EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000022469 (Gene tree)
Gene ID: 722347
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 24573 bases
Position: chr11:11004673-11029245
Accession: 722347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000029562	CSD	PF00313.22	6.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000031599	YBX3-201	1903	XM_015151066	ENSMMUP00000029562	325 (aa)	XP_015006552	F7AAR3

Gene Model

Click here to download ENSMMUG00000022469's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000022469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000022469	YBX3	90	46.622	ENSMMUG00000043132	-	89	44.027
ENSMMUG00000022469	YBX3	93	50.321	ENSMMUG00000013136	-	94	55.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000022469	YBX3	100	98.769	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSMMUG00000022469	YBX3	99	88.474	ENSAMEG00000009393	YBX3	91	89.538	Ailuropoda_melanoleuca
ENSMMUG00000022469	YBX3	88	64.685	ENSAPLG00000003147	YBX3	100	64.685	Anas_platyrhynchos
ENSMMUG00000022469	YBX3	100	97.538	ENSANAG00000024492	-	100	97.785	Aotus_nancymaae
ENSMMUG00000022469	YBX3	99	87.850	ENSBTAG00000009663	YBX3	85	82.769	Bos_taurus
ENSMMUG00000022469	YBX3	98	96.552	ENSCJAG00000021660	-	88	96.308	Callithrix_jacchus
ENSMMUG00000022469	YBX3	77	88.095	ENSCJAG00000033824	-	79	90.541	Callithrix_jacchus
ENSMMUG00000022469	YBX3	89	92.014	ENSCAFG00000013401	YBX3	84	92.884	Canis_familiaris
ENSMMUG00000022469	YBX3	98	88.715	ENSCAFG00020006412	YBX3	86	87.692	Canis_lupus_dingo
ENSMMUG00000022469	YBX3	99	87.850	ENSCHIG00000010863	YBX3	90	85.538	Capra_hircus
ENSMMUG00000022469	YBX3	88	94.425	ENSTSYG00000004204	-	88	94.425	Carlito_syrichta
ENSMMUG00000022469	YBX3	100	52.615	ENSTSYG00000035821	-	72	95.745	Carlito_syrichta
ENSMMUG00000022469	YBX3	88	86.411	ENSCAPG00000015039	YBX3	93	86.411	Cavia_aperea
ENSMMUG00000022469	YBX3	90	87.372	ENSCPOG00000011329	YBX3	86	87.372	Cavia_porcellus
ENSMMUG00000022469	YBX3	100	96.923	ENSCCAG00000016469	YBX3	87	96.923	Cebus_capucinus
ENSMMUG00000022469	YBX3	100	99.385	ENSCATG00000034411	YBX3	87	99.385	Cercocebus_atys
ENSMMUG00000022469	YBX3	88	86.760	ENSCLAG00000016030	YBX3	94	86.760	Chinchilla_lanigera
ENSMMUG00000022469	YBX3	100	99.385	ENSCSAG00000008744	YBX3	87	99.385	Chlorocebus_sabaeus
ENSMMUG00000022469	YBX3	89	79.038	ENSCPBG00000014147	YBX3	81	78.498	Chrysemys_picta_bellii
ENSMMUG00000022469	YBX3	97	98.413	ENSCANG00000036801	YBX3	100	98.413	Colobus_angolensis_palliatus
ENSMMUG00000022469	YBX3	98	89.308	ENSCGRG00001016148	Ybx3	88	86.462	Cricetulus_griseus_chok1gshd
ENSMMUG00000022469	YBX3	88	90.411	ENSCGRG00000004563	Ybx3	98	89.041	Cricetulus_griseus_crigri
ENSMMUG00000022469	YBX3	88	90.877	ENSDORG00000009103	Ybx3	81	90.244	Dipodomys_ordii
ENSMMUG00000022469	YBX3	87	84.912	ENSETEG00000002557	YBX3	99	84.155	Echinops_telfairi
