EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000020262 (Gene tree)
Gene ID: 705080
Gene Symbol: PSPC1
Alias: -
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 77552 bases
Position: chr17:330284-407835
Accession: 705080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000057088	RRM_1	PF00076.22	1.5e-32	1	2
ENSMMUP00000057088	RRM_1	PF00076.22	1.5e-32	2	2
ENSMMUP00000036494	RRM_1	PF00076.22	2.2e-32	1	2
ENSMMUP00000036494	RRM_1	PF00076.22	2.2e-32	2	2
ENSMMUP00000026671	RRM_1	PF00076.22	3.1e-32	1	2
ENSMMUP00000026671	RRM_1	PF00076.22	3.1e-32	2	2
ENSMMUP00000047002	RRM_1	PF00076.22	3.1e-32	1	2
ENSMMUP00000047002	RRM_1	PF00076.22	3.1e-32	2	2
ENSMMUP00000036495	RRM_1	PF00076.22	4.2e-32	1	2
ENSMMUP00000036495	RRM_1	PF00076.22	4.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000074914	-	2772	XM_015120675	ENSMMUP00000047002	474 (aa)	XP_014976161	A0A1D5QG32
ENSMMUT00000043493	-	2062	-	ENSMMUP00000036495	523 (aa)	-	F6XYS7
ENSMMUT00000043492	-	1269	XM_015120677	ENSMMUP00000036494	422 (aa)	XP_014976163	F6XYT7
ENSMMUT00000028504	-	1410	-	ENSMMUP00000026671	469 (aa)	-	F6UJ73
ENSMMUT00000072351	-	1113	-	ENSMMUP00000057088	370 (aa)	-	A0A1D5R9U7

Gene Model

Click here to download ENSMMUG00000020262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000020262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000020262	PSPC1	68	73.913	ENSMMUG00000020481	NONO	85	68.712
ENSMMUG00000020262	PSPC1	85	74.528	ENSMMUG00000019154	SFPQ	51	68.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000020262	PSPC1	100	99.235	ENSG00000121390	PSPC1	100	99.235	Homo_sapiens
ENSMMUG00000020262	PSPC1	88	81.173	ENSAPOG00000015946	pspc1	79	73.488	Acanthochromis_polyacanthus
ENSMMUG00000020262	PSPC1	100	98.470	ENSAMEG00000017420	PSPC1	100	98.470	Ailuropoda_melanoleuca
ENSMMUG00000020262	PSPC1	91	69.940	ENSACIG00000018695	pspc1	87	59.448	Amphilophus_citrinellus
ENSMMUG00000020262	PSPC1	88	80.556	ENSAOCG00000005279	pspc1	78	73.023	Amphiprion_ocellaris
ENSMMUG00000020262	PSPC1	88	80.556	ENSAPEG00000015927	pspc1	79	73.023	Amphiprion_percula
ENSMMUG00000020262	PSPC1	89	67.073	ENSATEG00000004878	pspc1	76	61.687	Anabas_testudineus
ENSMMUG00000020262	PSPC1	77	93.812	ENSAPLG00000006246	PSPC1	100	93.812	Anas_platyrhynchos
ENSMMUG00000020262	PSPC1	85	75.786	ENSAPLG00000003643	SFPQ	69	69.126	Anas_platyrhynchos
ENSMMUG00000020262	PSPC1	78	70.732	ENSACAG00000013307	-	56	64.917	Anolis_carolinensis
ENSMMUG00000020262	PSPC1	88	96.626	ENSACAG00000002093	PSPC1	88	91.631	Anolis_carolinensis
ENSMMUG00000020262	PSPC1	100	98.470	ENSANAG00000000059	PSPC1	100	98.470	Aotus_nancymaae
ENSMMUG00000020262	PSPC1	88	71.865	ENSACLG00000027220	pspc1	87	58.672	Astatotilapia_calliptera
ENSMMUG00000020262	PSPC1	87	79.331	ENSAMXG00000036881	pspc1	80	72.874	Astyanax_mexicanus
ENSMMUG00000020262	PSPC1	100	95.985	ENSBTAG00000003934	PSPC1	100	95.985	Bos_taurus
