EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000018849 (Gene tree)
Gene ID: 712984
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 206055 bases
Position: chr20:14563644-14769698
Accession: 712984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000060095	R3H	PF01424.22	6e-05	1	1
ENSMMUP00000024806	R3H	PF01424.22	6.6e-05	1	1
ENSMMUP00000055157	RNA_bind	PF08675.11	9.2e-34	1	1
ENSMMUP00000060095	RNA_bind	PF08675.11	1.3e-33	1	1
ENSMMUP00000024806	RNA_bind	PF08675.11	1.4e-33	1	1
ENSMMUP00000024806	CAF1	PF04857.20	3.1e-89	1	1
ENSMMUP00000060095	CAF1	PF04857.20	3.4e-68	1	2
ENSMMUP00000060095	CAF1	PF04857.20	3.4e-68	2	2
ENSMMUP00000055157	CAF1	PF04857.20	1.9e-52	1	2
ENSMMUP00000055157	CAF1	PF04857.20	1.9e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000059438	PARN-203	1395	-	ENSMMUP00000055157	464 (aa)	-	A0A1D5R4C1
ENSMMUT00000026502	PARN-201	2147	XM_015125652	ENSMMUP00000024806	639 (aa)	XP_014981138	H9FV31
ENSMMUT00000067153	PARN-202	1782	-	ENSMMUP00000060095	593 (aa)	-	A0A1D5RIF1

Gene Model

Click here to download ENSMMUG00000018849's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000018849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000018849	PARN	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSMMUG00000018849	PARN	100	96.610	ENSAMEG00000011208	PARN	100	92.656	Ailuropoda_melanoleuca
ENSMMUG00000018849	PARN	83	76.679	ENSACIG00000000619	parn	83	76.679	Amphilophus_citrinellus
ENSMMUG00000018849	PARN	94	77.966	ENSAOCG00000003465	parn	84	73.604	Amphiprion_ocellaris
ENSMMUG00000018849	PARN	74	77.987	ENSAPEG00000010661	parn	91	77.987	Amphiprion_percula
ENSMMUG00000018849	PARN	92	76.271	ENSATEG00000004661	parn	88	71.659	Anabas_testudineus
ENSMMUG00000018849	PARN	99	87.037	ENSAPLG00000013914	PARN	99	85.016	Anas_platyrhynchos
ENSMMUG00000018849	PARN	100	89.831	ENSACAG00000004973	PARN	100	78.923	Anolis_carolinensis
ENSMMUG00000018849	PARN	100	100.000	ENSANAG00000031516	PARN	100	100.000	Aotus_nancymaae
ENSMMUG00000018849	PARN	89	77.966	ENSACLG00000004742	parn	85	74.199	Astatotilapia_calliptera
ENSMMUG00000018849	PARN	86	79.661	ENSAMXG00000012390	parn	92	72.696	Astyanax_mexicanus
ENSMMUG00000018849	PARN	100	98.305	ENSBTAG00000018097	PARN	100	93.426	Bos_taurus
ENSMMUG00000018849	PARN	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSMMUG00000018849	PARN	100	94.915	ENSCAFG00000018795	PARN	100	92.801	Canis_familiaris
ENSMMUG00000018849	PARN	100	96.610	ENSCAFG00020024126	PARN	100	92.801	Canis_lupus_dingo
ENSMMUG00000018849	PARN	100	98.305	ENSCHIG00000018143	PARN	100	93.897	Capra_hircus
ENSMMUG00000018849	PARN	60	77.500	ENSCAPG00000007984	PARN	78	63.825	Cavia_aperea
ENSMMUG00000018849	PARN	100	98.305	ENSCPOG00000002263	PARN	100	90.923	Cavia_porcellus
ENSMMUG00000018849	PARN	100	100.000	ENSCCAG00000030367	PARN	100	100.000	Cebus_capucinus
ENSMMUG00000018849	PARN	90	100.000	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSMMUG00000018849	PARN	52	35.862	ENSCATG00000033196	PNLDC1	70	35.862	Cercocebus_atys
ENSMMUG00000018849	PARN	100	96.610	ENSCLAG00000015406	PARN	99	90.610	Chinchilla_lanigera
ENSMMUG00000018849	PARN	100	100.000	ENSCSAG00000008142	PARN	100	99.687	Chlorocebus_sabaeus
ENSMMUG00000018849	PARN	98	98.077	ENSCHOG00000007014	PARN	100	76.899	Choloepus_hoffmanni
ENSMMUG00000018849	PARN	89	85.283	ENSCPBG00000006609	PARN	97	86.034	Chrysemys_picta_bellii
