EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000022606 (Gene tree)
Gene ID: 717428
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 14518 bases
Position: chr14:9690233-9704750
Accession: 717428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000043993	KH_1	PF00013.29	2e-07	1	1
ENSMMUP00000046353	KH_1	PF00013.29	2.2e-07	1	1
ENSMMUP00000029763	KH_1	PF00013.29	3.3e-07	1	1
ENSMMUP00000029762	KH_1	PF00013.29	3.6e-07	1	1
ENSMMUP00000037470	KH_1	PF00013.29	4.1e-07	1	1
ENSMMUP00000029764	KH_1	PF00013.29	4.3e-07	1	1
ENSMMUP00000041611	KH_1	PF00013.29	4.6e-07	1	1
ENSMMUP00000046353	zf-CCHC	PF00098.23	0.00017	1	1
ENSMMUP00000043993	zf-CCHC	PF00098.23	0.00017	1	1
ENSMMUP00000029763	zf-CCHC	PF00098.23	0.0002	1	1
ENSMMUP00000029762	zf-CCHC	PF00098.23	0.00023	1	1
ENSMMUP00000037470	zf-CCHC	PF00098.23	0.00028	1	1
ENSMMUP00000029764	zf-CCHC	PF00098.23	0.00029	1	1
ENSMMUP00000041611	zf-CCHC	PF00098.23	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000067609	SF1-207	1233	-	ENSMMUP00000043993	410 (aa)	-	A0A1D5Q7H7
ENSMMUT00000066532	SF1-203	1992	-	ENSMMUP00000041611	663 (aa)	-	A0A1D5Q0P9
ENSMMUT00000031812	SF1-205	1608	-	ENSMMUP00000029763	535 (aa)	-	F6Z704
ENSMMUT00000044453	SF1-204	3662	XM_015113853	ENSMMUP00000037470	630 (aa)	XP_014969339	F6SV41
ENSMMUT00000031811	SF1-201	3188	XM_015113857	ENSMMUP00000029762	548 (aa)	XP_014969343	H9EPF6
ENSMMUT00000053372	SF1-206	1293	-	ENSMMUP00000046353	430 (aa)	-	A0A1D5QE84
ENSMMUT00000031813	SF1-202	1917	XM_015113855	ENSMMUP00000029764	638 (aa)	XP_014969341	F6Z6Z8

Gene Model

Click here to download ENSMMUG00000022606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000022606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000022606	SF1	90	81.794	ENSAPOG00000012341	sf1	54	81.963	Acanthochromis_polyacanthus
ENSMMUG00000022606	SF1	99	99.263	ENSAMEG00000017828	SF1	91	94.728	Ailuropoda_melanoleuca
ENSMMUG00000022606	SF1	89	83.651	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSMMUG00000022606	SF1	90	81.266	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSMMUG00000022606	SF1	90	81.266	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSMMUG00000022606	SF1	90	81.579	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSMMUG00000022606	SF1	99	88.642	ENSANAG00000022607	-	99	87.562	Aotus_nancymaae
ENSMMUG00000022606	SF1	100	99.843	ENSANAG00000026664	-	100	99.843	Aotus_nancymaae
ENSMMUG00000022606	SF1	89	84.282	ENSACLG00000007633	sf1	60	80.856	Astatotilapia_calliptera
ENSMMUG00000022606	SF1	90	86.096	ENSAMXG00000003630	sf1	50	82.723	Astyanax_mexicanus
ENSMMUG00000022606	SF1	100	100.000	ENSBTAG00000001035	SF1	99	100.000	Bos_taurus
ENSMMUG00000022606	SF1	100	100.000	ENSCJAG00000002780	SF1	100	100.000	Callithrix_jacchus
ENSMMUG00000022606	SF1	100	100.000	ENSCAFG00000014239	SF1	100	100.000	Canis_familiaris
ENSMMUG00000022606	SF1	100	100.000	ENSCAFG00020014381	SF1	100	100.000	Canis_lupus_dingo
ENSMMUG00000022606	SF1	100	100.000	ENSCHIG00000025867	SF1	100	100.000	Capra_hircus
ENSMMUG00000022606	SF1	74	98.925	ENSTSYG00000033618	SF1	89	98.925	Carlito_syrichta
ENSMMUG00000022606	SF1	99	99.012	ENSCAPG00000010762	SF1	100	78.889	Cavia_aperea
ENSMMUG00000022606	SF1	99	99.017	ENSCPOG00000012290	SF1	100	99.628	Cavia_porcellus
ENSMMUG00000022606	SF1	99	86.732	ENSCCAG00000023781	-	94	85.159	Cebus_capucinus
