EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000019105 (Gene tree)
Gene ID: 711623
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 25356 bases
Position: chr1:101134222-101159577
Accession: 711623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000039629	RTC	PF01137.21	6.5e-87	1	1
ENSMMUP00000025123	RTC	PF01137.21	3.6e-81	1	1
ENSMMUP00000039629	RTC_insert	PF05189.13	2.1e-24	1	1
ENSMMUP00000025123	RTC_insert	PF05189.13	2.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000046593	RTCA-201	1587	XM_001107617	ENSMMUP00000039629	366 (aa)	XP_001107617	F7HIB0
ENSMMUT00000026849	RTCA-202	1140	-	ENSMMUP00000025123	379 (aa)	-	F6T8X7

Gene Model

Click here to download ENSMMUG00000019105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000019105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000019105	RTCA	100	98.417	ENSG00000137996	RTCA	100	100.000	Homo_sapiens
ENSMMUG00000019105	RTCA	99	71.745	ENSAPOG00000001345	rtca	98	71.745	Acanthochromis_polyacanthus
ENSMMUG00000019105	RTCA	73	94.052	ENSAMEG00000008855	RTCA	100	94.052	Ailuropoda_melanoleuca
ENSMMUG00000019105	RTCA	99	72.022	ENSACIG00000019643	rtca	99	72.022	Amphilophus_citrinellus
ENSMMUG00000019105	RTCA	100	71.038	ENSAOCG00000014979	rtca	99	71.038	Amphiprion_ocellaris
ENSMMUG00000019105	RTCA	100	71.038	ENSAPEG00000006945	rtca	99	71.038	Amphiprion_percula
ENSMMUG00000019105	RTCA	96	71.795	ENSATEG00000006315	rtca	96	71.795	Anabas_testudineus
ENSMMUG00000019105	RTCA	96	80.508	ENSAPLG00000015430	RTCA	100	80.508	Anas_platyrhynchos
ENSMMUG00000019105	RTCA	100	96.995	ENSANAG00000025446	RTCA	100	96.995	Aotus_nancymaae
ENSMMUG00000019105	RTCA	100	70.219	ENSACLG00000020770	rtca	99	70.219	Astatotilapia_calliptera
ENSMMUG00000019105	RTCA	100	72.951	ENSAMXG00000043271	rtca	100	72.951	Astyanax_mexicanus
ENSMMUG00000019105	RTCA	100	95.355	ENSBTAG00000006321	RTCA	100	95.355	Bos_taurus
ENSMMUG00000019105	RTCA	100	97.541	ENSCJAG00000003398	RTCA	100	97.541	Callithrix_jacchus
ENSMMUG00000019105	RTCA	100	94.809	ENSCAFG00000020010	RTCA	68	94.809	Canis_familiaris
ENSMMUG00000019105	RTCA	100	94.809	ENSCAFG00020011528	RTCA	57	94.809	Canis_lupus_dingo
ENSMMUG00000019105	RTCA	100	95.082	ENSCHIG00000018937	RTCA	100	95.082	Capra_hircus
ENSMMUG00000019105	RTCA	100	92.623	ENSTSYG00000011305	RTCA	100	92.623	Carlito_syrichta
ENSMMUG00000019105	RTCA	100	97.268	ENSCCAG00000021844	RTCA	100	97.268	Cebus_capucinus
ENSMMUG00000019105	RTCA	100	99.208	ENSCATG00000019364	RTCA	100	99.208	Cercocebus_atys
ENSMMUG00000019105	RTCA	87	95.584	ENSCLAG00000006125	RTCA	100	95.584	Chinchilla_lanigera
ENSMMUG00000019105	RTCA	100	99.454	ENSCSAG00000001509	RTCA	100	99.454	Chlorocebus_sabaeus
ENSMMUG00000019105	RTCA	100	93.169	ENSCHOG00000005211	RTCA	100	93.169	Choloepus_hoffmanni
ENSMMUG00000019105	RTCA	100	82.787	ENSCPBG00000026658	RTCA	100	82.787	Chrysemys_picta_bellii
ENSMMUG00000019105	RTCA	98	55.956	ENSCING00000007875	-	98	55.956	Ciona_intestinalis
ENSMMUG00000019105	RTCA	98	54.167	ENSCSAVG00000007269	-	98	54.167	Ciona_savignyi
ENSMMUG00000019105	RTCA	100	99.208	ENSCANG00000040106	RTCA	100	99.208	Colobus_angolensis_palliatus
ENSMMUG00000019105	RTCA	73	90.706	ENSCGRG00001013163	Rtca	85	90.706	Cricetulus_griseus_chok1gshd
ENSMMUG00000019105	RTCA	99	68.767	ENSCSEG00000000530	rtca	98	68.767	Cynoglossus_semilaevis
ENSMMUG00000019105	RTCA	100	59.290	ENSCVAG00000021809	rtca	100	59.290	Cyprinodon_variegatus
ENSMMUG00000019105	RTCA	100	73.770	ENSDARG00000002215	rtca	100	73.770	Danio_rerio
ENSMMUG00000019105	RTCA	100	93.716	ENSDNOG00000000456	RTCA	100	93.716	Dasypus_novemcinctus
ENSMMUG00000019105	RTCA	100	92.623	ENSDORG00000005448	Rtca	100	92.623	Dipodomys_ordii
ENSMMUG00000019105	RTCA	98	38.547	FBgn0025630	Rtca	98	38.547	Drosophila_melanogaster
ENSMMUG00000019105	RTCA	95	53.955	ENSEBUG00000008556	rtca	97	53.955	Eptatretus_burgeri
ENSMMUG00000019105	RTCA	100	94.262	ENSEASG00005015926	RTCA	100	94.262	Equus_asinus_asinus
ENSMMUG00000019105	RTCA	100	94.262	ENSECAG00000019831	RTCA	100	94.262	Equus_caballus
ENSMMUG00000019105	RTCA	91	83.237	ENSEEUG00000001165	RTCA	100	83.237	Erinaceus_europaeus
ENSMMUG00000019105	RTCA	99	72.299	ENSELUG00000003741	rtca	99	72.299	Esox_lucius
ENSMMUG00000019105	RTCA	100	94.809	ENSFCAG00000024460	RTCA	100	94.809	Felis_catus
ENSMMUG00000019105	RTCA	91	84.084	ENSFALG00000002443	RTCA	90	84.084	Ficedula_albicollis
ENSMMUG00000019105	RTCA	100	95.355	ENSFDAG00000012070	-	100	95.355	Fukomys_damarensis
ENSMMUG00000019105	RTCA	98	75.414	ENSFDAG00000016084	-	100	75.414	Fukomys_damarensis
ENSMMUG00000019105	RTCA	68	62.500	ENSFHEG00000002868	rtca	96	68.142	Fundulus_heteroclitus
ENSMMUG00000019105	RTCA	100	68.852	ENSGMOG00000013264	rtca	100	68.852	Gadus_morhua
ENSMMUG00000019105	RTCA	100	82.787	ENSGALG00000005277	RTCA	100	82.787	Gallus_gallus
ENSMMUG00000019105	RTCA	100	71.585	ENSGAFG00000011853	rtca	99	71.585	Gambusia_affinis
ENSMMUG00000019105	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSMMUG00000019105	RTCA	80	83.618	ENSGAGG00000023306	RTCA	100	83.618	Gopherus_agassizii
ENSMMUG00000019105	RTCA	100	97.541	ENSGGOG00000044018	-	100	97.541	Gorilla_gorilla
ENSMMUG00000019105	RTCA	100	98.417	ENSGGOG00000009546	-	100	98.417	Gorilla_gorilla
ENSMMUG00000019105	RTCA	100	69.945	ENSHBUG00000002114	rtca	99	69.945	Haplochromis_burtoni
ENSMMUG00000019105	RTCA	100	95.082	ENSHGLG00000002617	RTCA	100	95.082	Heterocephalus_glaber_female
ENSMMUG00000019105	RTCA	100	95.082	ENSHGLG00100006056	RTCA	100	95.082	Heterocephalus_glaber_male
ENSMMUG00000019105	RTCA	100	64.208	ENSHCOG00000020628	rtca	89	64.208	Hippocampus_comes
ENSMMUG00000019105	RTCA	100	73.224	ENSIPUG00000024803	rtca	100	73.224	Ictalurus_punctatus
ENSMMUG00000019105	RTCA	100	87.978	ENSSTOG00000013528	-	100	87.978	Ictidomys_tridecemlineatus
ENSMMUG00000019105	RTCA	100	83.379	ENSSTOG00000033099	-	100	83.379	Ictidomys_tridecemlineatus
ENSMMUG00000019105	RTCA	100	66.393	ENSJJAG00000016178	Rtca	100	66.393	Jaculus_jaculus
ENSMMUG00000019105	RTCA	99	72.022	ENSKMAG00000006651	rtca	98	72.022	Kryptolebias_marmoratus
ENSMMUG00000019105	RTCA	88	68.536	ENSLBEG00000002448	-	99	68.536	Labrus_bergylta
ENSMMUG00000019105	RTCA	99	69.252	ENSLBEG00000028971	rtca	99	69.252	Labrus_bergylta
ENSMMUG00000019105	RTCA	100	77.596	ENSLACG00000013666	RTCA	100	77.596	Latimeria_chalumnae
ENSMMUG00000019105	RTCA	100	72.951	ENSLOCG00000000093	rtca	99	72.951	Lepisosteus_oculatus
ENSMMUG00000019105	RTCA	100	92.896	ENSLAFG00000001473	RTCA	100	92.896	Loxodonta_africana
ENSMMUG00000019105	RTCA	100	99.472	ENSMFAG00000034132	RTCA	100	99.472	Macaca_fascicularis
ENSMMUG00000019105	RTCA	84	99.353	ENSMNEG00000037163	RTCA	100	99.353	Macaca_nemestrina
ENSMMUG00000019105	RTCA	100	81.794	ENSMLEG00000042151	RTCA	100	81.794	Mandrillus_leucophaeus
ENSMMUG00000019105	RTCA	100	73.224	ENSMAMG00000016536	rtca	100	73.224	Mastacembelus_armatus
ENSMMUG00000019105	RTCA	100	70.219	ENSMZEG00005017945	rtca	99	70.219	Maylandia_zebra
ENSMMUG00000019105	RTCA	87	81.818	ENSMGAG00000006892	RTCA	100	81.250	Meleagris_gallopavo
ENSMMUG00000019105	RTCA	100	91.530	ENSMAUG00000008488	Rtca	100	91.530	Mesocricetus_auratus
ENSMMUG00000019105	RTCA	84	95.793	ENSMICG00000008643	RTCA	100	95.793	Microcebus_murinus
ENSMMUG00000019105	RTCA	100	91.803	ENSMOCG00000016660	Rtca	100	91.803	Microtus_ochrogaster
ENSMMUG00000019105	RTCA	84	71.197	ENSMMOG00000007750	rtca	100	71.197	Mola_mola
ENSMMUG00000019105	RTCA	100	89.891	ENSMODG00000003557	RTCA	100	89.891	Monodelphis_domestica
ENSMMUG00000019105	RTCA	100	72.951	ENSMALG00000020844	rtca	100	72.951	Monopterus_albus
ENSMMUG00000019105	RTCA	100	90.984	MGP_CAROLIEiJ_G0025565	Rtca	100	90.984	Mus_caroli
ENSMMUG00000019105	RTCA	100	90.437	ENSMUSG00000000339	Rtca	100	90.437	Mus_musculus
ENSMMUG00000019105	RTCA	100	91.257	MGP_PahariEiJ_G0027011	Rtca	100	91.257	Mus_pahari
ENSMMUG00000019105	RTCA	100	90.710	MGP_SPRETEiJ_G0026515	Rtca	100	90.710	Mus_spretus
ENSMMUG00000019105	RTCA	100	95.082	ENSMPUG00000012119	RTCA	100	95.082	Mustela_putorius_furo
ENSMMUG00000019105	RTCA	100	87.193	ENSMLUG00000009922	RTCA	100	87.193	Myotis_lucifugus
ENSMMUG00000019105	RTCA	100	91.530	ENSNGAG00000011540	Rtca	99	91.530	Nannospalax_galili
ENSMMUG00000019105	RTCA	100	70.219	ENSNBRG00000003062	rtca	99	70.219	Neolamprologus_brichardi
ENSMMUG00000019105	RTCA	100	98.417	ENSNLEG00000031426	RTCA	100	98.417	Nomascus_leucogenys
ENSMMUG00000019105	RTCA	59	95.122	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSMMUG00000019105	RTCA	73	87.732	ENSOPRG00000012092	RTCA	71	87.732	Ochotona_princeps
ENSMMUG00000019105	RTCA	95	94.540	ENSODEG00000006990	RTCA	96	94.587	Octodon_degus
ENSMMUG00000019105	RTCA	100	70.219	ENSONIG00000007753	rtca	99	70.219	Oreochromis_niloticus
ENSMMUG00000019105	RTCA	87	87.382	ENSOANG00000012055	RTCA	98	87.382	Ornithorhynchus_anatinus
ENSMMUG00000019105	RTCA	100	95.355	ENSOCUG00000014247	RTCA	100	95.355	Oryctolagus_cuniculus
ENSMMUG00000019105	RTCA	100	70.492	ENSORLG00000013605	rtca	100	70.492	Oryzias_latipes
ENSMMUG00000019105	RTCA	100	70.492	ENSORLG00020001904	rtca	100	70.492	Oryzias_latipes_hni
ENSMMUG00000019105	RTCA	100	70.492	ENSORLG00015021064	rtca	100	70.492	Oryzias_latipes_hsok
ENSMMUG00000019105	RTCA	100	71.311	ENSOMEG00000000756	rtca	100	71.311	Oryzias_melastigma
ENSMMUG00000019105	RTCA	100	85.246	ENSOGAG00000005627	RTCA	100	85.246	Otolemur_garnettii
ENSMMUG00000019105	RTCA	87	94.025	ENSOARG00000018122	RTCA	100	94.025	Ovis_aries
ENSMMUG00000019105	RTCA	100	97.889	ENSPPAG00000035119	RTCA	100	97.889	Pan_paniscus
ENSMMUG00000019105	RTCA	100	94.809	ENSPPRG00000000350	RTCA	100	94.809	Panthera_pardus
ENSMMUG00000019105	RTCA	100	94.536	ENSPTIG00000012816	RTCA	100	94.536	Panthera_tigris_altaica
ENSMMUG00000019105	RTCA	100	97.889	ENSPTRG00000001004	RTCA	100	97.889	Pan_troglodytes
ENSMMUG00000019105	RTCA	100	98.634	ENSPANG00000000346	RTCA	100	98.634	Papio_anubis
ENSMMUG00000019105	RTCA	100	74.317	ENSPKIG00000001653	rtca	100	74.317	Paramormyrops_kingsleyae
ENSMMUG00000019105	RTCA	100	83.333	ENSPSIG00000011408	RTCA	100	83.333	Pelodiscus_sinensis
ENSMMUG00000019105	RTCA	100	90.984	ENSPEMG00000018582	Rtca	100	90.984	Peromyscus_maniculatus_bairdii
ENSMMUG00000019105	RTCA	100	58.311	ENSPMAG00000009110	rtca	100	58.311	Petromyzon_marinus
ENSMMUG00000019105	RTCA	100	90.164	ENSPCIG00000007684	RTCA	100	90.164	Phascolarctos_cinereus
ENSMMUG00000019105	RTCA	100	71.935	ENSPFOG00000004824	rtca	100	71.935	Poecilia_formosa
ENSMMUG00000019105	RTCA	100	72.131	ENSPLAG00000011753	rtca	99	72.131	Poecilia_latipinna
ENSMMUG00000019105	RTCA	100	72.131	ENSPMEG00000020469	rtca	99	72.131	Poecilia_mexicana
ENSMMUG00000019105	RTCA	100	72.951	ENSPREG00000001365	rtca	99	72.951	Poecilia_reticulata
ENSMMUG00000019105	RTCA	100	98.361	ENSPPYG00000001115	RTCA	100	98.361	Pongo_abelii
ENSMMUG00000019105	RTCA	100	90.984	ENSPCAG00000005076	RTCA	100	90.984	Procavia_capensis
ENSMMUG00000019105	RTCA	100	96.448	ENSPCOG00000005603	RTCA	100	96.448	Propithecus_coquereli
ENSMMUG00000019105	RTCA	100	92.876	ENSPVAG00000009478	RTCA	100	92.876	Pteropus_vampyrus
ENSMMUG00000019105	RTCA	100	70.219	ENSPNYG00000004722	rtca	99	70.219	Pundamilia_nyererei
ENSMMUG00000019105	RTCA	100	72.951	ENSPNAG00000022270	rtca	100	72.951	Pygocentrus_nattereri
ENSMMUG00000019105	RTCA	100	90.984	ENSRNOG00000014575	Rtca	100	90.984	Rattus_norvegicus
ENSMMUG00000019105	RTCA	100	98.681	ENSRBIG00000041180	RTCA	100	98.681	Rhinopithecus_bieti
ENSMMUG00000019105	RTCA	100	98.681	ENSRROG00000024929	RTCA	100	98.681	Rhinopithecus_roxellana
ENSMMUG00000019105	RTCA	100	96.721	ENSSBOG00000028626	RTCA	100	96.721	Saimiri_boliviensis_boliviensis
ENSMMUG00000019105	RTCA	100	89.891	ENSSHAG00000001758	RTCA	100	89.891	Sarcophilus_harrisii
ENSMMUG00000019105	RTCA	98	69.167	ENSSMAG00000014680	rtca	97	69.167	Scophthalmus_maximus
ENSMMUG00000019105	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSMMUG00000019105	RTCA	96	71.795	ENSSLDG00000018985	rtca	95	71.795	Seriola_lalandi_dorsalis
ENSMMUG00000019105	RTCA	87	85.489	ENSSARG00000013993	RTCA	100	85.489	Sorex_araneus
ENSMMUG00000019105	RTCA	100	70.492	ENSSPAG00000011938	rtca	99	70.492	Stegastes_partitus
ENSMMUG00000019105	RTCA	100	94.536	ENSSSCG00000006865	RTCA	100	94.536	Sus_scrofa
ENSMMUG00000019105	RTCA	100	83.607	ENSTGUG00000005154	RTCA	100	83.607	Taeniopygia_guttata
ENSMMUG00000019105	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSMMUG00000019105	RTCA	100	71.858	ENSTNIG00000004725	rtca	100	71.858	Tetraodon_nigroviridis
ENSMMUG00000019105	RTCA	60	90.000	ENSTBEG00000000943	RTCA	82	67.227	Tupaia_belangeri
ENSMMUG00000019105	RTCA	100	93.668	ENSTTRG00000015327	RTCA	100	93.668	Tursiops_truncatus
ENSMMUG00000019105	RTCA	94	91.837	ENSUAMG00000017265	RTCA	96	91.837	Ursus_americanus
ENSMMUG00000019105	RTCA	100	93.989	ENSUMAG00000007881	RTCA	100	93.989	Ursus_maritimus
ENSMMUG00000019105	RTCA	87	85.174	ENSVPAG00000001039	RTCA	87	85.152	Vicugna_pacos
ENSMMUG00000019105	RTCA	100	94.536	ENSVVUG00000022041	RTCA	68	94.536	Vulpes_vulpes
ENSMMUG00000019105	RTCA	99	64.578	ENSXETG00000031661	RTCA	99	64.578	Xenopus_tropicalis
ENSMMUG00000019105	RTCA	100	62.568	ENSXCOG00000008002	rtca	100	62.568	Xiphophorus_couchianus
ENSMMUG00000019105	RTCA	100	71.858	ENSXMAG00000005482	rtca	99	71.858	Xiphophorus_maculatus