EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSMMUG00000022407 (Gene tree)
Gene ID: 712867
Gene Symbol: SUSD6
Alias: KIAA0247
Full Name: sushi domain containing 6
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 111582 bases
Position: chr7:131883382-131994963
Accession: 712719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000029491	RRM_1	PF00076.22	1.4e-30	1	2
ENSMMUP00000029491	RRM_1	PF00076.22	1.4e-30	2	2
ENSMMUP00000029490	RRM_1	PF00076.22	1.5e-30	1	2
ENSMMUP00000029490	RRM_1	PF00076.22	1.5e-30	2	2
ENSMMUP00000059026	RRM_1	PF00076.22	3.8e-17	1	1
ENSMMUP00000054798	RRM_1	PF00076.22	4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000022038	-	989	XM_015143938	ENSMMUP00000020616	302 (aa)	XP_014999424	F6SMK5
ENSMMUT00000055472	-	300	-	ENSMMUP00000059026	99 (aa)	-	A0A1D5RFD2
ENSMMUT00000055495	-	417	-	ENSMMUP00000054798	138 (aa)	-	A0A1D5R3B2
ENSMMUT00000031519	-	801	-	ENSMMUP00000029491	266 (aa)	-	F6YRM1
ENSMMUT00000031518	-	2502	XM_001109903	ENSMMUP00000029490	272 (aa)	XP_001109903	F6YRM9

Gene Model

Click here to download ENSMMUG00000022407's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03040	Spliceosome	KEGG
mcc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000022407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000022407	SUSD6	86	62.295	ENSMMUG00000006742	SRSF6	50	71.642
ENSMMUG00000022407	SUSD6	80	45.349	ENSMMUG00000040941	-	73	35.503
ENSMMUG00000022407	SUSD6	76	47.561	ENSMMUG00000014306	SRSF3	83	44.340
ENSMMUG00000022407	SUSD6	69	34.783	ENSMMUG00000001089	-	68	34.328
ENSMMUG00000022407	SUSD6	69	37.681	ENSMMUG00000003920	-	69	37.313
ENSMMUG00000022407	SUSD6	57	40.625	ENSMMUG00000040965	-	89	40.625
ENSMMUG00000022407	SUSD6	86	42.742	ENSMMUG00000003260	-	77	45.181
ENSMMUG00000022407	SUSD6	86	45.968	ENSMMUG00000004725	SRSF1	78	61.404
ENSMMUG00000022407	SUSD6	73	40.000	ENSMMUG00000040370	-	80	37.288
ENSMMUG00000022407	SUSD6	86	33.065	ENSMMUG00000016494	SRSF9	53	37.576