EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000022221 (Gene tree)
Gene ID: 716508
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 26851 bases
Position: chr16:7891791-7918641
Accession: 716508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000029254	ResIII	PF04851.15	2.9e-08	1	1
ENSMMUP00000029252	ResIII	PF04851.15	3.1e-08	1	1
ENSMMUP00000057619	ResIII	PF04851.15	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000076824	CHD3-204	831	-	ENSMMUP00000056420	276 (aa)	-	A0A1D5R7Y0
ENSMMUT00000031257	CHD3-202	5949	-	ENSMMUP00000029252	1982 (aa)	-	F6Z8B5
ENSMMUT00000062602	CHD3-201	6267	-	ENSMMUP00000057619	2088 (aa)	-	A0A1D5RBC8
ENSMMUT00000031259	CHD3-203	5883	XM_015118527	ENSMMUP00000029254	1960 (aa)	XP_014974013	F6Z898

Gene Model

Click here to download ENSMMUG00000022221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000022221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000022221	CHD3	89	68.997	ENSMMUG00000018685	-	95	68.136
ENSMMUG00000022221	CHD3	82	85.990	ENSMMUG00000016838	CHD5	98	68.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000022221	CHD3	100	97.200	ENSG00000170004	CHD3	99	98.864	Homo_sapiens
ENSMMUG00000022221	CHD3	85	73.956	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSMMUG00000022221	CHD3	68	92.847	ENSAMEG00000003025	-	100	93.768	Ailuropoda_melanoleuca
ENSMMUG00000022221	CHD3	80	83.516	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSMMUG00000022221	CHD3	89	79.402	ENSAOCG00000023784	chd3	97	81.250	Amphiprion_ocellaris
ENSMMUG00000022221	CHD3	89	79.070	ENSAPEG00000006341	chd3	96	72.118	Amphiprion_percula
ENSMMUG00000022221	CHD3	86	81.017	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSMMUG00000022221	CHD3	97	83.667	ENSACAG00000004276	CHD3	96	82.240	Anolis_carolinensis
ENSMMUG00000022221	CHD3	100	93.950	ENSANAG00000034323	CHD3	99	96.695	Aotus_nancymaae
ENSMMUG00000022221	CHD3	91	78.438	ENSACLG00000009222	chd3	99	72.661	Astatotilapia_calliptera
ENSMMUG00000022221	CHD3	99	95.303	ENSBTAG00000014377	CHD3	97	95.938	Bos_taurus
ENSMMUG00000022221	CHD3	99	96.797	ENSCJAG00000014766	CHD3	99	96.797	Callithrix_jacchus
ENSMMUG00000022221	CHD3	100	95.402	ENSCAFG00000016859	CHD3	100	95.402	Canis_familiaris
ENSMMUG00000022221	CHD3	94	95.631	ENSCAFG00020007422	CHD3	100	95.690	Canis_lupus_dingo
ENSMMUG00000022221	CHD3	99	96.109	ENSCHIG00000016737	CHD3	100	96.109	Capra_hircus
ENSMMUG00000022221	CHD3	100	96.452	ENSTSYG00000035658	CHD3	100	96.452	Carlito_syrichta
ENSMMUG00000022221	CHD3	99	92.323	ENSCAPG00000014864	CHD3	99	92.323	Cavia_aperea
ENSMMUG00000022221	CHD3	99	94.832	ENSCPOG00000022653	CHD3	99	94.832	Cavia_porcellus
ENSMMUG00000022221	CHD3	100	96.650	ENSCCAG00000034792	CHD3	100	96.650	Cebus_capucinus
ENSMMUG00000022221	CHD3	100	97.600	ENSCATG00000041717	CHD3	100	97.600	Cercocebus_atys
ENSMMUG00000022221	CHD3	99	95.540	ENSCLAG00000010523	CHD3	100	95.933	Chinchilla_lanigera