ENSMMUG00000022606	SF1	100	100.000	ENSCCAG00000037881	SF1	100	100.000	Cebus_capucinus
ENSMMUG00000022606	SF1	100	100.000	ENSCATG00000011564	SF1	100	100.000	Cercocebus_atys
ENSMMUG00000022606	SF1	100	100.000	ENSCSAG00000007258	SF1	100	100.000	Chlorocebus_sabaeus
ENSMMUG00000022606	SF1	94	92.765	ENSCHOG00000006008	SF1	88	87.742	Choloepus_hoffmanni
ENSMMUG00000022606	SF1	99	90.394	ENSCPBG00000023763	SF1	66	85.300	Chrysemys_picta_bellii
ENSMMUG00000022606	SF1	89	59.946	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSMMUG00000022606	SF1	96	53.372	ENSCSAVG00000009055	-	72	63.787	Ciona_savignyi
ENSMMUG00000022606	SF1	100	100.000	ENSCANG00000042201	SF1	100	100.000	Colobus_angolensis_palliatus
ENSMMUG00000022606	SF1	100	99.524	ENSCGRG00001003677	Sf1	99	99.524	Cricetulus_griseus_chok1gshd
ENSMMUG00000022606	SF1	99	98.765	ENSCGRG00000001708	Sf1	99	99.255	Cricetulus_griseus_crigri
ENSMMUG00000022606	SF1	98	77.724	ENSCSEG00000014375	sf1	58	75.943	Cynoglossus_semilaevis
ENSMMUG00000022606	SF1	90	84.324	ENSCVAG00000001670	sf1	63	79.167	Cyprinodon_variegatus
ENSMMUG00000022606	SF1	95	80.964	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSMMUG00000022606	SF1	100	99.453	ENSDNOG00000001282	SF1	100	99.453	Dasypus_novemcinctus
ENSMMUG00000022606	SF1	100	100.000	ENSDORG00000016334	Sf1	100	99.843	Dipodomys_ordii
ENSMMUG00000022606	SF1	99	89.136	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSMMUG00000022606	SF1	100	99.635	ENSEASG00005018272	SF1	100	99.635	Equus_asinus_asinus
ENSMMUG00000022606	SF1	100	99.818	ENSECAG00000024544	SF1	100	99.818	Equus_caballus
ENSMMUG00000022606	SF1	88	98.619	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSMMUG00000022606	SF1	90	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSMMUG00000022606	SF1	100	100.000	ENSFCAG00000012231	SF1	100	100.000	Felis_catus
ENSMMUG00000022606	SF1	99	99.506	ENSFDAG00000009833	SF1	99	92.006	Fukomys_damarensis
ENSMMUG00000022606	SF1	90	81.530	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSMMUG00000022606	SF1	78	87.613	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSMMUG00000022606	SF1	90	84.182	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSMMUG00000022606	SF1	92	80.052	ENSGACG00000000826	sf1	68	76.722	Gasterosteus_aculeatus
ENSMMUG00000022606	SF1	99	89.630	ENSGAGG00000021691	SF1	72	85.300	Gopherus_agassizii
ENSMMUG00000022606	SF1	90	82.632	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSMMUG00000022606	SF1	100	99.843	ENSHGLG00000009541	SF1	100	99.843	Heterocephalus_glaber_female
ENSMMUG00000022606	SF1	99	86.288	ENSHGLG00100008255	-	94	86.345	Heterocephalus_glaber_male
ENSMMUG00000022606	SF1	99	99.506	ENSHGLG00100013879	-	93	96.579	Heterocephalus_glaber_male
ENSMMUG00000022606	SF1	93	88.189	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSMMUG00000022606	SF1	92	81.088	ENSHCOG00000011388	sf1	55	80.106	Hippocampus_comes
ENSMMUG00000022606	SF1	99	100.000	ENSSTOG00000009790	-	100	100.000	Ictidomys_tridecemlineatus
ENSMMUG00000022606	SF1	99	87.192	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSMMUG00000022606	SF1	100	99.841	ENSJJAG00000011788	Sf1	100	99.687	Jaculus_jaculus
ENSMMUG00000022606	SF1	91	83.290	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSMMUG00000022606	SF1	91	82.199	ENSLBEG00000019836	sf1	64	78.230	Labrus_bergylta
ENSMMUG00000022606	SF1	99	78.450	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSMMUG00000022606	SF1	91	84.881	ENSLOCG00000002130	sf1	57	84.946	Lepisosteus_oculatus
