EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000020428 (Gene tree)
Gene ID: 701680
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 104031 bases
Position: chr20:23441891-23545921
Accession: 701680
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000026882	Ago_hook	PF10427.9	3.1e-19	1	1
ENSMMUP00000026881	Ago_hook	PF10427.9	5.4e-19	1	1
ENSMMUP00000026884	Ago_hook	PF10427.9	6.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000028729	TNRC6A-203	5730	XM_015125816	ENSMMUP00000026881	1909 (aa)	XP_014981302	F6TUN2
ENSMMUT00000028730	TNRC6A-202	5877	XM_015125815	ENSMMUP00000026882	1958 (aa)	XP_014981301	F6TUM5
ENSMMUT00000028732	TNRC6A-201	9958	XM_015125813	ENSMMUP00000026884	1969 (aa)	XP_014981299	F6TUK7

Gene Model

Click here to download ENSMMUG00000020428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000020428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000020428	TNRC6A	98	40.649	ENSMMUG00000021345	TNRC6B	94	45.283
ENSMMUG00000020428	TNRC6A	98	42.808	ENSMMUG00000011924	TNRC6C	98	43.472

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000020428	TNRC6A	100	98.930	ENSG00000090905	TNRC6A	100	98.930	Homo_sapiens
ENSMMUG00000020428	TNRC6A	98	96.656	ENSAMEG00000009333	TNRC6A	100	96.656	Ailuropoda_melanoleuca
ENSMMUG00000020428	TNRC6A	97	82.046	ENSAPLG00000009978	TNRC6A	100	82.046	Anas_platyrhynchos
ENSMMUG00000020428	TNRC6A	100	54.581	ENSACAG00000011857	TNRC6A	100	56.621	Anolis_carolinensis
ENSMMUG00000020428	TNRC6A	100	98.774	ENSANAG00000025252	TNRC6A	100	98.774	Aotus_nancymaae
ENSMMUG00000020428	TNRC6A	91	56.365	ENSAMXG00000019919	tnrc6a	99	56.876	Astyanax_mexicanus
ENSMMUG00000020428	TNRC6A	100	95.443	ENSBTAG00000017999	TNRC6A	100	95.024	Bos_taurus
ENSMMUG00000020428	TNRC6A	100	98.934	ENSCJAG00000020677	TNRC6A	100	98.934	Callithrix_jacchus
ENSMMUG00000020428	TNRC6A	99	96.580	ENSCAFG00000017531	TNRC6A	100	96.580	Canis_familiaris
ENSMMUG00000020428	TNRC6A	98	94.635	ENSCAFG00020021160	TNRC6A	99	95.123	Canis_lupus_dingo
ENSMMUG00000020428	TNRC6A	100	95.076	ENSCHIG00000019448	TNRC6A	100	95.108	Capra_hircus
ENSMMUG00000020428	TNRC6A	100	96.731	ENSTSYG00000012711	TNRC6A	100	96.731	Carlito_syrichta
ENSMMUG00000020428	TNRC6A	99	96.172	ENSCPOG00000036684	TNRC6A	100	96.172	Cavia_porcellus
ENSMMUG00000020428	TNRC6A	100	98.979	ENSCCAG00000033664	TNRC6A	100	98.979	Cebus_capucinus
ENSMMUG00000020428	TNRC6A	99	99.002	ENSCATG00000019284	TNRC6A	99	99.002	Cercocebus_atys
ENSMMUG00000020428	TNRC6A	100	91.723	ENSCLAG00000010217	TNRC6A	100	91.723	Chinchilla_lanigera
ENSMMUG00000020428	TNRC6A	100	99.337	ENSCSAG00000006561	TNRC6A	100	99.337	Chlorocebus_sabaeus
ENSMMUG00000020428	TNRC6A	95	91.695	ENSCHOG00000009374	TNRC6A	95	91.695	Choloepus_hoffmanni
ENSMMUG00000020428	TNRC6A	90	82.506	ENSCPBG00000001881	TNRC6A	99	82.506	Chrysemys_picta_bellii
ENSMMUG00000020428	TNRC6A	100	99.187	ENSCANG00000041549	TNRC6A	100	99.187	Colobus_angolensis_palliatus
ENSMMUG00000020428	TNRC6A	100	94.660	ENSCGRG00001015021	Tnrc6a	100	94.555	Cricetulus_griseus_chok1gshd
ENSMMUG00000020428	TNRC6A	99	93.763	ENSCGRG00000013351	Tnrc6a	99	93.449	Cricetulus_griseus_crigri
ENSMMUG00000020428	TNRC6A	91	56.474	ENSDARG00000079688	tnrc6a	99	57.071	Danio_rerio