ENSMMUG00000022469	YBX3	99	83.489	ENSEASG00005014726	YBX3	87	84.308	Equus_asinus_asinus
ENSMMUG00000022469	YBX3	99	88.785	ENSECAG00000013777	YBX3	87	88.615	Equus_caballus
ENSMMUG00000022469	YBX3	87	91.549	ENSEEUG00000010415	YBX3	100	91.549	Erinaceus_europaeus
ENSMMUG00000022469	YBX3	99	92.212	ENSFCAG00000027748	YBX3	87	93.231	Felis_catus
ENSMMUG00000022469	YBX3	88	65.625	ENSFALG00000003661	YBX3	100	61.806	Ficedula_albicollis
ENSMMUG00000022469	YBX3	88	85.017	ENSFDAG00000021192	YBX3	92	83.972	Fukomys_damarensis
ENSMMUG00000022469	YBX3	89	59.655	ENSGALG00000031890	YBX3	70	97.849	Gallus_gallus
ENSMMUG00000022469	YBX3	89	79.381	ENSGAGG00000017780	YBX3	81	78.840	Gopherus_agassizii
ENSMMUG00000022469	YBX3	100	98.769	ENSGGOG00000001352	YBX3	87	98.769	Gorilla_gorilla
ENSMMUG00000022469	YBX3	84	78.909	ENSHGLG00000015495	-	88	74.086	Heterocephalus_glaber_female
ENSMMUG00000022469	YBX3	92	74.917	ENSHGLG00000014798	-	86	76.094	Heterocephalus_glaber_female
ENSMMUG00000022469	YBX3	62	97.727	ENSHGLG00100003589	YBX3	87	63.415	Heterocephalus_glaber_male
ENSMMUG00000022469	YBX3	98	83.386	ENSSTOG00000032577	-	89	84.923	Ictidomys_tridecemlineatus
ENSMMUG00000022469	YBX3	88	86.063	ENSSTOG00000002108	-	88	82.131	Ictidomys_tridecemlineatus
ENSMMUG00000022469	YBX3	91	68.687	ENSJJAG00000014239	Ybx3	96	85.227	Jaculus_jaculus
ENSMMUG00000022469	YBX3	91	94.237	ENSLAFG00000017247	YBX3	95	87.227	Loxodonta_africana
ENSMMUG00000022469	YBX3	100	100.000	ENSMFAG00000039369	YBX3	87	100.000	Macaca_fascicularis
ENSMMUG00000022469	YBX3	100	99.385	ENSMNEG00000045109	YBX3	87	99.385	Macaca_nemestrina
ENSMMUG00000022469	YBX3	88	98.955	ENSMLEG00000033618	YBX3	81	98.606	Mandrillus_leucophaeus
ENSMMUG00000022469	YBX3	88	66.551	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSMMUG00000022469	YBX3	100	88.308	ENSMAUG00000012185	Ybx3	99	85.846	Mesocricetus_auratus
ENSMMUG00000022469	YBX3	84	80.769	ENSMICG00000031459	-	88	62.154	Microcebus_murinus
ENSMMUG00000022469	YBX3	90	94.198	ENSMICG00000038002	-	87	92.000	Microcebus_murinus
ENSMMUG00000022469	YBX3	96	89.068	ENSMOCG00000016291	Ybx3	96	90.847	Microtus_ochrogaster
ENSMMUG00000022469	YBX3	88	83.275	ENSMODG00000018248	YBX3	91	83.681	Monodelphis_domestica
ENSMMUG00000022469	YBX3	98	88.365	MGP_CAROLIEiJ_G0028947	Ybx3	88	85.538	Mus_caroli
ENSMMUG00000022469	YBX3	98	88.365	ENSMUSG00000030189	Ybx3	88	85.538	Mus_musculus
ENSMMUG00000022469	YBX3	98	88.994	MGP_PahariEiJ_G0022709	Ybx3	88	86.154	Mus_pahari
ENSMMUG00000022469	YBX3	98	88.679	MGP_SPRETEiJ_G0029994	Ybx3	88	85.846	Mus_spretus
ENSMMUG00000022469	YBX3	99	77.508	ENSMPUG00000011810	YBX3	87	76.877	Mustela_putorius_furo
ENSMMUG00000022469	YBX3	82	92.565	ENSMLUG00000007476	YBX3	100	90.706	Myotis_lucifugus
ENSMMUG00000022469	YBX3	91	85.522	ENSNGAG00000000710	Ybx3	91	61.279	Nannospalax_galili
