EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000018458 (Gene tree)
Gene ID: 717603
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 86653 bases
Position: chr1:183749012-183835664
Accession: 717603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000037897	EST1	PF10374.9	1.1e-24	1	1
ENSMMUP00000037894	EST1	PF10374.9	1.2e-24	1	1
ENSMMUP00000024282	EST1	PF10374.9	1.2e-24	1	1
ENSMMUP00000060627	EST1	PF10374.9	1.2e-24	1	1
ENSMMUP00000037897	EST1_DNA_bind	PF10373.9	1.3e-55	1	1
ENSMMUP00000037894	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSMMUP00000024282	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSMMUP00000060627	EST1_DNA_bind	PF10373.9	1.4e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000076466	SMG7-203	3561	XM_015122135	ENSMMUP00000060627	1186 (aa)	XP_014977621	A0A1D5RJY3
ENSMMUT00000044874	SMG7-204	3411	XM_002802023	ENSMMUP00000037897	1136 (aa)	XP_002802069	F7C550
ENSMMUT00000025950	SMG7-201	3537	XM_015122083	ENSMMUP00000024282	1178 (aa)	XP_014977569	F7HCS2
ENSMMUT00000044871	SMG7-202	3513	XM_002802022	ENSMMUP00000037894	1170 (aa)	XP_002802068	F7C572

Gene Model

Click here to download ENSMMUG00000018458's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000018458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000018458	SMG7	100	99.487	ENSG00000116698	SMG7	100	100.000	Homo_sapiens
ENSMMUG00000018458	SMG7	88	73.516	ENSAPOG00000009611	smg7	95	73.516	Acanthochromis_polyacanthus
ENSMMUG00000018458	SMG7	99	96.619	ENSAMEG00000002357	SMG7	100	97.031	Ailuropoda_melanoleuca
ENSMMUG00000018458	SMG7	97	64.439	ENSACIG00000015152	smg7	100	65.062	Amphilophus_citrinellus
ENSMMUG00000018458	SMG7	99	65.461	ENSAOCG00000013538	smg7	99	65.982	Amphiprion_ocellaris
ENSMMUG00000018458	SMG7	99	65.325	ENSAPEG00000007851	smg7	99	65.846	Amphiprion_percula
ENSMMUG00000018458	SMG7	99	64.936	ENSATEG00000006931	smg7	99	65.447	Anabas_testudineus
ENSMMUG00000018458	SMG7	99	89.115	ENSAPLG00000015811	SMG7	99	88.938	Anas_platyrhynchos
ENSMMUG00000018458	SMG7	99	87.048	ENSACAG00000014989	SMG7	99	87.553	Anolis_carolinensis
ENSMMUG00000018458	SMG7	100	97.793	ENSANAG00000028114	SMG7	99	97.964	Aotus_nancymaae
ENSMMUG00000018458	SMG7	99	64.542	ENSACLG00000022079	smg7	99	65.486	Astatotilapia_calliptera
ENSMMUG00000018458	SMG7	99	67.168	ENSAMXG00000020809	smg7	99	67.446	Astyanax_mexicanus
ENSMMUG00000018458	SMG7	100	96.581	ENSBTAG00000008003	SMG7	100	96.581	Bos_taurus
ENSMMUG00000018458	SMG7	100	97.878	ENSCJAG00000005135	SMG7	100	98.542	Callithrix_jacchus
ENSMMUG00000018458	SMG7	100	97.436	ENSCAFG00000013276	SMG7	100	97.436	Canis_familiaris
