EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000022430 (Gene tree)
Gene ID: 697773
Gene Symbol: SF3B1
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 104840 bases
Position: chr2:148966088-149070927
Accession: 697773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000029521	SF3b1	PF08920.10	6.6e-47	1	1
ENSMMUP00000046546	SF3b1	PF08920.10	6.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000031550	-	3933	XM_015131731	ENSMMUP00000029521	1310 (aa)	XP_014987217	F6X4D3
ENSMMUT00000074295	-	5400	-	ENSMMUP00000046546	1328 (aa)	-	A0A1D5QES7

Gene Model

Click here to download ENSMMUG00000022430's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000022430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000022430	SF3B1	99	100.000	ENSG00000115524	SF3B1	99	100.000	Homo_sapiens
ENSMMUG00000022430	SF3B1	99	93.716	ENSAPOG00000011894	sf3b1	99	93.578	Acanthochromis_polyacanthus
ENSMMUG00000022430	SF3B1	99	99.615	ENSAMEG00000013809	SF3B1	99	99.923	Ailuropoda_melanoleuca
ENSMMUG00000022430	SF3B1	99	93.170	ENSACIG00000020910	sf3b1	96	93.016	Amphilophus_citrinellus
ENSMMUG00000022430	SF3B1	99	93.578	ENSAOCG00000004478	sf3b1	99	93.578	Amphiprion_ocellaris
ENSMMUG00000022430	SF3B1	99	93.578	ENSAPEG00000012937	sf3b1	99	93.578	Amphiprion_percula
ENSMMUG00000022430	SF3B1	99	93.712	ENSATEG00000020435	sf3b1	99	93.712	Anabas_testudineus
ENSMMUG00000022430	SF3B1	99	99.078	ENSAPLG00000003993	SF3B1	99	99.383	Anas_platyrhynchos
ENSMMUG00000022430	SF3B1	99	98.919	ENSACAG00000009612	SF3B1	99	98.919	Anolis_carolinensis
ENSMMUG00000022430	SF3B1	99	100.000	ENSANAG00000021577	SF3B1	100	100.000	Aotus_nancymaae
ENSMMUG00000022430	SF3B1	99	92.808	ENSACLG00000023470	sf3b1	99	92.655	Astatotilapia_calliptera
ENSMMUG00000022430	SF3B1	99	94.109	ENSAMXG00000002219	sf3b1	99	93.956	Astyanax_mexicanus
ENSMMUG00000022430	SF3B1	99	99.923	ENSBTAG00000008915	SF3B1	99	99.923	Bos_taurus
ENSMMUG00000022430	SF3B1	98	66.415	WBGene00011605	sftb-1	98	66.516	Caenorhabditis_elegans
ENSMMUG00000022430	SF3B1	99	100.000	ENSCJAG00000003902	SF3B1	99	100.000	Callithrix_jacchus
ENSMMUG00000022430	SF3B1	99	100.000	ENSCAFG00000010826	SF3B1	99	100.000	Canis_familiaris
ENSMMUG00000022430	SF3B1	99	100.000	ENSCAFG00020004750	SF3B1	99	100.000	Canis_lupus_dingo
ENSMMUG00000022430	SF3B1	99	99.923	ENSCHIG00000015226	SF3B1	99	99.923	Capra_hircus
ENSMMUG00000022430	SF3B1	99	99.923	ENSTSYG00000009214	SF3B1	99	99.923	Carlito_syrichta
ENSMMUG00000022430	SF3B1	99	99.616	ENSCAPG00000006547	SF3B1	99	100.000	Cavia_aperea
ENSMMUG00000022430	SF3B1	99	100.000	ENSCPOG00000009353	SF3B1	100	100.000	Cavia_porcellus
ENSMMUG00000022430	SF3B1	99	100.000	ENSCCAG00000020506	SF3B1	99	100.000	Cebus_capucinus
