.789	ENSETEG00000018937	-	85	81.281	Echinops_telfairi
ENSMMUG00000018094	NCL	62	61.937	ENSETEG00000008553	-	88	62.077	Echinops_telfairi
ENSMMUG00000018094	NCL	72	69.048	ENSETEG00000008139	-	89	66.757	Echinops_telfairi
ENSMMUG00000018094	NCL	53	90.451	ENSETEG00000014756	-	86	90.501	Echinops_telfairi
ENSMMUG00000018094	NCL	97	90.737	ENSEASG00005008488	NCL	100	90.737	Equus_asinus_asinus
ENSMMUG00000018094	NCL	100	89.722	ENSECAG00000021868	NCL	92	88.485	Equus_caballus
ENSMMUG00000018094	NCL	85	82.013	ENSEEUG00000005913	NCL	85	82.867	Erinaceus_europaeus
ENSMMUG00000018094	NCL	100	91.226	ENSFCAG00000027622	NCL	92	90.274	Felis_catus
ENSMMUG00000018094	NCL	93	97.857	ENSFDAG00000014291	NCL	92	88.290	Fukomys_damarensis
ENSMMUG00000018094	NCL	99	100.000	ENSGGOG00000004300	NCL	100	98.965	Gorilla_gorilla
ENSMMUG00000018094	NCL	91	77.385	ENSHGLG00000011069	-	92	78.407	Heterocephalus_glaber_female
ENSMMUG00000018094	NCL	95	97.857	ENSHGLG00000002031	-	92	86.260	Heterocephalus_glaber_female
ENSMMUG00000018094	NCL	87	66.432	ENSHGLG00000005133	-	93	74.825	Heterocephalus_glaber_female
ENSMMUG00000018094	NCL	83	83.916	ENSHGLG00100000745	-	82	85.942	Heterocephalus_glaber_male
ENSMMUG00000018094	NCL	95	97.500	ENSHGLG00100014537	-	100	86.853	Heterocephalus_glaber_male
ENSMMUG00000018094	NCL	96	88.732	ENSJJAG00000016165	Ncl	93	78.995	Jaculus_jaculus
ENSMMUG00000018094	NCL	91	75.038	ENSLAFG00000013061	NCL	91	74.504	Loxodonta_africana
ENSMMUG00000018094	NCL	100	100.000	ENSMFAG00000040385	NCL	100	100.000	Macaca_fascicularis
ENSMMUG00000018094	NCL	98	100.000	ENSMNEG00000023839	NCL	100	100.000	Macaca_nemestrina
ENSMMUG00000018094	NCL	100	99.859	ENSMLEG00000028935	NCL	100	99.859	Mandrillus_leucophaeus
ENSMMUG00000018094	NCL	92	73.047	ENSMICG00000029975	-	86	82.979	Microcebus_murinus
ENSMMUG00000018094	NCL	100	91.292	ENSMICG00000002538	-	92	88.804	Microcebus_murinus
ENSMMUG00000018094	NCL	92	78.267	MGP_CAROLIEiJ_G0014362	Ncl	92	79.331	Mus_caroli
ENSMMUG00000018094	NCL	93	86.319	ENSMUSG00000026234	Ncl	92	80.091	Mus_musculus
ENSMMUG00000018094	NCL	91	85.902	MGP_PahariEiJ_G0027599	Ncl	92	78.485	Mus_pahari
ENSMMUG00000018094	NCL	97	86.319	MGP_SPRETEiJ_G0015164	Ncl	92	78.604	Mus_spretus
ENSMMUG00000018094	NCL	100	92.532	ENSMLUG00000014547	NCL	92	87.234	Myotis_lucifugus
ENSMMUG00000018094	NCL	75	75.373	ENSNGAG00000006188	-	54	72.559	Nannospalax_galili
ENSMMUG00000018094	NCL	92	80.451	ENSNGAG00000002454	-	91	80.572	Nannospalax_galili
ENSMMUG00000018094	NCL	85	82.418	ENSNLEG00000014107	-	95	85.872	Nomascus_leucogenys
ENSMMUG00000018094	NCL	91	81.957	ENSODEG00000003281	-	91	79.421	Octodon_degus
ENSMMUG00000018094	NCL	99	67.384	ENSODEG00000007803	-	90	67.263	Octodon_degus
ENSMMUG00000018094	NCL	82	94.037	ENSODEG00000002748	-	91	77.642	Octodon_degus