ENSMMUG00000018458	SMG7	100	97.436	ENSCAFG00020015475	SMG7	100	97.436	Canis_lupus_dingo
ENSMMUG00000018458	SMG7	97	96.558	ENSCHIG00000018192	SMG7	99	96.558	Capra_hircus
ENSMMUG00000018458	SMG7	100	97.436	ENSTSYG00000002667	SMG7	100	97.436	Carlito_syrichta
ENSMMUG00000018458	SMG7	99	97.770	ENSCPOG00000008906	SMG7	100	97.770	Cavia_porcellus
ENSMMUG00000018458	SMG7	99	97.963	ENSCCAG00000028596	SMG7	100	98.865	Cebus_capucinus
ENSMMUG00000018458	SMG7	100	100.000	ENSCATG00000011063	SMG7	100	100.000	Cercocebus_atys
ENSMMUG00000018458	SMG7	100	97.436	ENSCLAG00000010751	SMG7	100	97.436	Chinchilla_lanigera
ENSMMUG00000018458	SMG7	100	99.829	ENSCSAG00000012654	SMG7	100	99.829	Chlorocebus_sabaeus
ENSMMUG00000018458	SMG7	95	88.272	ENSCHOG00000010522	SMG7	99	88.630	Choloepus_hoffmanni
ENSMMUG00000018458	SMG7	99	91.547	ENSCPBG00000015724	SMG7	99	91.378	Chrysemys_picta_bellii
ENSMMUG00000018458	SMG7	99	98.940	ENSCANG00000015680	SMG7	100	99.913	Colobus_angolensis_palliatus
ENSMMUG00000018458	SMG7	99	96.312	ENSCGRG00001013705	Smg7	100	96.312	Cricetulus_griseus_chok1gshd
ENSMMUG00000018458	SMG7	98	96.258	ENSCGRG00000018401	Smg7	100	96.258	Cricetulus_griseus_crigri
ENSMMUG00000018458	SMG7	95	69.000	ENSCVAG00000011842	smg7	99	69.000	Cyprinodon_variegatus
ENSMMUG00000018458	SMG7	99	67.139	ENSDARG00000060767	smg7	99	67.027	Danio_rerio
ENSMMUG00000018458	SMG7	98	96.780	ENSDORG00000007331	Smg7	100	96.780	Dipodomys_ordii
ENSMMUG00000018458	SMG7	94	96.286	ENSETEG00000002654	SMG7	100	96.286	Echinops_telfairi
ENSMMUG00000018458	SMG7	100	97.949	ENSEASG00005006524	SMG7	100	97.949	Equus_asinus_asinus
ENSMMUG00000018458	SMG7	100	98.034	ENSECAG00000004313	SMG7	100	98.034	Equus_caballus
ENSMMUG00000018458	SMG7	99	93.878	ENSEEUG00000002024	SMG7	99	93.878	Erinaceus_europaeus
ENSMMUG00000018458	SMG7	99	65.404	ENSELUG00000010293	smg7	99	65.926	Esox_lucius
ENSMMUG00000018458	SMG7	99	97.690	ENSFCAG00000010900	SMG7	100	97.690	Felis_catus
ENSMMUG00000018458	SMG7	98	86.371	ENSFALG00000003047	SMG7	99	86.286	Ficedula_albicollis
ENSMMUG00000018458	SMG7	97	97.436	ENSFDAG00000012121	SMG7	99	97.326	Fukomys_damarensis
ENSMMUG00000018458	SMG7	99	63.824	ENSFHEG00000011073	smg7	99	63.365	Fundulus_heteroclitus
ENSMMUG00000018458	SMG7	82	72.571	ENSGMOG00000004916	smg7	88	72.710	Gadus_morhua
ENSMMUG00000018458	SMG7	99	88.644	ENSGALG00000004667	SMG7	99	88.468	Gallus_gallus
ENSMMUG00000018458	SMG7	99	63.872	ENSGAFG00000019000	smg7	99	63.699	Gambusia_affinis
ENSMMUG00000018458	SMG7	94	64.592	ENSGACG00000001634	smg7	99	65.061	Gasterosteus_aculeatus
ENSMMUG00000018458	SMG7	100	99.316	ENSGGOG00000002342	SMG7	100	99.389	Gorilla_gorilla
ENSMMUG00000018458	SMG7	99	65.128	ENSHBUG00000003726	smg7	97	72.589	Haplochromis_burtoni
ENSMMUG00000018458	SMG7	99	96.457	ENSHGLG00000009353	SMG7	100	97.415	Heterocephalus_glaber_female
ENSMMUG00000018458	SMG7	99	96.546	ENSHGLG00100009637	-	100	95.722	Heterocephalus_glaber_male
ENSMMUG00000018458	SMG7	97	89.232	ENSHGLG00100004878	-	99	89.232	Heterocephalus_glaber_male
ENSMMUG00000018458	SMG7	99	67.839	ENSIPUG00000016997	smg7	99	67.896	Ictalurus_punctatus
ENSMMUG00000018458	SMG7	98	98.346	ENSSTOG00000000401	SMG7	100	98.346	Ictidomys_tridecemlineatus
ENSMMUG00000018458	SMG7	97	95.587	ENSJJAG00000012351	Smg7	99	95.587	Jaculus_jaculus
ENSMMUG00000018458	SMG7	97	62.423	ENSKMAG00000004900	smg7	97	70.500	Kryptolebias_marmoratus
ENSMMUG00000018458	SMG7	99	65.714	ENSLBEG00000002983	smg7	99	65.887	Labrus_bergylta
ENSMMUG00000018458	SMG7	52	63.000	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSMMUG00000018458	SMG7	99	74.934	ENSLACG00000000972	SMG7	99	75.847	Latimeria_chalumnae
ENSMMUG00000018458	SMG7	100	68.905	ENSLOCG00000002010	smg7	99	69.154	Lepisosteus_oculatus
ENSMMUG00000018458	SMG7	98	97.389	ENSLAFG00000008186	SMG7	100	97.389	Loxodonta_africana
ENSMMUG00000018458	SMG7	100	99.915	ENSMFAG00000031653	SMG7	100	99.915	Macaca_fascicularis
ENSMMUG00000018458	SMG7	99	99.114	ENSMNEG00000034798	SMG7	100	100.000	Macaca_nemestrina
ENSMMUG00000018458	SMG7	100	100.000	ENSMLEG00000037170	SMG7	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000018458	SMG7	88	64.352	ENSMAMG00000018733	smg7	84	66.102	Mastacembelus_armatus
ENSMMUG00000018458	SMG7	99	64.996	ENSMZEG00005015247	smg7	99	65.078	Maylandia_zebra
ENSMMUG00000018458	SMG7	97	88.729	ENSMGAG00000001561	SMG7	97	88.548	Meleagris_gallopavo
ENSMMUG00000018458	SMG7	98	96.693	ENSMAUG00000019484	Smg7	100	96.693	Mesocricetus_auratus
ENSMMUG00000018458	SMG7	99	97.520	ENSMICG00000007145	SMG7	100	98.346	Microcebus_murinus
ENSMMUG00000018458	SMG7	98	96.519	ENSMOCG00000020748	Smg7	100	96.519	Microtus_ochrogaster
ENSMMUG00000018458	SMG7	99	63.652	ENSMMOG00000001524	smg7	99	63.944	Mola_mola
ENSMMUG00000018458	SMG7	91	93.263	ENSMODG00000007139	SMG7	98	93.263	Monodelphis_domestica
ENSMMUG00000018458	SMG7	96	68.159	ENSMALG00000000061	smg7	95	68.159	Monopterus_albus
ENSMMUG00000018458	SMG7	98	96.258	MGP_CAROLIEiJ_G0014704	Smg7	100	96.258	Mus_caroli
ENSMMUG00000018458	SMG7	98	96.171	ENSMUSG00000042772	Smg7	100	96.171	Mus_musculus
ENSMMUG00000018458	SMG7	98	96.258	MGP_PahariEiJ_G0027940	Smg7	100	96.258	Mus_pahari
ENSMMUG00000018458	SMG7	98	96.258	MGP_SPRETEiJ_G0015511	Smg7	100	96.258	Mus_spretus
ENSMMUG00000018458	SMG7	96	97.415	ENSMPUG00000011732	SMG7	97	97.415	Mustela_putorius_furo
ENSMMUG00000018458	SMG7	97	96.823	ENSMLUG00000015417	SMG7	99	96.823	Myotis_lucifugus
ENSMMUG00000018458	SMG7	98	96.693	ENSNGAG00000009836	Smg7	100	96.693	Nannospalax_galili
ENSMMUG00000018458	SMG7	98	61.391	ENSNBRG00000024343	smg7	98	70.476	Neolamprologus_brichardi
ENSMMUG00000018458	SMG7	100	99.658	ENSNLEG00000018018	SMG7	100	99.658	Nomascus_leucogenys
ENSMMUG00000018458	SMG7	81	86.704	ENSMEUG00000004681	SMG7	82	86.890	Notamacropus_eugenii
ENSMMUG00000018458	SMG7	94	84.932	ENSOPRG00000013942	SMG7	96	84.749	Ochotona_princeps
ENSMMUG00000018458	SMG7	98	97.476	ENSODEG00000010390	SMG7	100	97.476	Octodon_degus
ENSMMUG00000018458	SMG7	99	64.177	ENSONIG00000000277	smg7	99	65.154	Oreochromis_niloticus
ENSMMUG00000018458	SMG7	96	91.223	ENSOANG00000000994	SMG7	100	91.135	Ornithorhynchus_anatinus
ENSMMUG00000018458	SMG7	100	89.829	ENSOCUG00000005887	SMG7	95	90.000	Oryctolagus_cuniculus
ENSMMUG00000018458	SMG7	99	63.018	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSMMUG00000018458	SMG7	99	63.433	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSMMUG00000018458	SMG7	99	63.306	ENSORLG00015012289	smg7	99	62.975	Oryzias_latipes_hsok
ENSMMUG00000018458	SMG7	99	63.058	ENSOMEG00000002328	smg7	99	62.975	Oryzias_melastigma
ENSMMUG00000018458	SMG7	99	94.732	ENSOGAG00000003107	SMG7	100	94.647	Otolemur_garnettii
ENSMMUG00000018458	SMG7	100	96.410	ENSOARG00000001352	SMG7	100	96.410	Ovis_aries
ENSMMUG00000018458	SMG7	99	98.760	ENSPPAG00000031619	SMG7	100	99.651	Pan_paniscus
ENSMMUG00000018458	SMG7	99	97.861	ENSPPRG00000011222	SMG7	100	97.861	Panthera_pardus
ENSMMUG00000018458	SMG7	97	97.904	ENSPTIG00000007242	SMG7	100	97.904	Panthera_tigris_altaica
ENSMMUG00000018458	SMG7	100	99.066	ENSPTRG00000001764	SMG7	100	99.651	Pan_troglodytes
ENSMMUG00000018458	SMG7	100	100.000	ENSPANG00000004520	SMG7	100	100.000	Papio_anubis
ENSMMUG00000018458	SMG7	99	65.101	ENSPKIG00000007242	smg7	99	68.500	Paramormyrops_kingsleyae
ENSMMUG00000018458	SMG7	97	91.996	ENSPSIG00000012201	SMG7	99	91.733	Pelodiscus_sinensis
ENSMMUG00000018458	SMG7	71	43.632	ENSPMGG00000021833	smg7	79	70.796	Periophthalmus_magnuspinnatus
ENSMMUG00000018458	SMG7	98	95.387	ENSPEMG00000011315	Smg7	100	95.387	Peromyscus_maniculatus_bairdii
ENSMMUG00000018458	SMG7	99	93.051	ENSPCIG00000003786	SMG7	99	92.881	Phascolarctos_cinereus
ENSMMUG00000018458	SMG7	99	63.742	ENSPFOG00000019219	smg7	99	63.854	Poecilia_formosa