ENSMMUG00000022430	SF3B1	99	100.000	ENSCATG00000035735	SF3B1	99	100.000	Cercocebus_atys
ENSMMUG00000022430	SF3B1	99	99.923	ENSCLAG00000014767	SF3B1	99	100.000	Chinchilla_lanigera
ENSMMUG00000022430	SF3B1	99	100.000	ENSCSAG00000011505	SF3B1	99	100.000	Chlorocebus_sabaeus
ENSMMUG00000022430	SF3B1	75	98.214	ENSCHOG00000009860	SF3B1	75	98.182	Choloepus_hoffmanni
ENSMMUG00000022430	SF3B1	99	99.228	ENSCPBG00000021902	SF3B1	99	99.406	Chrysemys_picta_bellii
ENSMMUG00000022430	SF3B1	68	78.060	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSMMUG00000022430	SF3B1	99	80.061	ENSCSAVG00000002559	-	99	79.665	Ciona_savignyi
ENSMMUG00000022430	SF3B1	99	100.000	ENSCANG00000029415	SF3B1	99	100.000	Colobus_angolensis_palliatus
ENSMMUG00000022430	SF3B1	99	100.000	ENSCGRG00001016990	Sf3b1	99	100.000	Cricetulus_griseus_chok1gshd
ENSMMUG00000022430	SF3B1	99	100.000	ENSCGRG00000005301	Sf3b1	99	100.000	Cricetulus_griseus_crigri
ENSMMUG00000022430	SF3B1	99	90.023	ENSCSEG00000003860	sf3b1	99	89.946	Cynoglossus_semilaevis
ENSMMUG00000022430	SF3B1	95	93.631	ENSCVAG00000003680	sf3b1	99	93.631	Cyprinodon_variegatus
ENSMMUG00000022430	SF3B1	99	93.578	ENSDARG00000056138	sf3b1	99	93.502	Danio_rerio
ENSMMUG00000022430	SF3B1	99	99.923	ENSDNOG00000011754	SF3B1	99	99.923	Dasypus_novemcinctus
ENSMMUG00000022430	SF3B1	99	97.297	ENSDORG00000002399	Sf3b1	100	97.297	Dipodomys_ordii
ENSMMUG00000022430	SF3B1	99	76.758	FBgn0031266	Sf3b1	99	76.758	Drosophila_melanogaster
ENSMMUG00000022430	SF3B1	82	99.351	ENSETEG00000009188	SF3B1	100	99.351	Echinops_telfairi
ENSMMUG00000022430	SF3B1	99	87.270	ENSEBUG00000004325	sf3b1	100	90.191	Eptatretus_burgeri
ENSMMUG00000022430	SF3B1	99	99.923	ENSEASG00005020159	SF3B1	97	99.923	Equus_asinus_asinus
ENSMMUG00000022430	SF3B1	99	99.923	ENSECAG00000021657	SF3B1	97	99.923	Equus_caballus
ENSMMUG00000022430	SF3B1	86	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSMMUG00000022430	SF3B1	99	93.085	ENSELUG00000005977	sf3b1	97	92.933	Esox_lucius
ENSMMUG00000022430	SF3B1	99	100.000	ENSFCAG00000005038	SF3B1	99	100.000	Felis_catus
ENSMMUG00000022430	SF3B1	99	99.383	ENSFALG00000004281	SF3B1	99	99.383	Ficedula_albicollis
ENSMMUG00000022430	SF3B1	99	100.000	ENSFDAG00000017510	SF3B1	99	100.000	Fukomys_damarensis
ENSMMUG00000022430	SF3B1	99	92.890	ENSFHEG00000014333	sf3b1	99	92.890	Fundulus_heteroclitus
ENSMMUG00000022430	SF3B1	99	93.487	ENSGMOG00000006773	sf3b1	99	93.487	Gadus_morhua
ENSMMUG00000022430	SF3B1	99	99.382	ENSGALG00000008038	SF3B1	99	99.382	Gallus_gallus
ENSMMUG00000022430	SF3B1	98	93.441	ENSGAFG00000000704	sf3b1	99	93.441	Gambusia_affinis
ENSMMUG00000022430	SF3B1	99	93.630	ENSGACG00000008839	sf3b1	99	93.630	Gasterosteus_aculeatus
ENSMMUG00000022430	SF3B1	99	99.228	ENSGAGG00000017478	SF3B1	99	99.228	Gopherus_agassizii
ENSMMUG00000022430	SF3B1	99	93.170	ENSGGOG00000009264	SF3B1	99	94.231	Gorilla_gorilla
ENSMMUG00000022430	SF3B1	99	92.874	ENSHBUG00000007705	sf3b1	99	92.720	Haplochromis_burtoni
ENSMMUG00000022430	SF3B1	99	99.846	ENSHGLG00000008285	-	99	99.846	Heterocephalus_glaber_female
ENSMMUG00000022430	SF3B1	99	97.843	ENSHGLG00100005535	-	99	97.843	Heterocephalus_glaber_male
ENSMMUG00000022430	SF3B1	99	93.004	ENSHCOG00000016775	sf3b1	99	92.852	Hippocampus_comes
ENSMMUG00000022430	SF3B1	99	93.956	ENSIPUG00000013171	sf3b1	99	93.956	Ictalurus_punctatus
ENSMMUG00000022430	SF3B1	99	100.000	ENSSTOG00000011034	SF3B1	99	100.000	Ictidomys_tridecemlineatus
ENSMMUG00000022430	SF3B1	98	99.922	ENSJJAG00000010903	Sf3b1	99	99.922	Jaculus_jaculus
ENSMMUG00000022430	SF3B1	99	93.059	ENSKMAG00000004009	sf3b1	99	92.982	Kryptolebias_marmoratus
ENSMMUG00000022430	SF3B1	99	93.543	ENSLBEG00000022208	sf3b1	99	93.390	Labrus_bergylta
ENSMMUG00000022430	SF3B1	99	92.355	ENSLACG00000014832	SF3B1	99	92.490	Latimeria_chalumnae
ENSMMUG00000022430	SF3B1	99	94.882	ENSLOCG00000003899	sf3b1	99	94.729	Lepisosteus_oculatus
ENSMMUG00000022430	SF3B1	99	100.000	ENSLAFG00000001956	SF3B1	99	100.000	Loxodonta_africana
ENSMMUG00000022430	SF3B1	99	100.000	ENSMNEG00000042333	SF3B1	100	100.000	Macaca_nemestrina
ENSMMUG00000022430	SF3B1	95	93.478	ENSMLEG00000026141	SF3B1	99	94.027	Mandrillus_leucophaeus
ENSMMUG00000022430	SF3B1	99	93.573	ENSMAMG00000010241	sf3b1	99	93.573	Mastacembelus_armatus
ENSMMUG00000022430	SF3B1	99	92.808	ENSMZEG00005021254	sf3b1	99	92.655	Maylandia_zebra
ENSMMUG00000022430	SF3B1	99	98.688	ENSMGAG00000007017	SF3B1	99	98.688	Meleagris_gallopavo
ENSMMUG00000022430	SF3B1	99	95.311	ENSMAUG00000009071	Sf3b1	99	95.458	Mesocricetus_auratus
ENSMMUG00000022430	SF3B1	99	99.923	ENSMICG00000013879	SF3B1	100	99.083	Microcebus_murinus
ENSMMUG00000022430	SF3B1	99	95.598	ENSMOCG00000000455	Sf3b1	99	95.598	Microtus_ochrogaster
ENSMMUG00000022430	SF3B1	82	93.094	ENSMMOG00000000475	sf3b1	99	93.094	Mola_mola
ENSMMUG00000022430	SF3B1	99	99.305	ENSMODG00000012275	SF3B1	99	99.305	Monodelphis_domestica
ENSMMUG00000022430	SF3B1	99	93.497	ENSMALG00000017211	sf3b1	99	93.497	Monopterus_albus
ENSMMUG00000022430	SF3B1	99	100.000	MGP_CAROLIEiJ_G0014141	Sf3b1	99	100.000	Mus_caroli
ENSMMUG00000022430	SF3B1	99	100.000	ENSMUSG00000025982	Sf3b1	99	100.000	Mus_musculus
ENSMMUG00000022430	SF3B1	99	100.000	MGP_SPRETEiJ_G0014947	Sf3b1	99	100.000	Mus_spretus
ENSMMUG00000022430	SF3B1	99	100.000	ENSMPUG00000007799	SF3B1	99	100.000	Mustela_putorius_furo
ENSMMUG00000022430	SF3B1	99	98.764	ENSMLUG00000000840	SF3B1	99	98.764	Myotis_lucifugus
ENSMMUG00000022430	SF3B1	99	100.000	ENSNGAG00000021884	-	99	100.000	Nannospalax_galili
ENSMMUG00000022430	SF3B1	99	89.034	ENSNBRG00000015816	sf3b1	99	89.034	Neolamprologus_brichardi
ENSMMUG00000022430	SF3B1	99	100.000	ENSNLEG00000006861	SF3B1	99	100.000	Nomascus_leucogenys
ENSMMUG00000022430	SF3B1	69	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSMMUG00000022430	SF3B1	99	88.031	ENSOPRG00000008596	SF3B1	99	88.031	Ochotona_princeps
ENSMMUG00000022430	SF3B1	99	100.000	ENSODEG00000011153	-	99	100.000	Octodon_degus
ENSMMUG00000022430	SF3B1	99	92.808	ENSONIG00000013758	sf3b1	99	92.655	Oreochromis_niloticus
ENSMMUG00000022430	SF3B1	83	98.985	ENSOCUG00000012722	-	96	98.985	Oryctolagus_cuniculus
ENSMMUG00000022430	SF3B1	99	93.344	ENSORLG00000020219	sf3b1	99	93.344	Oryzias_latipes
ENSMMUG00000022430	SF3B1	99	93.344	ENSORLG00020001746	sf3b1	99	93.344	Oryzias_latipes_hni
ENSMMUG00000022430	SF3B1	63	90.854	ENSORLG00015001759	sf3b1	97	90.854	Oryzias_latipes_hsok
ENSMMUG00000022430	SF3B1	99	93.349	ENSOMEG00000019231	sf3b1	99	93.349	Oryzias_melastigma
ENSMMUG00000022430	SF3B1	99	99.923	ENSOARG00000015374	SF3B1	99	99.923	Ovis_aries
ENSMMUG00000022430	SF3B1	99	100.000	ENSPPAG00000035007	SF3B1	99	100.000	Pan_paniscus
ENSMMUG00000022430	SF3B1	99	100.000	ENSPPRG00000009090	SF3B1	99	100.000	Panthera_pardus
ENSMMUG00000022430	SF3B1	99	100.000	ENSPTIG00000021557	SF3B1	99	100.000	Panthera_tigris_altaica
ENSMMUG00000022430	SF3B1	99	91.455	ENSPTRG00000012771	SF3B1	99	91.455	Pan_troglodytes
ENSMMUG00000022430	SF3B1	99	100.000	ENSPANG00000013417	SF3B1	99	100.000	Papio_anubis
ENSMMUG00000022430	SF3B1	99	95.019	ENSPKIG00000000784	sf3b1	99	94.866	Paramormyrops_kingsleyae
ENSMMUG00000022430	SF3B1	99	97.692	ENSPSIG00000017222	SF3B1	99	97.917	Pelodiscus_sinensis
ENSMMUG00000022430	SF3B1	89	93.973	ENSPMGG00000004330	sf3b1	98	93.803	Periophthalmus_magnuspinnatus
ENSMMUG00000022430	SF3B1	99	100.000	ENSPEMG00000010699	Sf3b1	100	100.000	Peromyscus_maniculatus_bairdii
ENSMMUG00000022430	SF3B1	99	90.214	ENSPMAG00000001311	sf3b1	99	90.367	Petromyzon_marinus
ENSMMUG00000022430	SF3B1	99	99.228	ENSPCIG00000010642	SF3B1	99	99.228	Phascolarctos_cinereus
ENSMMUG00000022430	SF3B1	99	93.277	ENSPFOG00000000073	sf3b1	99	93.277	Poecilia_formosa
ENSMMUG00000022430	SF3B1	99	93.349	ENSPLAG00000002293	sf3b1	99	93.349	Poecilia_latipinna
ENSMMUG00000022430	SF3B1	99	93.349	ENSPMEG00000000446	sf3b1	97	93.349	Poecilia_mexicana
ENSMMUG00000022430	SF3B1	99	93.425	ENSPREG00000019652	sf3b1	99	93.425	Poecilia_reticulata
