EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000021703 (Gene tree)
Gene ID: 712397
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 84002 bases
Position: chr1:210663383-210747384
Accession: 712397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000028576	SpoU_methylase	PF00588.19	8.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000030535	TARBP1-201	4830	XM_001102931	ENSMMUP00000028576	1609 (aa)	XP_001102931	F7EZY1

Gene Model

Click here to download ENSMMUG00000021703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000021703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000021703	TARBP1	100	94.092	ENSG00000059588	TARBP1	100	93.846	Homo_sapiens
ENSMMUG00000021703	TARBP1	99	41.096	ENSAPOG00000016419	si:dkey-85a20.4	88	43.712	Acanthochromis_polyacanthus
ENSMMUG00000021703	TARBP1	84	82.615	ENSAMEG00000003359	TARBP1	100	82.615	Ailuropoda_melanoleuca
ENSMMUG00000021703	TARBP1	99	41.138	ENSATEG00000020266	si:dkey-85a20.4	85	44.343	Anabas_testudineus
ENSMMUG00000021703	TARBP1	83	65.864	ENSAPLG00000007666	TARBP1	100	65.864	Anas_platyrhynchos
ENSMMUG00000021703	TARBP1	99	56.924	ENSACAG00000001142	TARBP1	99	56.514	Anolis_carolinensis
ENSMMUG00000021703	TARBP1	93	88.990	ENSANAG00000022031	TARBP1	100	84.104	Aotus_nancymaae
ENSMMUG00000021703	TARBP1	99	82.031	ENSBTAG00000004517	TARBP1	99	83.333	Bos_taurus
ENSMMUG00000021703	TARBP1	100	91.569	ENSCJAG00000018155	TARBP1	100	91.374	Callithrix_jacchus
ENSMMUG00000021703	TARBP1	88	82.578	ENSCAFG00000011533	TARBP1	100	82.839	Canis_familiaris
ENSMMUG00000021703	TARBP1	99	81.985	ENSCAFG00020027141	TARBP1	99	82.721	Canis_lupus_dingo
ENSMMUG00000021703	TARBP1	99	80.639	ENSCHIG00000011437	TARBP1	99	81.377	Capra_hircus
ENSMMUG00000021703	TARBP1	81	85.050	ENSTSYG00000010382	TARBP1	97	85.050	Carlito_syrichta
ENSMMUG00000021703	TARBP1	78	66.172	ENSCAPG00000010831	TARBP1	99	66.172	Cavia_aperea
ENSMMUG00000021703	TARBP1	99	74.028	ENSCPOG00000013995	TARBP1	99	74.090	Cavia_porcellus
ENSMMUG00000021703	TARBP1	100	92.062	ENSCCAG00000037278	TARBP1	100	91.867	Cebus_capucinus
ENSMMUG00000021703	TARBP1	100	96.123	ENSCATG00000011754	TARBP1	100	96.123	Cercocebus_atys
ENSMMUG00000021703	TARBP1	83	80.000	ENSCLAG00000003655	TARBP1	99	80.000	Chinchilla_lanigera
ENSMMUG00000021703	TARBP1	79	95.497	ENSCSAG00000010100	TARBP1	100	95.497	Chlorocebus_sabaeus
ENSMMUG00000021703	TARBP1	90	69.324	ENSCPBG00000005587	TARBP1	99	68.519	Chrysemys_picta_bellii
ENSMMUG00000021703	TARBP1	84	95.448	ENSCANG00000034343	TARBP1	100	95.448	Colobus_angolensis_palliatus
ENSMMUG00000021703	TARBP1	99	72.267	ENSCGRG00001016690	Tarbp1	99	71.958	Cricetulus_griseus_chok1gshd
ENSMMUG00000021703	TARBP1	91	73.503	ENSCGRG00000016893	Tarbp1	99	74.198	Cricetulus_griseus_crigri
ENSMMUG00000021703	TARBP1	99	39.744	ENSCSEG00000005255	si:dkey-85a20.4	89	45.292	Cynoglossus_semilaevis
ENSMMUG00000021703	TARBP1	87	44.075	ENSDARG00000079055	si:dkey-85a20.4	99	54.498	Danio_rerio
ENSMMUG00000021703	TARBP1	99	81.073	ENSDNOG00000008637	TARBP1	99	81.073	Dasypus_novemcinctus
ENSMMUG00000021703	TARBP1	80	71.781	ENSDORG00000007984	Tarbp1	100	71.781	Dipodomys_ordii
ENSMMUG00000021703	TARBP1	99	85.065	ENSEASG00005000252	TARBP1	99	84.819	Equus_asinus_asinus
ENSMMUG00000021703	TARBP1	99	85.065	ENSECAG00000023673	TARBP1	99	88.074	Equus_caballus
ENSMMUG00000021703	TARBP1	85	43.472	ENSELUG00000012193	si:dkey-85a20.4	86	43.472	Esox_lucius
ENSMMUG00000021703	TARBP1	99	82.143	ENSFCAG00000014183	TARBP1	99	81.958	Felis_catus
ENSMMUG00000021703	TARBP1	80	65.848	ENSFALG00000013565	TARBP1	99	65.800	Ficedula_albicollis
ENSMMUG00000021703	TARBP1	79	73.186	ENSFDAG00000001308	TARBP1	99	73.262	Fukomys_damarensis
ENSMMUG00000021703	TARBP1	81	54.596	ENSFHEG00000007565	si:dkey-85a20.4	79	54.596	Fundulus_heteroclitus
ENSMMUG00000021703	TARBP1	84	41.583	ENSGMOG00000004549	si:dkey-85a20.4	99	41.655	Gadus_morhua
ENSMMUG00000021703	TARBP1	97	64.500	ENSGALG00000011000	TARBP1	100	58.185	Gallus_gallus
ENSMMUG00000021703	TARBP1	99	40.024	ENSGAFG00000007387	si:dkey-85a20.4	85	43.281	Gambusia_affinis
ENSMMUG00000021703	TARBP1	86	43.649	ENSGACG00000005865	si:dkey-85a20.4	99	43.868	Gasterosteus_aculeatus
ENSMMUG00000021703	TARBP1	99	64.936	ENSGAGG00000012102	TARBP1	98	69.431	Gopherus_agassizii
ENSMMUG00000021703	TARBP1	84	90.487	ENSGGOG00000022879	TARBP1	100	90.487	Gorilla_gorilla
ENSMMUG00000021703	TARBP1	86	45.014	ENSHBUG00000008877	si:dkey-85a20.4	86	45.014	Haplochromis_burtoni
ENSMMUG00000021703	TARBP1	99	75.879	ENSHGLG00000011592	TARBP1	99	75.941	Heterocephalus_glaber_female
ENSMMUG00000021703	TARBP1	96	75.515	ENSHGLG00100015169	TARBP1	99	75.515	Heterocephalus_glaber_male
ENSMMUG00000021703	TARBP1	99	39.191	ENSIPUG00000005249	si:dkey-85a20.4	84	42.335	Ictalurus_punctatus
ENSMMUG00000021703	TARBP1	87	73.057	ENSSTOG00000032291	TARBP1	99	73.057	Ictidomys_tridecemlineatus
ENSMMUG00000021703	TARBP1	95	69.028	ENSJJAG00000017840	Tarbp1	99	69.028	Jaculus_jaculus
ENSMMUG00000021703	TARBP1	79	47.861	ENSKMAG00000017546	si:dkey-85a20.4	75	48.262	Kryptolebias_marmoratus
ENSMMUG00000021703	TARBP1	65	50.599	ENSLBEG00000012132	si:dkey-85a20.4	75	50.732	Labrus_bergylta
ENSMMUG00000021703	TARBP1	99	50.241	ENSLACG00000004337	TARBP1	99	49.668	Latimeria_chalumnae
ENSMMUG00000021703	TARBP1	99	45.075	ENSLOCG00000016214	si:dkey-85a20.4	85	49.013	Lepisosteus_oculatus
ENSMMUG00000021703	TARBP1	96	79.560	ENSLAFG00000011394	TARBP1	100	79.748	Loxodonta_africana
ENSMMUG00000021703	TARBP1	100	98.446	ENSMFAG00000041068	TARBP1	100	98.446	Macaca_fascicularis
ENSMMUG00000021703	TARBP1	100	96.862	ENSMNEG00000045002	TARBP1	100	96.862	Macaca_nemestrina
ENSMMUG00000021703	TARBP1	83	96.021	ENSMLEG00000044182	TARBP1	100	96.021	Mandrillus_leucophaeus
ENSMMUG00000021703	TARBP1	95	42.666	ENSMAMG00000021760	si:dkey-85a20.4	89	44.077	Mastacembelus_armatus
ENSMMUG00000021703	TARBP1	86	44.944	ENSMZEG00005005751	si:dkey-85a20.4	86	45.102	Maylandia_zebra
ENSMMUG00000021703	TARBP1	100	71.420	ENSMAUG00000020968	Tarbp1	99	71.420	Mesocricetus_auratus
ENSMMUG00000021703	TARBP1	99	80.333	ENSMICG00000015280	TARBP1	99	80.222	Microcebus_murinus
ENSMMUG00000021703	TARBP1	99	71.279	ENSMOCG00000004128	Tarbp1	99	71.279	Microtus_ochrogaster
ENSMMUG00000021703	TARBP1	99	40.121	ENSMMOG00000007795	si:dkey-85a20.4	88	42.422	Mola_mola
ENSMMUG00000021703	TARBP1	99	70.801	ENSMODG00000008504	TARBP1	100	70.698	Monodelphis_domestica
ENSMMUG00000021703	TARBP1	85	43.581	ENSMALG00000002916	si:dkey-85a20.4	88	43.174	Monopterus_albus
ENSMMUG00000021703	TARBP1	100	70.172	MGP_CAROLIEiJ_G0031729	Tarbp1	99	70.111	Mus_caroli
ENSMMUG00000021703	TARBP1	100	69.926	ENSMUSG00000090290	Tarbp1	99	69.865	Mus_musculus
ENSMMUG00000021703	TARBP1	99	70.512	MGP_PahariEiJ_G0023326	Tarbp1	99	70.450	Mus_pahari
ENSMMUG00000021703	TARBP1	99	70.259	MGP_SPRETEiJ_G0032846	Tarbp1	99	70.197	Mus_spretus
ENSMMUG00000021703	TARBP1	76	80.402	ENSMPUG00000002802	TARBP1	99	80.402	Mustela_putorius_furo
ENSMMUG00000021703	TARBP1	84	71.895	ENSMLUG00000002414	TARBP1	99	71.895	Myotis_lucifugus
ENSMMUG00000021703	TARBP1	100	94.277	ENSNLEG00000002518	TARBP1	100	94.031	Nomascus_leucogenys
ENSMMUG00000021703	TARBP1	68	77.966	ENSMEUG00000011370	-	67	77.966	Notamacropus_eugenii
ENSMMUG00000021703	TARBP1	74	86.567	ENSOPRG00000013822	TARBP1	71	86.567	Ochotona_princeps
ENSMMUG00000021703	TARBP1	99	71.067	ENSODEG00000005238	TARBP1	99	71.191	Octodon_degus
ENSMMUG00000021703	TARBP1	86	44.881	ENSONIG00000009789	si:dkey-85a20.4	99	44.881	Oreochromis_niloticus
ENSMMUG00000021703	TARBP1	100	82.841	ENSOCUG00000017418	TARBP1	99	82.595	Oryctolagus_cuniculus
ENSMMUG00000021703	TARBP1	99	39.086	ENSORLG00000010529	si:dkey-85a20.4	88	41.478	Oryzias_latipes
ENSMMUG00000021703	TARBP1	99	38.789	ENSORLG00020019264	si:dkey-85a20.4	88	41.285	Oryzias_latipes_hni
ENSMMUG00000021703	TARBP1	99	38.966	ENSORLG00015003276	si:dkey-85a20.4	87	41.455	Oryzias_latipes_hsok
ENSMMUG00000021703	TARBP1	99	81.824	ENSOGAG00000002379	TARBP1	100	81.577	Otolemur_garnettii
ENSMMUG00000021703	TARBP1	98	81.019	ENSOARG00000003434	TARBP1	99	81.085	Ovis_aries
ENSMMUG00000021703	TARBP1	84	94.286	ENSPPAG00000028097	TARBP1	100	94.286	Pan_paniscus
ENSMMUG00000021703	TARBP1	99	89.286	ENSPPRG00000013561	TARBP1	99	70.556	Panthera_pardus
ENSMMUG00000021703	TARBP1	83	82.898	ENSPTIG00000009281	TARBP1	99	82.898	Panthera_tigris_altaica
ENSMMUG00000021703	TARBP1	100	94.338	ENSPTRG00000002124	TARBP1	100	94.338	Pan_troglodytes
ENSMMUG00000021703	TARBP1	100	99.006	ENSPANG00000021933	TARBP1	100	99.006	Papio_anubis
ENSMMUG00000021703	TARBP1	100	42.056	ENSPKIG00000016716	si:dkey-85a20.4	85	45.626	Paramormyrops_kingsleyae
ENSMMUG00000021703	TARBP1	79	68.164	ENSPSIG00000010699	TARBP1	100	68.242	Pelodiscus_sinensis
ENSMMUG00000021703	TARBP1	97	73.182	ENSPEMG00000006888	Tarbp1	99	74.280	Peromyscus_maniculatus_bairdii
ENSMMUG00000021703	TARBP1	92	83.495	ENSPCIG00000029710	TARBP1	99	83.495	Phascolarctos_cinereus