ENSMMUG00000020262	PSPC1	100	98.470	ENSCJAG00000004554	PSPC1	100	98.470	Callithrix_jacchus
ENSMMUG00000020262	PSPC1	100	98.470	ENSCAFG00020002009	PSPC1	100	98.470	Canis_lupus_dingo
ENSMMUG00000020262	PSPC1	100	95.985	ENSCHIG00000016708	PSPC1	100	95.985	Capra_hircus
ENSMMUG00000020262	PSPC1	80	88.152	ENSTSYG00000032882	PSPC1	93	85.511	Carlito_syrichta
ENSMMUG00000020262	PSPC1	100	96.558	ENSCPOG00000000395	PSPC1	100	96.558	Cavia_porcellus
ENSMMUG00000020262	PSPC1	100	98.470	ENSCCAG00000033498	PSPC1	100	98.470	Cebus_capucinus
ENSMMUG00000020262	PSPC1	100	99.618	ENSCATG00000036434	PSPC1	100	99.618	Cercocebus_atys
ENSMMUG00000020262	PSPC1	89	87.527	ENSCLAG00000005241	PSPC1	100	87.527	Chinchilla_lanigera
ENSMMUG00000020262	PSPC1	95	97.429	ENSCHOG00000008913	PSPC1	100	91.587	Choloepus_hoffmanni
ENSMMUG00000020262	PSPC1	99	86.692	ENSCPBG00000020859	PSPC1	89	94.004	Chrysemys_picta_bellii
ENSMMUG00000020262	PSPC1	83	58.766	ENSCSAVG00000003533	-	53	61.786	Ciona_savignyi
ENSMMUG00000020262	PSPC1	72	99.248	ENSCANG00000018948	PSPC1	89	99.627	Colobus_angolensis_palliatus
ENSMMUG00000020262	PSPC1	100	96.750	ENSCGRG00001018368	Pspc1	100	96.750	Cricetulus_griseus_chok1gshd
ENSMMUG00000020262	PSPC1	100	96.750	ENSCGRG00000011724	Pspc1	100	96.750	Cricetulus_griseus_crigri
ENSMMUG00000020262	PSPC1	86	78.438	ENSCVAG00000007679	-	78	68.246	Cyprinodon_variegatus
ENSMMUG00000020262	PSPC1	94	77.522	ENSDARG00000006621	pspc1	100	67.633	Danio_rerio
ENSMMUG00000020262	PSPC1	100	97.132	ENSDNOG00000011078	PSPC1	100	97.132	Dasypus_novemcinctus
ENSMMUG00000020262	PSPC1	100	94.073	ENSDORG00000016050	Pspc1	100	94.073	Dipodomys_ordii
ENSMMUG00000020262	PSPC1	55	100.000	ENSETEG00000000502	-	72	100.000	Echinops_telfairi
ENSMMUG00000020262	PSPC1	87	73.313	ENSEBUG00000003964	-	62	72.254	Eptatretus_burgeri
ENSMMUG00000020262	PSPC1	84	45.536	ENSEBUG00000010133	pspc1	72	51.273	Eptatretus_burgeri
ENSMMUG00000020262	PSPC1	100	97.897	ENSEASG00005000119	PSPC1	100	97.897	Equus_asinus_asinus
ENSMMUG00000020262	PSPC1	100	97.897	ENSECAG00000017286	PSPC1	100	97.897	Equus_caballus
ENSMMUG00000020262	PSPC1	88	81.988	ENSEEUG00000011288	-	100	64.818	Erinaceus_europaeus
ENSMMUG00000020262	PSPC1	92	80.000	ENSELUG00000003746	pspc1	78	81.957	Esox_lucius
ENSMMUG00000020262	PSPC1	100	98.470	ENSFCAG00000027841	PSPC1	100	98.470	Felis_catus
ENSMMUG00000020262	PSPC1	89	96.364	ENSFALG00000008750	PSPC1	99	88.145	Ficedula_albicollis
ENSMMUG00000020262	PSPC1	100	94.646	ENSFDAG00000002617	PSPC1	100	94.646	Fukomys_damarensis
ENSMMUG00000020262	PSPC1	78	82.759	ENSGMOG00000015074	pspc1	86	65.376	Gadus_morhua
ENSMMUG00000020262	PSPC1	88	97.231	ENSGALG00000017142	PSPC1	89	94.647	Gallus_gallus
ENSMMUG00000020262	PSPC1	94	74.499	ENSGAFG00000006327	pspc1	68	78.049	Gambusia_affinis
ENSMMUG00000020262	PSPC1	88	74.074	ENSGACG00000014901	pspc1	92	73.700	Gasterosteus_aculeatus
ENSMMUG00000020262	PSPC1	89	72.892	ENSGAGG00000017325	-	57	67.385	Gopherus_agassizii