ENSMMUG00000022469	YBX3	100	95.077	ENSNLEG00000034844	YBX3	92	95.077	Nomascus_leucogenys
ENSMMUG00000022469	YBX3	60	68.599	ENSMEUG00000002507	-	81	76.879	Notamacropus_eugenii
ENSMMUG00000022469	YBX3	94	80.592	ENSODEG00000017957	YBX3	94	80.997	Octodon_degus
ENSMMUG00000022469	YBX3	91	87.119	ENSOCUG00000001889	YBX3	85	86.780	Oryctolagus_cuniculus
ENSMMUG00000022469	YBX3	98	89.846	ENSOGAG00000013245	YBX3	88	88.855	Otolemur_garnettii
ENSMMUG00000022469	YBX3	91	77.926	ENSOARG00000020919	YBX3	99	82.155	Ovis_aries
ENSMMUG00000022469	YBX3	96	98.071	ENSPPAG00000039068	YBX3	87	98.071	Pan_paniscus
ENSMMUG00000022469	YBX3	99	92.212	ENSPPRG00000005859	YBX3	87	93.231	Panthera_pardus
ENSMMUG00000022469	YBX3	88	92.632	ENSPTIG00000005322	YBX3	81	91.986	Panthera_tigris_altaica
ENSMMUG00000022469	YBX3	100	98.769	ENSPTRG00000004681	YBX3	87	98.769	Pan_troglodytes
ENSMMUG00000022469	YBX3	100	99.385	ENSPANG00000010280	YBX3	87	99.385	Papio_anubis
ENSMMUG00000022469	YBX3	65	99.038	ENSPSIG00000009247	YBX3	95	100.000	Pelodiscus_sinensis
ENSMMUG00000022469	YBX3	71	91.525	ENSPEMG00000010391	-	85	65.763	Peromyscus_maniculatus_bairdii
ENSMMUG00000022469	YBX3	99	88.272	ENSPEMG00000012132	-	100	86.728	Peromyscus_maniculatus_bairdii
ENSMMUG00000022469	YBX3	80	81.154	ENSPCIG00000029949	YBX3	100	79.231	Phascolarctos_cinereus
ENSMMUG00000022469	YBX3	100	98.462	ENSPPYG00000004279	YBX3	88	98.462	Pongo_abelii
ENSMMUG00000022469	YBX3	66	94.884	ENSPCAG00000001397	YBX3	83	92.083	Procavia_capensis
ENSMMUG00000022469	YBX3	56	91.803	ENSPCOG00000011663	YBX3	82	85.308	Propithecus_coquereli
ENSMMUG00000022469	YBX3	98	77.987	ENSPVAG00000006740	YBX3	64	93.333	Pteropus_vampyrus
ENSMMUG00000022469	YBX3	98	89.623	ENSRNOG00000005480	Ybx3	88	86.769	Rattus_norvegicus
ENSMMUG00000022469	YBX3	100	98.462	ENSRBIG00000039208	YBX3	88	98.462	Rhinopithecus_bieti
ENSMMUG00000022469	YBX3	100	98.769	ENSRROG00000029638	YBX3	88	98.769	Rhinopithecus_roxellana
ENSMMUG00000022469	YBX3	98	90.881	ENSSBOG00000030573	YBX3	87	95.254	Saimiri_boliviensis_boliviensis
ENSMMUG00000022469	YBX3	88	80.069	ENSSHAG00000003262	YBX3	98	80.069	Sarcophilus_harrisii
ENSMMUG00000022469	YBX3	99	89.164	ENSSSCG00000000633	YBX3	86	91.131	Sus_scrofa
ENSMMUG00000022469	YBX3	99	89.164	ENSTBEG00000012570	YBX3	81	93.857	Tupaia_belangeri
ENSMMUG00000022469	YBX3	81	84.211	ENSTTRG00000008045	YBX3	100	84.211	Tursiops_truncatus
ENSMMUG00000022469	YBX3	86	88.489	ENSUAMG00000016662	YBX3	100	88.129	Ursus_americanus
ENSMMUG00000022469	YBX3	88	91.228	ENSUMAG00000016118	YBX3	94	91.289	Ursus_maritimus
ENSMMUG00000022469	YBX3	87	71.831	ENSVPAG00000000876	YBX3	100	71.831	Vicugna_pacos
ENSMMUG00000022469	YBX3	86	88.849	ENSVVUG00000004956	YBX3	100	88.849	Vulpes_vulpes
ENSMMUG00000022469	YBX3	61	92.222	ENSXETG00000016239	ybx3	92	53.000	Xenopus_tropicalis