ENSMMUG00000022430	SF3B1	99	98.814	ENSPPYG00000013044	SF3B1	96	98.814	Pongo_abelii
ENSMMUG00000022430	SF3B1	99	99.846	ENSPCAG00000009292	SF3B1	99	99.846	Procavia_capensis
ENSMMUG00000022430	SF3B1	99	99.923	ENSPCOG00000024074	SF3B1	99	99.923	Propithecus_coquereli
ENSMMUG00000022430	SF3B1	99	100.000	ENSPVAG00000008302	SF3B1	99	100.000	Pteropus_vampyrus
ENSMMUG00000022430	SF3B1	99	92.808	ENSPNYG00000014939	sf3b1	99	92.655	Pundamilia_nyererei
ENSMMUG00000022430	SF3B1	99	93.956	ENSPNAG00000008288	sf3b1	99	93.956	Pygocentrus_nattereri
ENSMMUG00000022430	SF3B1	99	100.000	ENSRNOG00000013516	Sf3b1	99	100.000	Rattus_norvegicus
ENSMMUG00000022430	SF3B1	99	96.448	ENSRBIG00000026096	SF3B1	100	96.154	Rhinopithecus_bieti
ENSMMUG00000022430	SF3B1	99	100.000	ENSRROG00000031308	SF3B1	100	99.692	Rhinopithecus_roxellana
ENSMMUG00000022430	SF3B1	99	100.000	ENSSBOG00000020080	SF3B1	99	100.000	Saimiri_boliviensis_boliviensis
ENSMMUG00000022430	SF3B1	99	99.305	ENSSHAG00000017564	SF3B1	99	99.305	Sarcophilus_harrisii
ENSMMUG00000022430	SF3B1	99	94.572	ENSSFOG00015021535	sf3b1	99	94.725	Scleropages_formosus
ENSMMUG00000022430	SF3B1	99	92.906	ENSSMAG00000013977	sf3b1	98	92.754	Scophthalmus_maximus
ENSMMUG00000022430	SF3B1	99	93.344	ENSSDUG00000017422	sf3b1	99	93.344	Seriola_dumerili
ENSMMUG00000022430	SF3B1	99	93.267	ENSSLDG00000019495	sf3b1	99	93.267	Seriola_lalandi_dorsalis
ENSMMUG00000022430	SF3B1	76	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSMMUG00000022430	SF3B1	99	99.073	ENSSPUG00000000410	SF3B1	99	99.073	Sphenodon_punctatus
ENSMMUG00000022430	SF3B1	99	93.650	ENSSPAG00000010451	sf3b1	98	93.650	Stegastes_partitus
ENSMMUG00000022430	SF3B1	90	99.576	ENSSSCG00000016075	SF3B1	100	100.000	Sus_scrofa
ENSMMUG00000022430	SF3B1	99	99.305	ENSTGUG00000010553	SF3B1	99	99.305	Taeniopygia_guttata
ENSMMUG00000022430	SF3B1	99	93.420	ENSTRUG00000015534	sf3b1	99	93.267	Takifugu_rubripes
ENSMMUG00000022430	SF3B1	87	100.000	ENSTBEG00000008714	SF3B1	92	100.000	Tupaia_belangeri
ENSMMUG00000022430	SF3B1	91	94.185	ENSTTRG00000003414	SF3B1	92	94.185	Tursiops_truncatus
ENSMMUG00000022430	SF3B1	94	95.058	ENSUAMG00000018506	SF3B1	99	99.190	Ursus_americanus
ENSMMUG00000022430	SF3B1	99	100.000	ENSUMAG00000020945	SF3B1	99	100.000	Ursus_maritimus
ENSMMUG00000022430	SF3B1	99	91.815	ENSVPAG00000005798	SF3B1	99	91.815	Vicugna_pacos
ENSMMUG00000022430	SF3B1	99	100.000	ENSVVUG00000025948	SF3B1	94	100.000	Vulpes_vulpes
ENSMMUG00000022430	SF3B1	99	96.757	ENSXETG00000013339	sf3b1	99	96.757	Xenopus_tropicalis
ENSMMUG00000022430	SF3B1	99	89.838	ENSXCOG00000018086	sf3b1	99	89.724	Xiphophorus_couchianus
ENSMMUG00000022430	SF3B1	99	93.349	ENSXMAG00000007369	sf3b1	99	93.648	Xiphophorus_maculatus