ENSMMUG00000020262	PSPC1	99	86.692	ENSGAGG00000019164	PSPC1	89	94.004	Gopherus_agassizii
ENSMMUG00000020262	PSPC1	100	99.044	ENSGGOG00000003414	PSPC1	100	99.044	Gorilla_gorilla
ENSMMUG00000020262	PSPC1	88	79.321	ENSHBUG00000001139	pspc1	87	69.528	Haplochromis_burtoni
ENSMMUG00000020262	PSPC1	100	96.558	ENSHGLG00000018811	PSPC1	100	96.558	Heterocephalus_glaber_female
ENSMMUG00000020262	PSPC1	82	97.682	ENSHGLG00100007962	PSPC1	100	92.286	Heterocephalus_glaber_male
ENSMMUG00000020262	PSPC1	88	74.154	ENSHCOG00000013251	pspc1	83	71.658	Hippocampus_comes
ENSMMUG00000020262	PSPC1	92	80.814	ENSIPUG00000013192	pspc1	88	73.673	Ictalurus_punctatus
ENSMMUG00000020262	PSPC1	100	97.706	ENSSTOG00000026833	PSPC1	100	97.706	Ictidomys_tridecemlineatus
ENSMMUG00000020262	PSPC1	100	97.323	ENSJJAG00000018334	Pspc1	100	97.323	Jaculus_jaculus
ENSMMUG00000020262	PSPC1	78	69.204	ENSKMAG00000013525	-	84	54.194	Kryptolebias_marmoratus
ENSMMUG00000020262	PSPC1	94	76.369	ENSLBEG00000004474	pspc1	71	77.477	Labrus_bergylta
ENSMMUG00000020262	PSPC1	99	76.111	ENSLACG00000010762	PSPC1	88	85.129	Latimeria_chalumnae
ENSMMUG00000020262	PSPC1	89	86.280	ENSLOCG00000010832	pspc1	91	84.017	Lepisosteus_oculatus
ENSMMUG00000020262	PSPC1	100	96.941	ENSLAFG00000010968	PSPC1	100	96.941	Loxodonta_africana
ENSMMUG00000020262	PSPC1	100	100.000	ENSMFAG00000032728	PSPC1	100	100.000	Macaca_fascicularis
ENSMMUG00000020262	PSPC1	100	100.000	ENSMNEG00000027401	PSPC1	100	100.000	Macaca_nemestrina
ENSMMUG00000020262	PSPC1	100	100.000	ENSMLEG00000039043	PSPC1	99	100.000	Mandrillus_leucophaeus
ENSMMUG00000020262	PSPC1	88	78.086	ENSMAMG00000004333	pspc1	77	71.395	Mastacembelus_armatus
ENSMMUG00000020262	PSPC1	88	71.865	ENSMZEG00005005726	pspc1	87	58.672	Maylandia_zebra
ENSMMUG00000020262	PSPC1	77	93.596	ENSMGAG00000015134	PSPC1	100	93.596	Meleagris_gallopavo
ENSMMUG00000020262	PSPC1	99	90.733	ENSMAUG00000021067	Pspc1	100	90.558	Mesocricetus_auratus
ENSMMUG00000020262	PSPC1	100	98.088	ENSMICG00000013970	PSPC1	100	98.291	Microcebus_murinus
ENSMMUG00000020262	PSPC1	100	97.514	ENSMOCG00000006060	Pspc1	100	97.514	Microtus_ochrogaster
ENSMMUG00000020262	PSPC1	93	54.624	ENSMMOG00000004352	pspc1	60	52.083	Mola_mola
ENSMMUG00000020262	PSPC1	99	96.753	ENSMODG00000008029	PSPC1	78	96.289	Monodelphis_domestica
ENSMMUG00000020262	PSPC1	92	73.563	ENSMALG00000008914	pspc1	88	67.377	Monopterus_albus
ENSMMUG00000020262	PSPC1	100	97.328	MGP_CAROLIEiJ_G0019341	Pspc1	100	97.328	Mus_caroli
ENSMMUG00000020262	PSPC1	100	97.519	ENSMUSG00000021938	Pspc1	100	97.519	Mus_musculus
ENSMMUG00000020262	PSPC1	100	97.328	MGP_PahariEiJ_G0030359	Pspc1	100	97.328	Mus_pahari
ENSMMUG00000020262	PSPC1	100	97.328	MGP_SPRETEiJ_G0020232	Pspc1	100	97.328	Mus_spretus
ENSMMUG00000020262	PSPC1	100	98.088	ENSMPUG00000013347	PSPC1	100	98.088	Mustela_putorius_furo
ENSMMUG00000020262	PSPC1	100	96.198	ENSMLUG00000017663	PSPC1	100	96.198	Myotis_lucifugus
ENSMMUG00000020262	PSPC1	100	96.941	ENSNGAG00000011271	Pspc1	100	96.941	Nannospalax_galili
ENSMMUG00000020262	PSPC1	93	68.839	ENSNBRG00000014059	pspc1	77	69.184	Neolamprologus_brichardi
ENSMMUG00000020262	PSPC1	100	99.044	ENSNLEG00000001294	PSPC1	100	99.044	Nomascus_leucogenys
ENSMMUG00000020262	PSPC1	100	76.291	ENSMEUG00000000476	PSPC1	100	76.291	Notamacropus_eugenii
ENSMMUG00000020262	PSPC1	100	85.660	ENSODEG00000007817	-	100	80.151	Octodon_degus
ENSMMUG00000020262	PSPC1	99	88.553	ENSODEG00000019012	-	100	84.688	Octodon_degus
ENSMMUG00000020262	PSPC1	88	79.630	ENSONIG00000012010	pspc1	87	68.644	Oreochromis_niloticus
ENSMMUG00000020262	PSPC1	99	66.221	ENSOANG00000011381	-	99	63.740	Ornithorhynchus_anatinus
ENSMMUG00000020262	PSPC1	76	97.494	ENSOANG00000009017	-	100	97.494	Ornithorhynchus_anatinus
ENSMMUG00000020262	PSPC1	100	97.897	ENSOCUG00000006153	PSPC1	100	97.897	Oryctolagus_cuniculus
ENSMMUG00000020262	PSPC1	88	79.012	ENSORLG00000004232	-	87	64.182	Oryzias_latipes
ENSMMUG00000020262	PSPC1	88	78.395	ENSORLG00020000578	PSPC1	87	65.199	Oryzias_latipes_hni
ENSMMUG00000020262	PSPC1	88	79.321	ENSORLG00015017480	pspc1	82	68.421	Oryzias_latipes_hsok
ENSMMUG00000020262	PSPC1	57	82.857	ENSOMEG00000003779	pspc1	96	82.775	Oryzias_melastigma
ENSMMUG00000020262	PSPC1	100	98.662	ENSOGAG00000012643	PSPC1	100	98.662	Otolemur_garnettii
ENSMMUG00000020262	PSPC1	100	91.048	ENSOARG00000014163	PSPC1	100	91.048	Ovis_aries
ENSMMUG00000020262	PSPC1	90	98.795	ENSPPAG00000009836	PSPC1	94	99.102	Pan_paniscus
ENSMMUG00000020262	PSPC1	100	98.470	ENSPPRG00000008833	PSPC1	100	98.470	Panthera_pardus
ENSMMUG00000020262	PSPC1	100	83.365	ENSPTIG00000016917	PSPC1	100	83.365	Panthera_tigris_altaica
ENSMMUG00000020262	PSPC1	99	99.134	ENSPTRG00000005677	PSPC1	99	99.177	Pan_troglodytes
ENSMMUG00000020262	PSPC1	100	99.809	ENSPANG00000001992	PSPC1	100	99.809	Papio_anubis
ENSMMUG00000020262	PSPC1	91	82.544	ENSPKIG00000003578	pspc1	81	77.880	Paramormyrops_kingsleyae
ENSMMUG00000020262	PSPC1	99	86.654	ENSPSIG00000005168	PSPC1	89	93.790	Pelodiscus_sinensis
ENSMMUG00000020262	PSPC1	83	70.476	ENSPMGG00000015135	pspc1	80	73.611	Periophthalmus_magnuspinnatus
ENSMMUG00000020262	PSPC1	100	97.323	ENSPEMG00000015214	Pspc1	100	97.323	Peromyscus_maniculatus_bairdii
ENSMMUG00000020262	PSPC1	69	47.692	ENSPMAG00000004618	pspc1	79	47.692	Petromyzon_marinus
ENSMMUG00000020262	PSPC1	99	96.743	ENSPCIG00000017680	PSPC1	100	96.743	Phascolarctos_cinereus
ENSMMUG00000020262	PSPC1	94	73.961	ENSPFOG00000003362	pspc1	88	67.865	Poecilia_formosa
ENSMMUG00000020262	PSPC1	81	68.106	ENSPLAG00000004407	-	52	60.647	Poecilia_latipinna
ENSMMUG00000020262	PSPC1	94	73.961	ENSPLAG00000011540	pspc1	87	67.865	Poecilia_latipinna
ENSMMUG00000020262	PSPC1	80	68.919	ENSPMEG00000001025	-	51	60.647	Poecilia_mexicana
ENSMMUG00000020262	PSPC1	94	73.407	ENSPMEG00000008322	pspc1	87	67.442	Poecilia_mexicana
ENSMMUG00000020262	PSPC1	94	73.130	ENSPREG00000007786	pspc1	87	67.442	Poecilia_reticulata
ENSMMUG00000020262	PSPC1	100	98.734	ENSPPYG00000005186	PSPC1	100	98.734	Pongo_abelii
ENSMMUG00000020262	PSPC1	68	100.000	ENSPCAG00000008314	-	66	100.000	Procavia_capensis
ENSMMUG00000020262	PSPC1	100	94.073	ENSPCOG00000014364	PSPC1	100	94.073	Propithecus_coquereli
ENSMMUG00000020262	PSPC1	100	93.117	ENSPVAG00000005036	PSPC1	100	93.308	Pteropus_vampyrus
ENSMMUG00000020262	PSPC1	88	71.865	ENSPNYG00000008893	pspc1	87	58.672	Pundamilia_nyererei
ENSMMUG00000020262	PSPC1	89	80.363	ENSPNAG00000016511	pspc1	89	72.399	Pygocentrus_nattereri
ENSMMUG00000020262	PSPC1	100	97.132	ENSRNOG00000020782	Pspc1	100	97.132	Rattus_norvegicus
ENSMMUG00000020262	PSPC1	95	99.143	ENSRBIG00000036057	PSPC1	100	99.179	Rhinopithecus_bieti
ENSMMUG00000020262	PSPC1	100	99.235	ENSRROG00000036334	PSPC1	100	99.235	Rhinopithecus_roxellana
ENSMMUG00000020262	PSPC1	74	97.426	ENSSBOG00000028172	PSPC1	90	97.810	Saimiri_boliviensis_boliviensis
ENSMMUG00000020262	PSPC1	100	91.429	ENSSHAG00000004696	PSPC1	100	91.429	Sarcophilus_harrisii
ENSMMUG00000020262	PSPC1	88	85.802	ENSSFOG00015001395	pspc1	89	78.505	Scleropages_formosus
ENSMMUG00000020262	PSPC1	95	74.302	ENSSMAG00000001761	pspc1	84	75.811	Scophthalmus_maximus
ENSMMUG00000020262	PSPC1	88	81.173	ENSSDUG00000010651	pspc1	76	73.953	Seriola_dumerili
ENSMMUG00000020262	PSPC1	88	74.233	ENSSLDG00000004284	pspc1	81	61.806	Seriola_lalandi_dorsalis
ENSMMUG00000020262	PSPC1	100	88.910	ENSSARG00000000888	PSPC1	100	89.101	Sorex_araneus
ENSMMUG00000020262	PSPC1	86	65.839	ENSSPUG00000001136	-	53	61.453	Sphenodon_punctatus
ENSMMUG00000020262	PSPC1	99	75.094	ENSSPUG00000008550	PSPC1	88	81.250	Sphenodon_punctatus
ENSMMUG00000020262	PSPC1	93	77.843	ENSSPAG00000001921	pspc1	77	72.558	Stegastes_partitus
ENSMMUG00000020262	PSPC1	100	96.947	ENSSSCG00000009569	PSPC1	100	96.947	Sus_scrofa
ENSMMUG00000020262	PSPC1	89	96.364	ENSTGUG00000011295	PSPC1	100	94.647	Taeniopygia_guttata
ENSMMUG00000020262	PSPC1	88	71.296	ENSTRUG00000011335	pspc1	77	66.180	Takifugu_rubripes
ENSMMUG00000020262	PSPC1	88	73.148	ENSTNIG00000010358	pspc1	84	66.746	Tetraodon_nigroviridis
ENSMMUG00000020262	PSPC1	99	80.087	ENSTBEG00000002361	PSPC1	100	75.908	Tupaia_belangeri
ENSMMUG00000020262	PSPC1	100	96.750	ENSTTRG00000003343	PSPC1	100	96.750	Tursiops_truncatus
ENSMMUG00000020262	PSPC1	85	99.048	ENSUAMG00000012309	PSPC1	100	98.575	Ursus_americanus
ENSMMUG00000020262	PSPC1	95	98.857	ENSUMAG00000013993	PSPC1	100	98.563	Ursus_maritimus
ENSMMUG00000020262	PSPC1	76	99.248	ENSVPAG00000010029	PSPC1	100	99.248	Vicugna_pacos
ENSMMUG00000020262	PSPC1	100	98.470	ENSVVUG00000006414	PSPC1	100	98.705	Vulpes_vulpes
ENSMMUG00000020262	PSPC1	94	73.056	ENSXCOG00000017438	pspc1	78	77.134	Xiphophorus_couchianus
ENSMMUG00000020262	PSPC1	94	73.333	ENSXMAG00000007929	pspc1	78	77.439	Xiphophorus_maculatus