ENSMMUG00000022221	CHD3	99	96.553	ENSCSAG00000011122	CHD3	100	97.257	Chlorocebus_sabaeus
ENSMMUG00000022221	CHD3	89	81.732	ENSCPBG00000011966	CHD3	99	84.973	Chrysemys_picta_bellii
ENSMMUG00000022221	CHD3	100	97.450	ENSCANG00000037641	CHD3	100	97.450	Colobus_angolensis_palliatus
ENSMMUG00000022221	CHD3	99	93.984	ENSCGRG00001011306	Chd3	100	94.970	Cricetulus_griseus_chok1gshd
ENSMMUG00000022221	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSMMUG00000022221	CHD3	90	78.878	ENSCSEG00000004489	chd3	99	75.224	Cynoglossus_semilaevis
ENSMMUG00000022221	CHD3	86	82.661	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSMMUG00000022221	CHD3	94	74.799	ENSDARG00000021405	chd3	95	81.404	Danio_rerio
ENSMMUG00000022221	CHD3	99	80.856	ENSDNOG00000047846	CHD3	98	81.335	Dasypus_novemcinctus
ENSMMUG00000022221	CHD3	99	94.777	ENSDORG00000010713	Chd3	100	95.270	Dipodomys_ordii
ENSMMUG00000022221	CHD3	97	89.084	ENSETEG00000017733	CHD3	100	89.673	Echinops_telfairi
ENSMMUG00000022221	CHD3	71	73.929	ENSEBUG00000008310	chd3	99	68.109	Eptatretus_burgeri
ENSMMUG00000022221	CHD3	92	95.541	ENSEASG00005019360	CHD3	100	96.072	Equus_asinus_asinus
ENSMMUG00000022221	CHD3	92	95.650	ENSECAG00000010051	CHD3	100	96.127	Equus_caballus
ENSMMUG00000022221	CHD3	91	96.610	ENSEEUG00000015205	CHD3	92	98.077	Erinaceus_europaeus
ENSMMUG00000022221	CHD3	77	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSMMUG00000022221	CHD3	99	95.086	ENSFCAG00000009629	CHD3	96	95.683	Felis_catus
ENSMMUG00000022221	CHD3	99	92.688	ENSFDAG00000008220	CHD3	99	93.041	Fukomys_damarensis
ENSMMUG00000022221	CHD3	88	78.419	ENSGMOG00000013599	chd3	91	78.116	Gadus_morhua
ENSMMUG00000022221	CHD3	59	74.829	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSMMUG00000022221	CHD3	97	69.188	ENSGACG00000019275	chd3	100	69.618	Gasterosteus_aculeatus
ENSMMUG00000022221	CHD3	75	84.806	ENSGAGG00000013164	CHD3	99	84.274	Gopherus_agassizii
ENSMMUG00000022221	CHD3	100	97.050	ENSGGOG00000013496	CHD3	100	97.050	Gorilla_gorilla
ENSMMUG00000022221	CHD3	99	95.245	ENSHGLG00000012017	CHD3	99	94.945	Heterocephalus_glaber_female
ENSMMUG00000022221	CHD3	88	90.668	ENSHGLG00100013902	CHD3	99	89.730	Heterocephalus_glaber_male
ENSMMUG00000022221	CHD3	93	71.260	ENSHCOG00000010170	chd3	96	70.716	Hippocampus_comes
ENSMMUG00000022221	CHD3	84	78.758	ENSIPUG00000003271	chd3	96	77.668	Ictalurus_punctatus
ENSMMUG00000022221	CHD3	99	96.046	ENSSTOG00000025907	CHD3	100	96.394	Ictidomys_tridecemlineatus
ENSMMUG00000022221	CHD3	100	94.303	ENSJJAG00000017633	Chd3	100	95.170	Jaculus_jaculus
ENSMMUG00000022221	CHD3	86	90.047	ENSKMAG00000019292	chd3	97	73.830	Kryptolebias_marmoratus
ENSMMUG00000022221	CHD3	90	72.528	ENSLBEG00000028485	chd3	92	81.890	Labrus_bergylta
ENSMMUG00000022221	CHD3	95	74.029	ENSLACG00000008031	CHD3	99	73.310	Latimeria_chalumnae
ENSMMUG00000022221	CHD3	97	76.018	ENSLOCG00000013965	chd3	97	76.153	Lepisosteus_oculatus
