Description
Ensembl ID
ENSMMUG00000023286 (Gene tree)
Gene ID
720288
Gene Symbol
UPF1
Alias
HUPF1|KIAA0221|NORF1|RENT1|pNORF1|smg-2
Full Name
UPF1%2C RNA helicase and ATPase
Gene Type
protein_coding
Species
Macaca_mulatta
Status
putative
Strand
Plus strand
Length
38713 bases
Position
chr19:18914640-18953352
Accession
720288
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSMMUP00000043788UPF1_Zn_bindPF09416.101.1e-7411
ENSMMUP00000030651UPF1_Zn_bindPF09416.101.1e-7411
ENSMMUP00000043788ResIIIPF04851.153.8e-0511
ENSMMUP00000030651ResIIIPF04851.153.9e-0511
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSMMUT00000032759UPF1-2015393XM_015123356ENSMMUP000000306511129 (aa)XP_014978842F7FFJ3
ENSMMUT00000067563UPF1-2023375-ENSMMUP000000437881124 (aa)-A0A1D5Q6X2
Pathways
Pathway ID
Pathway Name
Source
mcc03013RNA transportKEGG
mcc03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSMMUG00000023286UPF1100100.000ENSG00000005007UPF1100100.000Homo_sapiens
ENSMMUG00000023286UPF110092.014ENSAPOG00000010916-10092.014Acanthochromis_polyacanthus
ENSMMUG00000023286UPF110090.708ENSAPOG00000023773upf110090.798Acanthochromis_polyacanthus
ENSMMUG00000023286UPF110098.493ENSAMEG00000011474UPF110098.493Ailuropoda_melanoleuca
ENSMMUG00000023286UPF19294.015ENSACIG00000010985-10094.112Amphilophus_citrinellus
ENSMMUG00000023286UPF110090.539ENSACIG00000019949upf110090.885Amphilophus_citrinellus
ENSMMUG00000023286UPF110090.222ENSAOCG00000018519upf110090.798Amphiprion_ocellaris
ENSMMUG00000023286UPF110092.103ENSAOCG00000006352-10092.103Amphiprion_ocellaris
ENSMMUG00000023286UPF110092.103ENSAPEG00000006292-10092.103Amphiprion_percula
ENSMMUG00000023286UPF110090.222ENSAPEG00000016344upf110090.798Amphiprion_percula
ENSMMUG00000023286UPF110092.103ENSATEG00000016606-10092.103Anabas_testudineus
ENSMMUG00000023286UPF110089.414ENSATEG00000017867upf110090.201Anabas_testudineus
ENSMMUG00000023286UPF19498.192ENSAPLG00000009175UPF19998.192Anas_platyrhynchos
ENSMMUG00000023286UPF19696.858ENSANAG00000024107UPF19896.858Aotus_nancymaae
ENSMMUG00000023286UPF110090.274ENSACLG00000007181upf110090.619Astatotilapia_calliptera
ENSMMUG00000023286UPF110092.007ENSACLG00000022630-10091.918Astatotilapia_calliptera
ENSMMUG00000023286UPF110092.635ENSAMXG00000042187upf110093.079Astyanax_mexicanus
ENSMMUG00000023286UPF110099.204ENSBTAG00000020922UPF110099.204Bos_taurus
ENSMMUG00000023286UPF18950.391WBGene00004880smg-29947.814Caenorhabditis_elegans
ENSMMUG00000023286UPF1100100.000ENSCJAG00000019627UPF1100100.000Callithrix_jacchus
ENSMMUG00000023286UPF110099.646ENSCAFG00000014578UPF110099.646Canis_familiaris
ENSMMUG00000023286UPF110098.673ENSCAFG00020012347UPF110098.673Canis_lupus_dingo
ENSMMUG00000023286UPF110098.760ENSCHIG00000011018UPF110098.760Capra_hircus
ENSMMUG00000023286UPF19698.327ENSTSYG00000008877UPF19998.327Carlito_syrichta
ENSMMUG00000023286UPF19498.764ENSCAPG00000005758UPF19598.764Cavia_aperea
ENSMMUG00000023286UPF110096.892ENSCPOG00000025463UPF110096.892Cavia_porcellus
ENSMMUG00000023286UPF110099.733ENSCCAG00000032175UPF110099.733Cebus_capucinus
ENSMMUG00000023286UPF19598.411ENSCATG00000040306UPF19898.411Cercocebus_atys
ENSMMUG00000023286UPF19698.519ENSCLAG00000004037UPF110099.620Chinchilla_lanigera