ENSMMUG00000020428	TNRC6A	98	93.838	ENSDNOG00000013989	TNRC6A	99	93.786	Dasypus_novemcinctus
ENSMMUG00000020428	TNRC6A	98	85.497	ENSETEG00000014658	TNRC6A	99	85.445	Echinops_telfairi
ENSMMUG00000020428	TNRC6A	100	96.478	ENSEASG00005017693	TNRC6A	100	96.944	Equus_asinus_asinus
ENSMMUG00000020428	TNRC6A	100	96.478	ENSECAG00000025056	TNRC6A	100	96.944	Equus_caballus
ENSMMUG00000020428	TNRC6A	98	89.504	ENSEEUG00000004530	TNRC6A	99	89.504	Erinaceus_europaeus
ENSMMUG00000020428	TNRC6A	100	95.301	ENSFCAG00000025236	TNRC6A	100	95.250	Felis_catus
ENSMMUG00000020428	TNRC6A	99	79.093	ENSFALG00000003757	TNRC6A	99	79.990	Ficedula_albicollis
ENSMMUG00000020428	TNRC6A	90	82.536	ENSGALG00000006068	TNRC6A	99	82.939	Gallus_gallus
ENSMMUG00000020428	TNRC6A	90	81.714	ENSGAGG00000023209	TNRC6A	99	82.001	Gopherus_agassizii
ENSMMUG00000020428	TNRC6A	99	98.766	ENSGGOG00000005137	TNRC6A	99	98.766	Gorilla_gorilla
ENSMMUG00000020428	TNRC6A	94	75.266	ENSHGLG00000007368	-	99	70.000	Heterocephalus_glaber_female
ENSMMUG00000020428	TNRC6A	99	94.062	ENSHGLG00000012474	-	100	93.957	Heterocephalus_glaber_female
ENSMMUG00000020428	TNRC6A	99	93.589	ENSHGLG00100012496	-	100	93.537	Heterocephalus_glaber_male
ENSMMUG00000020428	TNRC6A	99	96.029	ENSSTOG00000023394	TNRC6A	99	96.029	Ictidomys_tridecemlineatus
ENSMMUG00000020428	TNRC6A	97	69.628	ENSLACG00000006277	TNRC6A	100	70.351	Latimeria_chalumnae
ENSMMUG00000020428	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSMMUG00000020428	TNRC6A	98	94.579	ENSLAFG00000004209	TNRC6A	99	94.683	Loxodonta_africana
ENSMMUG00000020428	TNRC6A	97	98.907	ENSMFAG00000003824	TNRC6A	99	98.907	Macaca_fascicularis
ENSMMUG00000020428	TNRC6A	100	99.746	ENSMNEG00000034854	TNRC6A	100	99.746	Macaca_nemestrina
ENSMMUG00000020428	TNRC6A	100	95.709	ENSMLEG00000042737	TNRC6A	99	95.709	Mandrillus_leucophaeus
ENSMMUG00000020428	TNRC6A	99	80.030	ENSMGAG00000006455	TNRC6A	99	80.536	Meleagris_gallopavo
ENSMMUG00000020428	TNRC6A	100	94.607	ENSMAUG00000012750	Tnrc6a	100	94.555	Mesocricetus_auratus
ENSMMUG00000020428	TNRC6A	100	97.808	ENSMICG00000030685	TNRC6A	100	97.808	Microcebus_murinus
ENSMMUG00000020428	TNRC6A	100	94.971	ENSMOCG00000000152	Tnrc6a	100	94.709	Microtus_ochrogaster
ENSMMUG00000020428	TNRC6A	99	80.974	ENSMODG00000016348	TNRC6A	99	82.166	Monodelphis_domestica
ENSMMUG00000020428	TNRC6A	99	93.129	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.639	Mus_caroli
ENSMMUG00000020428	TNRC6A	100	93.714	ENSMUSG00000052707	Tnrc6a	99	94.996	Mus_musculus
ENSMMUG00000020428	TNRC6A	99	93.872	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.282	Mus_pahari
ENSMMUG00000020428	TNRC6A	100	93.769	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.996	Mus_spretus
ENSMMUG00000020428	TNRC6A	97	84.247	ENSMPUG00000012324	TNRC6A	100	84.140	Mustela_putorius_furo
ENSMMUG00000020428	TNRC6A	97	92.857	ENSMLUG00000002701	TNRC6A	100	92.805	Myotis_lucifugus
ENSMMUG00000020428	TNRC6A	99	95.755	ENSNGAG00000020702	Tnrc6a	100	95.702	Nannospalax_galili
ENSMMUG00000020428	TNRC6A	98	96.800	ENSNLEG00000011851	TNRC6A	99	96.800	Nomascus_leucogenys
ENSMMUG00000020428	TNRC6A	77	89.480	ENSMEUG00000015959	-	77	89.480	Notamacropus_eugenii