ENSMMUG00000022221	CHD3	95	91.481	ENSLAFG00000000572	CHD3	100	91.945	Loxodonta_africana
ENSMMUG00000022221	CHD3	100	97.650	ENSMFAG00000020113	CHD3	100	97.650	Macaca_fascicularis
ENSMMUG00000022221	CHD3	100	97.550	ENSMNEG00000001728	CHD3	100	97.550	Macaca_nemestrina
ENSMMUG00000022221	CHD3	100	97.600	ENSMLEG00000032249	CHD3	100	97.600	Mandrillus_leucophaeus
ENSMMUG00000022221	CHD3	85	74.342	ENSMAMG00000000564	chd3	95	80.729	Mastacembelus_armatus
ENSMMUG00000022221	CHD3	99	93.684	ENSMAUG00000013873	Chd3	99	92.127	Mesocricetus_auratus
ENSMMUG00000022221	CHD3	99	95.657	ENSMICG00000008741	CHD3	100	93.220	Microcebus_murinus
ENSMMUG00000022221	CHD3	98	95.163	ENSMOCG00000004848	Chd3	100	95.163	Microtus_ochrogaster
ENSMMUG00000022221	CHD3	86	87.597	ENSMMOG00000012699	chd3	94	86.923	Mola_mola
ENSMMUG00000022221	CHD3	92	90.989	ENSMODG00000007509	CHD3	100	90.700	Monodelphis_domestica
ENSMMUG00000022221	CHD3	99	93.841	MGP_CAROLIEiJ_G0016564	Chd3	100	92.865	Mus_caroli
ENSMMUG00000022221	CHD3	99	93.942	ENSMUSG00000018474	Chd3	99	93.073	Mus_musculus
ENSMMUG00000022221	CHD3	99	94.444	MGP_PahariEiJ_G0017695	Chd3	100	93.330	Mus_pahari
ENSMMUG00000022221	CHD3	99	93.942	MGP_SPRETEiJ_G0017400	Chd3	100	93.073	Mus_spretus
ENSMMUG00000022221	CHD3	86	94.706	ENSMPUG00000008861	CHD3	100	95.216	Mustela_putorius_furo
ENSMMUG00000022221	CHD3	100	94.605	ENSMLUG00000014643	-	100	94.605	Myotis_lucifugus
ENSMMUG00000022221	CHD3	99	94.861	ENSNGAG00000000773	Chd3	99	94.861	Nannospalax_galili
ENSMMUG00000022221	CHD3	85	74.351	ENSNBRG00000000636	chd3	98	73.504	Neolamprologus_brichardi
ENSMMUG00000022221	CHD3	98	94.172	ENSNLEG00000009770	CHD3	100	94.204	Nomascus_leucogenys
ENSMMUG00000022221	CHD3	85	91.111	ENSMEUG00000005852	CHD3	87	91.111	Notamacropus_eugenii
ENSMMUG00000022221	CHD3	94	94.074	ENSOPRG00000011069	CHD3	100	94.228	Ochotona_princeps
ENSMMUG00000022221	CHD3	99	95.075	ENSODEG00000017785	CHD3	100	95.075	Octodon_degus
ENSMMUG00000022221	CHD3	94	72.675	ENSONIG00000009292	chd3	100	73.108	Oreochromis_niloticus
ENSMMUG00000022221	CHD3	98	91.247	ENSOCUG00000029299	CHD3	100	91.150	Oryctolagus_cuniculus
ENSMMUG00000022221	CHD3	82	69.710	ENSORLG00000007107	chd3	93	69.515	Oryzias_latipes
ENSMMUG00000022221	CHD3	58	72.840	ENSORLG00020008387	chd3	95	73.698	Oryzias_latipes_hni
ENSMMUG00000022221	CHD3	80	77.175	ENSOMEG00000013691	chd3	99	75.557	Oryzias_melastigma
ENSMMUG00000022221	CHD3	99	95.390	ENSOGAG00000003216	CHD3	100	95.939	Otolemur_garnettii
ENSMMUG00000022221	CHD3	99	92.911	ENSOARG00000017855	CHD3	99	93.160	Ovis_aries
ENSMMUG00000022221	CHD3	100	95.693	ENSPPAG00000032886	CHD3	100	95.693	Pan_paniscus
ENSMMUG00000022221	CHD3	99	95.236	ENSPPRG00000000626	CHD3	99	95.250	Panthera_pardus
ENSMMUG00000022221	CHD3	100	97.250	ENSPTRG00000008714	CHD3	100	97.250	Pan_troglodytes
ENSMMUG00000022221	CHD3	100	97.600	ENSPANG00000023938	CHD3	100	97.600	Papio_anubis