ENSMMUG00000021703	TARBP1	85	43.890	ENSPFOG00000013020	si:dkey-85a20.4	99	43.961	Poecilia_formosa
ENSMMUG00000021703	TARBP1	86	43.927	ENSPLAG00000006044	si:dkey-85a20.4	85	43.927	Poecilia_latipinna
ENSMMUG00000021703	TARBP1	99	40.478	ENSPMEG00000017857	si:dkey-85a20.4	85	43.693	Poecilia_mexicana
ENSMMUG00000021703	TARBP1	93	41.742	ENSPREG00000022753	si:dkey-85a20.4	85	43.583	Poecilia_reticulata
ENSMMUG00000021703	TARBP1	92	97.746	ENSPPYG00000000102	TARBP1	100	97.746	Pongo_abelii
ENSMMUG00000021703	TARBP1	85	93.333	ENSPCAG00000004808	TARBP1	85	93.333	Procavia_capensis
ENSMMUG00000021703	TARBP1	99	85.847	ENSPCOG00000005666	TARBP1	99	85.714	Propithecus_coquereli
ENSMMUG00000021703	TARBP1	98	68.610	ENSPVAG00000014798	TARBP1	97	68.610	Pteropus_vampyrus
ENSMMUG00000021703	TARBP1	86	44.059	ENSPNYG00000019135	si:dkey-85a20.4	85	43.949	Pundamilia_nyererei
ENSMMUG00000021703	TARBP1	100	66.318	ENSRNOG00000053574	Tarbp1	99	66.011	Rattus_norvegicus
ENSMMUG00000021703	TARBP1	98	93.375	ENSRBIG00000043362	TARBP1	100	93.375	Rhinopithecus_bieti
ENSMMUG00000021703	TARBP1	100	90.954	ENSRROG00000029527	TARBP1	100	90.892	Rhinopithecus_roxellana
ENSMMUG00000021703	TARBP1	89	92.177	ENSSBOG00000034503	TARBP1	100	92.239	Saimiri_boliviensis_boliviensis
ENSMMUG00000021703	TARBP1	83	73.270	ENSSHAG00000000013	TARBP1	100	73.270	Sarcophilus_harrisii
ENSMMUG00000021703	TARBP1	83	44.548	ENSSFOG00015002660	si:dkey-85a20.4	97	45.638	Scleropages_formosus
ENSMMUG00000021703	TARBP1	91	43.024	ENSSMAG00000007081	si:dkey-85a20.4	88	43.704	Scophthalmus_maximus
ENSMMUG00000021703	TARBP1	92	41.032	ENSSDUG00000023566	si:dkey-85a20.4	86	42.877	Seriola_dumerili
ENSMMUG00000021703	TARBP1	86	44.787	ENSSLDG00000020200	si:dkey-85a20.4	86	44.857	Seriola_lalandi_dorsalis
ENSMMUG00000021703	TARBP1	89	85.219	ENSSARG00000012207	TARBP1	89	85.219	Sorex_araneus
ENSMMUG00000021703	TARBP1	99	63.071	ENSSPUG00000015364	TARBP1	100	63.010	Sphenodon_punctatus
ENSMMUG00000021703	TARBP1	88	43.758	ENSSPAG00000007213	si:dkey-85a20.4	89	43.758	Stegastes_partitus
ENSMMUG00000021703	TARBP1	99	82.852	ENSSSCG00000010160	TARBP1	99	85.482	Sus_scrofa
ENSMMUG00000021703	TARBP1	80	65.928	ENSTGUG00000010214	TARBP1	100	65.928	Taeniopygia_guttata
ENSMMUG00000021703	TARBP1	91	39.299	ENSTNIG00000016586	si:dkey-85a20.4	99	43.642	Tetraodon_nigroviridis
ENSMMUG00000021703	TARBP1	86	91.111	ENSTTRG00000008707	TARBP1	89	91.111	Tursiops_truncatus
ENSMMUG00000021703	TARBP1	82	82.003	ENSUMAG00000006730	TARBP1	99	82.003	Ursus_maritimus
ENSMMUG00000021703	TARBP1	77	91.753	ENSVPAG00000007665	TARBP1	82	91.753	Vicugna_pacos
ENSMMUG00000021703	TARBP1	87	81.915	ENSVVUG00000007460	TARBP1	97	82.948	Vulpes_vulpes
ENSMMUG00000021703	TARBP1	84	54.923	ENSXETG00000016224	tarbp1	99	54.883	Xenopus_tropicalis
ENSMMUG00000021703	TARBP1	78	48.704	ENSXCOG00000011779	si:dkey-85a20.4	93	48.704	Xiphophorus_couchianus
ENSMMUG00000021703	TARBP1	65	43.018	ENSXMAG00000009600	si:dkey-85a20.4	100	42.924	Xiphophorus_maculatus