ENSMMUG00000018849	PARN	80	44.465	ENSCING00000010142	-	99	44.465	Ciona_intestinalis
ENSMMUG00000018849	PARN	100	100.000	ENSCANG00000028849	-	100	100.000	Colobus_angolensis_palliatus
ENSMMUG00000018849	PARN	100	96.610	ENSCGRG00001012096	Parn	100	85.670	Cricetulus_griseus_chok1gshd
ENSMMUG00000018849	PARN	100	96.610	ENSCGRG00000004939	Parn	100	85.670	Cricetulus_griseus_crigri
ENSMMUG00000018849	PARN	94	79.661	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSMMUG00000018849	PARN	87	77.966	ENSCVAG00000014848	parn	83	73.630	Cyprinodon_variegatus
ENSMMUG00000018849	PARN	100	71.186	ENSDARG00000102634	parn	100	59.259	Danio_rerio
ENSMMUG00000018849	PARN	100	98.305	ENSDNOG00000000833	PARN	100	93.584	Dasypus_novemcinctus
ENSMMUG00000018849	PARN	74	94.677	ENSETEG00000014828	-	78	94.677	Echinops_telfairi
ENSMMUG00000018849	PARN	76	52.381	ENSEBUG00000007052	PARN	70	70.982	Eptatretus_burgeri
ENSMMUG00000018849	PARN	56	30.086	ENSEBUG00000008118	PNLDC1	61	30.086	Eptatretus_burgeri
ENSMMUG00000018849	PARN	100	98.305	ENSEASG00005011400	PARN	100	93.114	Equus_asinus_asinus
ENSMMUG00000018849	PARN	100	96.610	ENSECAG00000017792	PARN	100	92.958	Equus_caballus
ENSMMUG00000018849	PARN	84	96.610	ENSEEUG00000010370	PARN	86	84.615	Erinaceus_europaeus
ENSMMUG00000018849	PARN	88	79.661	ENSELUG00000013139	parn	77	72.466	Esox_lucius
ENSMMUG00000018849	PARN	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSMMUG00000018849	PARN	98	88.462	ENSFALG00000003911	PARN	98	83.861	Ficedula_albicollis
ENSMMUG00000018849	PARN	100	98.305	ENSFDAG00000009234	PARN	100	90.297	Fukomys_damarensis
ENSMMUG00000018849	PARN	87	79.245	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSMMUG00000018849	PARN	83	76.866	ENSGMOG00000003231	parn	97	76.866	Gadus_morhua
ENSMMUG00000018849	PARN	100	91.525	ENSGALG00000003091	PARN	100	82.737	Gallus_gallus
ENSMMUG00000018849	PARN	86	79.661	ENSGAFG00000011061	parn	84	72.987	Gambusia_affinis
ENSMMUG00000018849	PARN	83	77.612	ENSGACG00000019501	parn	100	68.875	Gasterosteus_aculeatus
ENSMMUG00000018849	PARN	70	79.755	ENSGAGG00000023281	PARN	83	79.755	Gopherus_agassizii
ENSMMUG00000018849	PARN	96	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSMMUG00000018849	PARN	89	77.966	ENSHBUG00000017906	parn	90	77.654	Haplochromis_burtoni
ENSMMUG00000018849	PARN	100	98.305	ENSHGLG00000010886	PARN	100	90.610	Heterocephalus_glaber_female
ENSMMUG00000018849	PARN	100	98.305	ENSHGLG00100014659	PARN	100	90.610	Heterocephalus_glaber_male
ENSMMUG00000018849	PARN	82	74.102	ENSHCOG00000008683	parn	91	74.102	Hippocampus_comes
ENSMMUG00000018849	PARN	86	69.492	ENSIPUG00000012401	parn	84	63.167	Ictalurus_punctatus
ENSMMUG00000018849	PARN	100	96.610	ENSSTOG00000007519	PARN	100	91.549	Ictidomys_tridecemlineatus
ENSMMUG00000018849	PARN	100	98.305	ENSJJAG00000023049	Parn	100	88.106	Jaculus_jaculus
ENSMMUG00000018849	PARN	94	76.271	ENSKMAG00000009462	parn	84	73.891	Kryptolebias_marmoratus
ENSMMUG00000018849	PARN	88	77.966	ENSLBEG00000009167	parn	90	72.835	Labrus_bergylta
ENSMMUG00000018849	PARN	79	78.770	ENSLACG00000004207	PARN	100	77.594	Latimeria_chalumnae
ENSMMUG00000018849	PARN	96	81.356	ENSLOCG00000000715	parn	87	73.597	Lepisosteus_oculatus
ENSMMUG00000018849	PARN	100	98.305	ENSLAFG00000015036	PARN	100	93.114	Loxodonta_africana