ENSMMUG00000022606	SF1	99	99.017	ENSLAFG00000007201	SF1	100	95.659	Loxodonta_africana
ENSMMUG00000022606	SF1	100	100.000	ENSMFAG00000033122	SF1	100	100.000	Macaca_fascicularis
ENSMMUG00000022606	SF1	100	100.000	ENSMNEG00000037901	SF1	99	100.000	Macaca_nemestrina
ENSMMUG00000022606	SF1	99	100.000	ENSMLEG00000040706	SF1	96	99.748	Mandrillus_leucophaeus
ENSMMUG00000022606	SF1	90	82.322	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSMMUG00000022606	SF1	90	82.368	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSMMUG00000022606	SF1	100	99.216	ENSMAUG00000014064	Sf1	100	99.216	Mesocricetus_auratus
ENSMMUG00000022606	SF1	100	99.841	ENSMICG00000001202	SF1	100	99.687	Microcebus_murinus
ENSMMUG00000022606	SF1	100	99.216	ENSMOCG00000022038	Sf1	100	99.216	Microtus_ochrogaster
ENSMMUG00000022606	SF1	90	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSMMUG00000022606	SF1	99	98.034	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSMMUG00000022606	SF1	90	83.243	ENSMALG00000020521	sf1	68	76.611	Monopterus_albus
ENSMMUG00000022606	SF1	100	99.453	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSMMUG00000022606	SF1	100	99.453	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSMMUG00000022606	SF1	100	99.453	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSMMUG00000022606	SF1	100	99.453	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSMMUG00000022606	SF1	100	99.841	ENSMPUG00000012684	SF1	99	99.841	Mustela_putorius_furo
ENSMMUG00000022606	SF1	100	99.683	ENSMLUG00000015217	-	99	99.683	Myotis_lucifugus
ENSMMUG00000022606	SF1	99	95.086	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSMMUG00000022606	SF1	100	99.687	ENSNGAG00000005550	Sf1	100	99.687	Nannospalax_galili
ENSMMUG00000022606	SF1	89	84.282	ENSNBRG00000017606	sf1	61	79.137	Neolamprologus_brichardi
ENSMMUG00000022606	SF1	100	99.843	ENSNLEG00000005236	-	100	99.843	Nomascus_leucogenys
ENSMMUG00000022606	SF1	97	98.493	ENSMEUG00000013424	SF1	100	98.493	Notamacropus_eugenii
ENSMMUG00000022606	SF1	90	99.394	ENSOPRG00000005008	SF1	100	99.394	Ochotona_princeps
ENSMMUG00000022606	SF1	99	96.806	ENSODEG00000006102	-	100	87.827	Octodon_degus
ENSMMUG00000022606	SF1	90	82.632	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSMMUG00000022606	SF1	82	86.765	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSMMUG00000022606	SF1	99	99.841	ENSOCUG00000026486	SF1	100	99.841	Oryctolagus_cuniculus
ENSMMUG00000022606	SF1	93	80.307	ENSORLG00000011853	sf1	57	77.916	Oryzias_latipes
ENSMMUG00000022606	SF1	93	80.307	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSMMUG00000022606	SF1	91	80.105	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSMMUG00000022606	SF1	91	81.414	ENSOMEG00000005210	sf1	60	77.698	Oryzias_melastigma
ENSMMUG00000022606	SF1	100	99.843	ENSOGAG00000016196	SF1	100	99.843	Otolemur_garnettii
ENSMMUG00000022606	SF1	99	99.509	ENSOARG00000009166	SF1	97	95.298	Ovis_aries
ENSMMUG00000022606	SF1	100	97.590	ENSPPAG00000002799	-	100	100.000	Pan_paniscus
ENSMMUG00000022606	SF1	99	99.507	ENSPPRG00000013566	SF1	100	100.000	Panthera_pardus
ENSMMUG00000022606	SF1	99	99.509	ENSPTIG00000016141	SF1	79	100.000	Panthera_tigris_altaica
ENSMMUG00000022606	SF1	100	100.000	ENSPTRG00000003846	SF1	100	100.000	Pan_troglodytes
ENSMMUG00000022606	SF1	100	100.000	ENSPANG00000020754	SF1	100	100.000	Papio_anubis
ENSMMUG00000022606	SF1	81	78.824	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSMMUG00000022606	SF1	73	87.417	ENSPSIG00000003610	SF1	97	75.490	Pelodiscus_sinensis
ENSMMUG00000022606	SF1	100	99.373	ENSPEMG00000010463	Sf1	100	99.373	Peromyscus_maniculatus_bairdii
ENSMMUG00000022606	SF1	82	72.321	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSMMUG00000022606	SF1	100	98.889	ENSPCIG00000018173	SF1	100	98.276	Phascolarctos_cinereus
ENSMMUG00000022606	SF1	90	85.405	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSMMUG00000022606	SF1	90	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSMMUG00000022606	SF1	90	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSMMUG00000022606	SF1	90	83.333	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSMMUG00000022606	SF1	100	99.843	ENSPPYG00000003098	-	100	99.843	Pongo_abelii
ENSMMUG00000022606	SF1	99	98.768	ENSPCAG00000013631	SF1	85	94.386	Procavia_capensis
ENSMMUG00000022606	SF1	100	99.843	ENSPCOG00000027546	SF1	100	99.843	Propithecus_coquereli
ENSMMUG00000022606	SF1	99	98.768	ENSPVAG00000016938	SF1	81	99.442	Pteropus_vampyrus
ENSMMUG00000022606	SF1	90	82.368	ENSPNYG00000004673	sf1	61	77.262	Pundamilia_nyererei
ENSMMUG00000022606	SF1	90	85.867	ENSPNAG00000013072	sf1	60	79.426	Pygocentrus_nattereri
ENSMMUG00000022606	SF1	100	99.365	ENSRNOG00000021085	Sf1	99	99.365	Rattus_norvegicus
ENSMMUG00000022606	SF1	99	99.509	ENSRBIG00000042818	SF1	100	95.925	Rhinopithecus_bieti
ENSMMUG00000022606	SF1	99	99.507	ENSRROG00000045655	SF1	100	100.000	Rhinopithecus_roxellana
ENSMMUG00000022606	SF1	89	38.575	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSMMUG00000022606	SF1	99	81.773	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSMMUG00000022606	SF1	97	94.763	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSMMUG00000022606	SF1	96	80.451	ENSSFOG00015021978	sf1	58	78.571	Scleropages_formosus
ENSMMUG00000022606	SF1	99	76.415	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSMMUG00000022606	SF1	90	80.526	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSMMUG00000022606	SF1	90	80.526	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSMMUG00000022606	SF1	99	94.568	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSMMUG00000022606	SF1	87	92.717	ENSSPUG00000012907	SF1	86	81.382	Sphenodon_punctatus
ENSMMUG00000022606	SF1	90	81.530	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSMMUG00000022606	SF1	100	99.841	ENSSSCG00000013021	SF1	100	99.818	Sus_scrofa
ENSMMUG00000022606	SF1	95	71.285	ENSTNIG00000004820	sf1	80	69.789	Tetraodon_nigroviridis
ENSMMUG00000022606	SF1	99	91.605	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSMMUG00000022606	SF1	98	95.717	ENSTTRG00000008857	SF1	100	95.717	Tursiops_truncatus
ENSMMUG00000022606	SF1	83	97.137	ENSUAMG00000011977	SF1	100	97.137	Ursus_americanus
ENSMMUG00000022606	SF1	99	99.509	ENSUMAG00000007268	SF1	90	98.864	Ursus_maritimus
ENSMMUG00000022606	SF1	75	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSMMUG00000022606	SF1	100	100.000	ENSVVUG00000028585	SF1	100	100.000	Vulpes_vulpes
ENSMMUG00000022606	SF1	99	81.146	ENSXETG00000008434	sf1	66	83.805	Xenopus_tropicalis
ENSMMUG00000022606	SF1	89	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSMMUG00000022606	SF1	90	83.113	ENSXMAG00000007822	sf1	60	80.446	Xiphophorus_maculatus