ENSMMUG00000018094	NCL	100	69.325	ENSODEG00000002441	-	84	85.593	Octodon_degus
ENSMMUG00000018094	NCL	95	95.714	ENSOCUG00000004312	NCL	100	80.926	Oryctolagus_cuniculus
ENSMMUG00000018094	NCL	91	91.093	ENSOGAG00000027852	NCL	58	99.545	Otolemur_garnettii
ENSMMUG00000018094	NCL	91	83.333	ENSOARG00000020709	-	92	81.212	Ovis_aries
ENSMMUG00000018094	NCL	88	85.567	ENSOARG00000013270	-	100	90.110	Ovis_aries
ENSMMUG00000018094	NCL	72	78.855	ENSOARG00000004072	-	92	70.169	Ovis_aries
ENSMMUG00000018094	NCL	70	89.749	ENSOARG00000013710	-	94	77.614	Ovis_aries
ENSMMUG00000018094	NCL	100	99.017	ENSPPAG00000011619	NCL	100	99.172	Pan_paniscus
ENSMMUG00000018094	NCL	100	90.934	ENSPPRG00000012603	NCL	92	89.802	Panthera_pardus
ENSMMUG00000018094	NCL	91	89.862	ENSPTIG00000010393	NCL	91	89.555	Panthera_tigris_altaica
ENSMMUG00000018094	NCL	99	100.000	ENSPTRG00000013025	NCL	100	98.965	Pan_troglodytes
ENSMMUG00000018094	NCL	100	100.000	ENSPANG00000010292	NCL	100	100.000	Papio_anubis
ENSMMUG00000018094	NCL	99	100.000	ENSPPYG00000013265	NCL	92	90.715	Pongo_abelii
ENSMMUG00000018094	NCL	91	93.548	ENSPCOG00000004160	-	94	93.636	Propithecus_coquereli
ENSMMUG00000018094	NCL	91	98.182	ENSPCOG00000003051	-	91	91.284	Propithecus_coquereli
ENSMMUG00000018094	NCL	92	88.737	ENSPVAG00000000297	NCL	100	88.563	Pteropus_vampyrus
ENSMMUG00000018094	NCL	92	79.305	ENSRNOG00000018273	Ncl	92	79.607	Rattus_norvegicus
ENSMMUG00000018094	NCL	72	99.077	ENSRBIG00000035396	-	93	99.077	Rhinopithecus_bieti
ENSMMUG00000018094	NCL	100	93.539	ENSRBIG00000037525	-	91	93.088	Rhinopithecus_bieti
ENSMMUG00000018094	NCL	99	98.561	ENSRROG00000036103	-	99	97.557	Rhinopithecus_roxellana
ENSMMUG00000018094	NCL	100	99.017	ENSRROG00000028756	-	100	99.165	Rhinopithecus_roxellana
ENSMMUG00000018094	NCL	86	92.857	ENSSBOG00000027549	-	98	90.888	Saimiri_boliviensis_boliviensis
ENSMMUG00000018094	NCL	92	93.578	ENSSBOG00000029193	-	92	94.495	Saimiri_boliviensis_boliviensis
ENSMMUG00000018094	NCL	86	73.747	ENSSBOG00000023094	-	89	72.209	Saimiri_boliviensis_boliviensis
ENSMMUG00000018094	NCL	92	87.087	ENSSSCG00000016275	NCL	92	88.138	Sus_scrofa
ENSMMUG00000018094	NCL	65	90.722	ENSTBEG00000001546	-	85	81.773	Tupaia_belangeri
ENSMMUG00000018094	NCL	80	76.786	ENSTBEG00000002469	-	66	82.286	Tupaia_belangeri
ENSMMUG00000018094	NCL	100	96.454	ENSTTRG00000009094	NCL	91	89.587	Tursiops_truncatus
ENSMMUG00000018094	NCL	77	98.929	ENSUAMG00000005639	NCL	100	94.036	Ursus_americanus
ENSMMUG00000018094	NCL	62	97.494	ENSUMAG00000015789	NCL	92	90.382	Ursus_maritimus
ENSMMUG00000018094	NCL	86	88.732	ENSVPAG00000001796	NCL	69	88.732	Vicugna_pacos
ENSMMUG00000018094	NCL	94	99.640	ENSVVUG00000025564	NCL	100	87.692	Vulpes_vulpes