ENSMMUG00000022221	CHD3	94	77.665	ENSPKIG00000006305	chd3	99	77.545	Paramormyrops_kingsleyae
ENSMMUG00000022221	CHD3	55	90.511	ENSPSIG00000010177	CHD3	98	90.785	Pelodiscus_sinensis
ENSMMUG00000022221	CHD3	99	94.604	ENSPEMG00000014262	Chd3	100	94.604	Peromyscus_maniculatus_bairdii
ENSMMUG00000022221	CHD3	99	91.743	ENSPCIG00000005442	CHD3	99	95.935	Phascolarctos_cinereus
ENSMMUG00000022221	CHD3	90	81.507	ENSPFOG00000012464	chd3	92	72.050	Poecilia_formosa
ENSMMUG00000022221	CHD3	87	83.600	ENSPLAG00000002887	chd3	96	83.600	Poecilia_latipinna
ENSMMUG00000022221	CHD3	54	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSMMUG00000022221	CHD3	90	84.502	ENSPREG00000011044	chd3	99	77.419	Poecilia_reticulata
ENSMMUG00000022221	CHD3	100	92.300	ENSPPYG00000007940	CHD3	100	92.300	Pongo_abelii
ENSMMUG00000022221	CHD3	95	97.388	ENSPCAG00000004350	CHD3	96	97.388	Procavia_capensis
ENSMMUG00000022221	CHD3	100	95.904	ENSPCOG00000020952	CHD3	100	95.904	Propithecus_coquereli
ENSMMUG00000022221	CHD3	85	94.952	ENSPVAG00000016344	CHD3	87	94.952	Pteropus_vampyrus
ENSMMUG00000022221	CHD3	94	77.122	ENSPNAG00000020393	chd3	98	79.359	Pygocentrus_nattereri
ENSMMUG00000022221	CHD3	92	93.174	ENSRNOG00000009722	Chd3	100	93.736	Rattus_norvegicus
ENSMMUG00000022221	CHD3	100	95.188	ENSRBIG00000033562	CHD3	100	95.188	Rhinopithecus_bieti
ENSMMUG00000022221	CHD3	100	96.723	ENSRROG00000029554	CHD3	100	96.723	Rhinopithecus_roxellana
ENSMMUG00000022221	CHD3	100	96.750	ENSSBOG00000020719	CHD3	100	96.750	Saimiri_boliviensis_boliviensis
ENSMMUG00000022221	CHD3	98	91.658	ENSSHAG00000014412	CHD3	100	91.198	Sarcophilus_harrisii
ENSMMUG00000022221	CHD3	86	78.781	ENSSFOG00015023123	chd3	98	73.099	Scleropages_formosus
ENSMMUG00000022221	CHD3	79	91.304	ENSSMAG00000006451	chd3	95	80.208	Scophthalmus_maximus
ENSMMUG00000022221	CHD3	56	72.570	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSMMUG00000022221	CHD3	89	80.135	ENSSPAG00000013694	chd3	99	78.566	Stegastes_partitus
ENSMMUG00000022221	CHD3	99	95.593	ENSSSCG00000021363	CHD3	100	95.583	Sus_scrofa
ENSMMUG00000022221	CHD3	76	73.168	ENSTRUG00000014990	chd3	89	74.391	Takifugu_rubripes
ENSMMUG00000022221	CHD3	96	71.845	ENSTNIG00000012998	chd3	96	76.524	Tetraodon_nigroviridis
ENSMMUG00000022221	CHD3	64	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSMMUG00000022221	CHD3	98	99.383	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSMMUG00000022221	CHD3	92	93.869	ENSUAMG00000005475	CHD3	99	94.502	Ursus_americanus
ENSMMUG00000022221	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSMMUG00000022221	CHD3	95	95.130	ENSVVUG00000028011	CHD3	99	95.631	Vulpes_vulpes
ENSMMUG00000022221	CHD3	97	71.334	ENSXETG00000012991	chd3	92	72.143	Xenopus_tropicalis
ENSMMUG00000022221	CHD3	52	82.751	ENSXCOG00000000809	chd3	96	82.976	Xiphophorus_couchianus
ENSMMUG00000022221	CHD3	79	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus