EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000018954 (Gene tree)
Gene ID: 709852
Gene Symbol: RBM42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 12878 bases
Position: chr19:31550162-31563039
Accession: 709852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000024943	RRM_1	PF00076.22	9.6e-18	1	1
ENSMMUP00000031663	RRM_1	PF00076.22	9.8e-18	1	1
ENSMMUP00000024945	RRM_1	PF00076.22	9.9e-18	1	1
ENSMMUP00000050313	RRM_1	PF00076.22	1.1e-17	1	1
ENSMMUP00000045206	RRM_1	PF00076.22	9.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000038567	-	1380	-	ENSMMUP00000031663	459 (aa)	-	F6XF83
ENSMMUT00000038566	-	1185	-	ENSMMUP00000031662	394 (aa)	-	F6X6M7
ENSMMUT00000026651	-	1344	-	ENSMMUP00000024943	447 (aa)	-	F6YD35
ENSMMUT00000026653	-	1377	XM_001096319	ENSMMUP00000024945	458 (aa)	XP_001096319	F6YCY8
ENSMMUT00000066954	-	555	-	ENSMMUP00000045206	184 (aa)	-	A0A1D5QAY8
ENSMMUT00000073466	-	5538	XM_015123567	ENSMMUP00000050313	480 (aa)	XP_014979053	A0A1D5QQI5

Gene Model

Click here to download ENSMMUG00000018954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000018954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000018954	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSMMUG00000018954	RBM42	100	97.510	ENSAMEG00000000524	RBM42	100	97.510	Ailuropoda_melanoleuca
ENSMMUG00000018954	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSMMUG00000018954	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.253	Bos_taurus
ENSMMUG00000018954	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSMMUG00000018954	RBM42	100	100.000	ENSCAFG00020018628	RBM42	100	100.000	Canis_lupus_dingo
ENSMMUG00000018954	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	97.991	Capra_hircus
ENSMMUG00000018954	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSMMUG00000018954	RBM42	80	98.187	ENSCAPG00000009566	RBM42	99	98.187	Cavia_aperea
ENSMMUG00000018954	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	97.550	Cavia_porcellus
ENSMMUG00000018954	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSMMUG00000018954	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSMMUG00000018954	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.105	Chinchilla_lanigera
ENSMMUG00000018954	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	98.472	Chlorocebus_sabaeus
ENSMMUG00000018954	RBM42	100	88.750	ENSCANG00000030272	RBM42	100	88.750	Colobus_angolensis_palliatus
ENSMMUG00000018954	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	96.458	Cricetulus_griseus_chok1gshd
ENSMMUG00000018954	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	96.687	Dasypus_novemcinctus
ENSMMUG00000018954	RBM42	97	100.000	ENSDORG00000013001	Rbm42	99	96.637	Dipodomys_ordii
ENSMMUG00000018954	RBM42	91	92.754	ENSETEG00000007878	RBM42	74	92.754	Echinops_telfairi
ENSMMUG00000018954	RBM42	99	97.978	ENSEASG00005001074	RBM42	100	97.978	Equus_asinus_asinus
ENSMMUG00000018954	RBM42	99	97.978	ENSECAG00000018215	RBM42	100	97.978	Equus_caballus
ENSMMUG00000018954	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSMMUG00000018954	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.652	Fukomys_damarensis
ENSMMUG00000018954	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSMMUG00000018954	RBM42	99	96.188	ENSHGLG00000008418	RBM42	99	96.188	Heterocephalus_glaber_female
ENSMMUG00000018954	RBM42	99	96.188	ENSHGLG00100018667	RBM42	99	96.188	Heterocephalus_glaber_male
ENSMMUG00000018954	RBM42	100	100.000	ENSSTOG00000013050	RBM42	100	96.667	Ictidomys_tridecemlineatus
ENSMMUG00000018954	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.847	Jaculus_jaculus
ENSMMUG00000018954	RBM42	98	94.692	ENSLAFG00000014993	RBM42	99	91.458	Loxodonta_africana
ENSMMUG00000018954	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSMMUG00000018954	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSMMUG00000018954	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000018954	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSMMUG00000018954	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	96.250	Microtus_ochrogaster
ENSMMUG00000018954	RBM42	84	100.000	ENSMODG00000013957	RBM42	83	80.943	Monodelphis_domestica
ENSMMUG00000018954	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	100	96.659	Mus_caroli
ENSMMUG00000018954	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	100	96.659	Mus_musculus
ENSMMUG00000018954	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	100	96.659	Mus_pahari
ENSMMUG00000018954	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	100	96.659	Mus_spretus
ENSMMUG00000018954	RBM42	99	97.545	ENSMPUG00000006288	RBM42	100	97.545	Mustela_putorius_furo
ENSMMUG00000018954	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	96.458	Myotis_lucifugus
ENSMMUG00000018954	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	96.413	Nannospalax_galili
ENSMMUG00000018954	RBM42	73	99.703	ENSNLEG00000011272	-	88	99.703	Nomascus_leucogenys
ENSMMUG00000018954	RBM42	96	81.720	ENSMEUG00000016300	RBM42	100	81.429	Notamacropus_eugenii
ENSMMUG00000018954	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	91.667	Ochotona_princeps
ENSMMUG00000018954	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.098	Octodon_degus
ENSMMUG00000018954	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	96.725	Oryctolagus_cuniculus
ENSMMUG00000018954	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.083	Otolemur_garnettii
ENSMMUG00000018954	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	92.693	Ovis_aries
ENSMMUG00000018954	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSMMUG00000018954	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSMMUG00000018954	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSMMUG00000018954	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSMMUG00000018954	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSMMUG00000018954	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.315	Peromyscus_maniculatus_bairdii
ENSMMUG00000018954	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	83.814	Phascolarctos_cinereus
ENSMMUG00000018954	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	98.763	Pongo_abelii
ENSMMUG00000018954	RBM42	90	100.000	ENSPCAG00000013053	RBM42	100	82.292	Procavia_capensis
ENSMMUG00000018954	RBM42	73	97.024	ENSPCOG00000020672	RBM42	81	98.799	Propithecus_coquereli
ENSMMUG00000018954	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSMMUG00000018954	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	97.500	Pteropus_vampyrus
ENSMMUG00000018954	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	100	96.882	Rattus_norvegicus
ENSMMUG00000018954	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSMMUG00000018954	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSMMUG00000018954	RBM42	85	99.507	ENSSBOG00000030666	RBM42	100	99.507	Saimiri_boliviensis_boliviensis
ENSMMUG00000018954	RBM42	100	87.500	ENSSARG00000010724	RBM42	100	87.500	Sorex_araneus
ENSMMUG00000018954	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.083	Sus_scrofa
ENSMMUG00000018954	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	97.708	Ursus_americanus
ENSMMUG00000018954	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	97.708	Ursus_maritimus
ENSMMUG00000018954	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	97.321	Vulpes_vulpes