ENSMMUG00000018849	PARN	100	100.000	ENSMFAG00000044852	PARN	100	100.000	Macaca_fascicularis
ENSMMUG00000018849	PARN	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSMMUG00000018849	PARN	100	100.000	ENSMLEG00000031743	PARN	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000018849	PARN	89	77.966	ENSMAMG00000006939	parn	84	72.697	Mastacembelus_armatus
ENSMMUG00000018849	PARN	89	77.966	ENSMZEG00005013590	parn	90	77.425	Maylandia_zebra
ENSMMUG00000018849	PARN	94	100.000	ENSMGAG00000001004	PARN	95	82.871	Meleagris_gallopavo
ENSMMUG00000018849	PARN	95	94.286	ENSMAUG00000008025	Parn	100	80.401	Mesocricetus_auratus
ENSMMUG00000018849	PARN	100	98.305	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSMMUG00000018849	PARN	77	91.093	ENSMOCG00000022211	Parn	100	91.093	Microtus_ochrogaster
ENSMMUG00000018849	PARN	83	76.822	ENSMMOG00000011333	parn	87	76.822	Mola_mola
ENSMMUG00000018849	PARN	77	94.355	ENSMODG00000004915	PARN	99	94.355	Monodelphis_domestica
ENSMMUG00000018849	PARN	80	86.207	ENSMALG00000019426	parn	91	78.957	Monopterus_albus
ENSMMUG00000018849	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	86.385	Mus_caroli
ENSMMUG00000018849	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSMMUG00000018849	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	86.072	Mus_pahari
ENSMMUG00000018849	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	86.385	Mus_spretus
ENSMMUG00000018849	PARN	100	98.305	ENSMPUG00000014464	PARN	100	93.114	Mustela_putorius_furo
ENSMMUG00000018849	PARN	77	94.332	ENSMLUG00000005414	PARN	100	94.332	Myotis_lucifugus
ENSMMUG00000018849	PARN	77	83.389	ENSNBRG00000006805	parn	90	77.154	Neolamprologus_brichardi
ENSMMUG00000018849	PARN	100	100.000	ENSNLEG00000010241	PARN	100	100.000	Nomascus_leucogenys
ENSMMUG00000018849	PARN	93	92.308	ENSMEUG00000008178	-	100	60.918	Notamacropus_eugenii
ENSMMUG00000018849	PARN	98	98.077	ENSOPRG00000012187	PARN	100	86.392	Ochotona_princeps
ENSMMUG00000018849	PARN	100	98.305	ENSODEG00000001617	PARN	100	81.776	Octodon_degus
ENSMMUG00000018849	PARN	100	77.966	ENSONIG00000000151	parn	100	69.846	Oreochromis_niloticus
ENSMMUG00000018849	PARN	82	81.627	ENSOANG00000020155	-	97	82.152	Ornithorhynchus_anatinus
ENSMMUG00000018849	PARN	99	91.509	ENSOCUG00000000322	PARN	100	91.509	Oryctolagus_cuniculus
ENSMMUG00000018849	PARN	93	79.661	ENSORLG00020010313	parn	88	71.148	Oryzias_latipes_hni
ENSMMUG00000018849	PARN	93	79.661	ENSORLG00015000300	parn	88	70.984	Oryzias_latipes_hsok
ENSMMUG00000018849	PARN	88	79.661	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSMMUG00000018849	PARN	77	94.545	ENSOGAG00000014626	PARN	100	94.545	Otolemur_garnettii
ENSMMUG00000018849	PARN	77	97.773	ENSOARG00000007574	PARN	100	97.773	Ovis_aries
ENSMMUG00000018849	PARN	100	100.000	ENSPPAG00000031438	PARN	100	100.000	Pan_paniscus
ENSMMUG00000018849	PARN	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSMMUG00000018849	PARN	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSMMUG00000018849	PARN	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSMMUG00000018849	PARN	100	100.000	ENSPANG00000020099	PARN	100	100.000	Papio_anubis
ENSMMUG00000018849	PARN	96	79.661	ENSPKIG00000022807	parn	95	67.857	Paramormyrops_kingsleyae
ENSMMUG00000018849	PARN	98	89.831	ENSPSIG00000014804	PARN	100	83.564	Pelodiscus_sinensis