ENSMMUG00000020428	TNRC6A	96	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSMMUG00000020428	TNRC6A	99	89.958	ENSODEG00000012802	TNRC6A	99	89.693	Octodon_degus
ENSMMUG00000020428	TNRC6A	87	83.314	ENSOANG00000007672	TNRC6A	99	83.314	Ornithorhynchus_anatinus
ENSMMUG00000020428	TNRC6A	97	93.071	ENSOCUG00000004325	TNRC6A	100	93.018	Oryctolagus_cuniculus
ENSMMUG00000020428	TNRC6A	99	97.066	ENSOGAG00000006666	TNRC6A	100	97.066	Otolemur_garnettii
ENSMMUG00000020428	TNRC6A	99	94.251	ENSOARG00000017950	TNRC6A	100	93.840	Ovis_aries
ENSMMUG00000020428	TNRC6A	99	98.983	ENSPPAG00000028379	TNRC6A	100	98.983	Pan_paniscus
ENSMMUG00000020428	TNRC6A	100	95.301	ENSPPRG00000005861	TNRC6A	100	95.250	Panthera_pardus
ENSMMUG00000020428	TNRC6A	99	94.493	ENSPTIG00000006346	TNRC6A	99	94.493	Panthera_tigris_altaica
ENSMMUG00000020428	TNRC6A	99	97.343	ENSPTRG00000007898	TNRC6A	99	97.343	Pan_troglodytes
ENSMMUG00000020428	TNRC6A	100	97.156	ENSPANG00000018523	TNRC6A	100	97.156	Papio_anubis
ENSMMUG00000020428	TNRC6A	87	75.862	ENSPKIG00000012859	tnrc6a	96	79.459	Paramormyrops_kingsleyae
ENSMMUG00000020428	TNRC6A	77	77.703	ENSPSIG00000003965	TNRC6A	100	77.703	Pelodiscus_sinensis
ENSMMUG00000020428	TNRC6A	100	94.500	ENSPEMG00000016318	Tnrc6a	100	94.651	Peromyscus_maniculatus_bairdii
ENSMMUG00000020428	TNRC6A	97	83.778	ENSPCIG00000012106	TNRC6A	100	84.040	Phascolarctos_cinereus
ENSMMUG00000020428	TNRC6A	99	98.475	ENSPPYG00000007202	TNRC6A	100	98.475	Pongo_abelii
ENSMMUG00000020428	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSMMUG00000020428	TNRC6A	100	95.461	ENSPCOG00000010134	TNRC6A	100	95.461	Propithecus_coquereli
ENSMMUG00000020428	TNRC6A	89	71.060	ENSPVAG00000012066	TNRC6A	99	70.888	Pteropus_vampyrus
ENSMMUG00000020428	TNRC6A	100	94.105	ENSRNOG00000024737	Tnrc6a	100	93.897	Rattus_norvegicus
ENSMMUG00000020428	TNRC6A	99	99.275	ENSRBIG00000014222	TNRC6A	100	99.275	Rhinopithecus_bieti
ENSMMUG00000020428	TNRC6A	100	99.132	ENSRROG00000032360	TNRC6A	100	99.132	Rhinopithecus_roxellana
ENSMMUG00000020428	TNRC6A	98	98.064	ENSSBOG00000036197	TNRC6A	100	99.356	Saimiri_boliviensis_boliviensis
ENSMMUG00000020428	TNRC6A	90	83.875	ENSSHAG00000008811	TNRC6A	99	84.330	Sarcophilus_harrisii
ENSMMUG00000020428	TNRC6A	87	67.515	ENSSFOG00015008920	tnrc6a	99	63.910	Scleropages_formosus
ENSMMUG00000020428	TNRC6A	72	83.877	ENSSARG00000002479	TNRC6A	89	83.152	Sorex_araneus
ENSMMUG00000020428	TNRC6A	90	79.003	ENSSPUG00000010525	TNRC6A	100	79.003	Sphenodon_punctatus
ENSMMUG00000020428	TNRC6A	100	96.294	ENSSSCG00000038870	TNRC6A	99	100.000	Sus_scrofa
ENSMMUG00000020428	TNRC6A	99	79.833	ENSTGUG00000006142	TNRC6A	100	80.302	Taeniopygia_guttata
ENSMMUG00000020428	TNRC6A	98	94.569	ENSTBEG00000014965	TNRC6A	100	94.569	Tupaia_belangeri
ENSMMUG00000020428	TNRC6A	94	98.058	ENSTTRG00000002008	TNRC6A	93	98.058	Tursiops_truncatus
ENSMMUG00000020428	TNRC6A	79	95.542	ENSUAMG00000006656	-	93	95.542	Ursus_americanus
ENSMMUG00000020428	TNRC6A	99	95.440	ENSUMAG00000008274	TNRC6A	100	97.470	Ursus_maritimus
ENSMMUG00000020428	TNRC6A	57	85.493	ENSVPAG00000010764	-	57	85.493	Vicugna_pacos
ENSMMUG00000020428	TNRC6A	99	96.655	ENSVVUG00000005380	TNRC6A	100	96.637	Vulpes_vulpes
ENSMMUG00000020428	TNRC6A	94	65.774	ENSXETG00000030437	TNRC6A	99	66.181	Xenopus_tropicalis