ENSMMUG00000018458	SMG7	99	63.990	ENSPLAG00000001446	smg7	99	63.817	Poecilia_latipinna
ENSMMUG00000018458	SMG7	96	63.247	ENSPMEG00000005218	smg7	99	63.069	Poecilia_mexicana
ENSMMUG00000018458	SMG7	87	61.022	ENSPREG00000019039	smg7	92	60.208	Poecilia_reticulata
ENSMMUG00000018458	SMG7	99	98.849	ENSPPYG00000000427	SMG7	99	98.849	Pongo_abelii
ENSMMUG00000018458	SMG7	98	84.024	ENSPCAG00000008360	SMG7	100	84.024	Procavia_capensis
ENSMMUG00000018458	SMG7	100	98.291	ENSPCOG00000011996	SMG7	100	98.291	Propithecus_coquereli
ENSMMUG00000018458	SMG7	99	85.799	ENSPVAG00000000851	SMG7	100	85.799	Pteropus_vampyrus
ENSMMUG00000018458	SMG7	99	64.988	ENSPNYG00000007643	smg7	99	65.264	Pundamilia_nyererei
ENSMMUG00000018458	SMG7	99	67.720	ENSPNAG00000011374	smg7	98	69.697	Pygocentrus_nattereri
ENSMMUG00000018458	SMG7	99	96.058	ENSRNOG00000027962	Smg7	100	96.429	Rattus_norvegicus
ENSMMUG00000018458	SMG7	100	99.829	ENSRBIG00000036316	SMG7	100	99.829	Rhinopithecus_bieti
ENSMMUG00000018458	SMG7	100	99.829	ENSRROG00000035719	SMG7	100	99.829	Rhinopithecus_roxellana
ENSMMUG00000018458	SMG7	97	98.777	ENSSBOG00000023454	SMG7	100	98.777	Saimiri_boliviensis_boliviensis
ENSMMUG00000018458	SMG7	99	93.156	ENSSHAG00000013147	SMG7	99	92.806	Sarcophilus_harrisii
ENSMMUG00000018458	SMG7	91	76.842	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSMMUG00000018458	SMG7	99	65.423	ENSSMAG00000006067	smg7	100	64.769	Scophthalmus_maximus
ENSMMUG00000018458	SMG7	95	72.500	ENSSDUG00000017543	smg7	99	65.229	Seriola_dumerili
ENSMMUG00000018458	SMG7	99	89.894	ENSSPUG00000002064	SMG7	99	89.716	Sphenodon_punctatus
ENSMMUG00000018458	SMG7	100	66.119	ENSSPAG00000008733	smg7	99	66.034	Stegastes_partitus
ENSMMUG00000018458	SMG7	100	97.521	ENSSSCG00000015558	SMG7	100	97.521	Sus_scrofa
ENSMMUG00000018458	SMG7	99	88.771	ENSTGUG00000003928	SMG7	99	88.683	Taeniopygia_guttata
ENSMMUG00000018458	SMG7	97	63.652	ENSTNIG00000002802	smg7	99	63.613	Tetraodon_nigroviridis
ENSMMUG00000018458	SMG7	78	97.034	ENSTBEG00000003220	SMG7	81	93.991	Tupaia_belangeri
ENSMMUG00000018458	SMG7	99	96.243	ENSTTRG00000014778	SMG7	100	96.243	Tursiops_truncatus
ENSMMUG00000018458	SMG7	96	93.516	ENSUAMG00000017473	SMG7	100	93.516	Ursus_americanus
ENSMMUG00000018458	SMG7	94	97.543	ENSUMAG00000016389	SMG7	100	97.543	Ursus_maritimus
ENSMMUG00000018458	SMG7	100	97.521	ENSVVUG00000008976	SMG7	100	97.521	Vulpes_vulpes
ENSMMUG00000018458	SMG7	99	70.665	ENSXETG00000012528	smg7	99	70.640	Xenopus_tropicalis
ENSMMUG00000018458	SMG7	99	63.597	ENSXMAG00000007123	smg7	99	63.769	Xiphophorus_maculatus