ENSMMUG00000018849	PARN	80	77.043	ENSPMGG00000014431	parn	75	75.046	Periophthalmus_magnuspinnatus
ENSMMUG00000018849	PARN	100	94.915	ENSPEMG00000018439	Parn	100	83.412	Peromyscus_maniculatus_bairdii
ENSMMUG00000018849	PARN	81	67.500	ENSPMAG00000003956	parn	99	67.500	Petromyzon_marinus
ENSMMUG00000018849	PARN	66	86.998	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSMMUG00000018849	PARN	83	77.612	ENSPFOG00000012823	parn	84	72.559	Poecilia_formosa
ENSMMUG00000018849	PARN	83	77.799	ENSPLAG00000006395	parn	84	72.727	Poecilia_latipinna
ENSMMUG00000018849	PARN	83	77.799	ENSPMEG00000007711	parn	84	72.896	Poecilia_mexicana
ENSMMUG00000018849	PARN	83	77.425	ENSPREG00000000147	parn	84	72.559	Poecilia_reticulata
ENSMMUG00000018849	PARN	100	98.596	ENSPPYG00000007123	PARN	100	98.596	Pongo_abelii
ENSMMUG00000018849	PARN	93	96.154	ENSPCAG00000001741	PARN	100	83.003	Procavia_capensis
ENSMMUG00000018849	PARN	100	98.305	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSMMUG00000018849	PARN	98	98.077	ENSPVAG00000002547	PARN	100	89.715	Pteropus_vampyrus
ENSMMUG00000018849	PARN	89	77.966	ENSPNYG00000006835	parn	90	74.674	Pundamilia_nyererei
ENSMMUG00000018849	PARN	84	73.557	ENSPNAG00000018905	parn	86	73.557	Pygocentrus_nattereri
ENSMMUG00000018849	PARN	100	93.220	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSMMUG00000018849	PARN	72	99.399	ENSRBIG00000018726	PARN	100	99.399	Rhinopithecus_bieti
ENSMMUG00000018849	PARN	72	99.399	ENSRROG00000011162	-	100	99.399	Rhinopithecus_roxellana
ENSMMUG00000018849	PARN	100	100.000	ENSSBOG00000034726	PARN	100	100.000	Saimiri_boliviensis_boliviensis
ENSMMUG00000018849	PARN	65	93.301	ENSSHAG00000008493	PARN	94	93.301	Sarcophilus_harrisii
ENSMMUG00000018849	PARN	94	79.661	ENSSFOG00015014165	parn	94	73.208	Scleropages_formosus
ENSMMUG00000018849	PARN	95	69.839	ENSSMAG00000000685	parn	87	71.956	Scophthalmus_maximus
ENSMMUG00000018849	PARN	94	76.271	ENSSDUG00000014555	parn	83	73.720	Seriola_dumerili
ENSMMUG00000018849	PARN	91	80.690	ENSSARG00000014339	PARN	100	80.690	Sorex_araneus
ENSMMUG00000018849	PARN	100	89.831	ENSSPUG00000007719	PARN	100	85.133	Sphenodon_punctatus
ENSMMUG00000018849	PARN	88	77.966	ENSSPAG00000007095	parn	86	74.906	Stegastes_partitus
ENSMMUG00000018849	PARN	100	98.305	ENSSSCG00000007878	PARN	89	92.488	Sus_scrofa
ENSMMUG00000018849	PARN	55	30.641	ENSTGUG00000011418	PNLDC1	68	30.641	Taeniopygia_guttata
ENSMMUG00000018849	PARN	99	87.037	ENSTGUG00000004971	PARN	99	83.596	Taeniopygia_guttata
ENSMMUG00000018849	PARN	100	79.661	ENSTNIG00000008252	parn	100	69.397	Tetraodon_nigroviridis
ENSMMUG00000018849	PARN	91	79.655	ENSTBEG00000010407	PARN	100	79.655	Tupaia_belangeri
ENSMMUG00000018849	PARN	98	98.077	ENSTTRG00000002843	PARN	100	88.924	Tursiops_truncatus
ENSMMUG00000018849	PARN	68	84.174	ENSUAMG00000008283	PARN	90	84.174	Ursus_americanus
ENSMMUG00000018849	PARN	100	98.305	ENSUMAG00000004527	PARN	100	93.114	Ursus_maritimus
ENSMMUG00000018849	PARN	95	98.077	ENSVPAG00000008968	PARN	100	90.065	Vicugna_pacos
ENSMMUG00000018849	PARN	100	96.610	ENSVVUG00000019509	PARN	100	93.271	Vulpes_vulpes
ENSMMUG00000018849	PARN	100	81.967	ENSXETG00000010994	parn	100	83.080	Xenopus_tropicalis
ENSMMUG00000018849	PARN	86	79.661	ENSXCOG00000015990	parn	96	69.205	Xiphophorus_couchianus
ENSMMUG00000018849	PARN	88	79.661	ENSXMAG00000014783	parn	84	73.232	Xiphophorus_maculatus