ENSMMUG00000023286UPF110098.937ENSCSAG00000005276UPF110098.937Chlorocebus_sabaeus
ENSMMUG00000023286UPF110096.188ENSCPBG00000012513UPF110096.188Chrysemys_picta_bellii
ENSMMUG00000023286UPF17877.702ENSCING00000021399-9977.702Ciona_intestinalis
ENSMMUG00000023286UPF19971.592ENSCSAVG00000006533-9971.592Ciona_savignyi
ENSMMUG00000023286UPF19599.252ENSCANG00000029819UPF19999.252Colobus_angolensis_palliatus
ENSMMUG00000023286UPF110097.954ENSCGRG00001021067Upf110097.954Cricetulus_griseus_chok1gshd
ENSMMUG00000023286UPF19598.129ENSCGRG00000013480Upf19998.129Cricetulus_griseus_crigri
ENSMMUG00000023286UPF110085.714ENSCSEG00000017239upf110085.803Cynoglossus_semilaevis
ENSMMUG00000023286UPF110092.007ENSCSEG00000016159-10091.918Cynoglossus_semilaevis
ENSMMUG00000023286UPF110091.925ENSCVAG00000010561upf110091.837Cyprinodon_variegatus
ENSMMUG00000023286UPF110092.458ENSDARG00000016302upf110092.902Danio_rerio
ENSMMUG00000023286UPF19595.884ENSDORG00000009984Upf19695.884Dipodomys_ordii
ENSMMUG00000023286UPF18570.504FBgn0030354Upf18467.048Drosophila_melanogaster
ENSMMUG00000023286UPF15684.076ENSEBUG00000010069upf19684.591Eptatretus_burgeri
ENSMMUG00000023286UPF110098.230ENSEASG00005006549UPF110098.230Equus_asinus_asinus
ENSMMUG00000023286UPF110098.230ENSECAG00000010639UPF110098.230Equus_caballus
ENSMMUG00000023286UPF110089.929ENSELUG00000020917upf110090.194Esox_lucius
ENSMMUG00000023286UPF110091.350ENSELUG00000012916-10091.270Esox_lucius
ENSMMUG00000023286UPF110099.558ENSFCAG00000009757UPF110099.558Felis_catus
ENSMMUG00000023286UPF19695.853ENSFALG00000009312UPF19995.853Ficedula_albicollis
ENSMMUG00000023286UPF19797.426ENSFDAG00000014816UPF110099.525Fukomys_damarensis
ENSMMUG00000023286UPF110087.852ENSFHEG00000006428upf110087.852Fundulus_heteroclitus
ENSMMUG00000023286UPF18593.648ENSFHEG00000016276-9693.829Fundulus_heteroclitus
ENSMMUG00000023286UPF110091.659ENSGMOG00000007541upf110092.103Gadus_morhua
ENSMMUG00000023286UPF110096.726ENSGALG00000003220UPF110096.726Gallus_gallus
ENSMMUG00000023286UPF16293.901ENSGAFG00000015443-8891.621Gambusia_affinis
ENSMMUG00000023286UPF110091.741ENSGAFG00000004831upf110091.652Gambusia_affinis
ENSMMUG00000023286UPF110096.628ENSGAGG00000022217UPF110096.628Gopherus_agassizii
ENSMMUG00000023286UPF19498.955ENSGGOG00000002608UPF19998.955Gorilla_gorilla
ENSMMUG00000023286UPF187100.000ENSHBUG00000008939upf195100.000Haplochromis_burtoni
ENSMMUG00000023286UPF19086.207ENSHBUG00000014694upf110086.207Haplochromis_burtoni
ENSMMUG00000023286UPF110099.114ENSHGLG00000010900UPF110099.114Heterocephalus_glaber_female
ENSMMUG00000023286UPF19695.845ENSHGLG00100005904UPF19995.845Heterocephalus_glaber_male
ENSMMUG00000023286UPF110091.030ENSHCOG00000008918upf110092.823Hippocampus_comes
ENSMMUG00000023286UPF110093.079ENSIPUG00000005108UPF110093.434Ictalurus_punctatus
ENSMMUG00000023286UPF110099.555ENSSTOG00000009196UPF110099.555Ictidomys_tridecemlineatus
ENSMMUG00000023286UPF110098.665ENSJJAG00000023151Upf110098.665Jaculus_jaculus
ENSMMUG00000023286UPF110092.192ENSKMAG00000004962upf110092.103Kryptolebias_marmoratus
ENSMMUG00000023286UPF110091.925ENSLBEG00000027848-10091.925Labrus_bergylta
ENSMMUG00000023286UPF110088.869ENSLBEG00000014862upf110090.009Labrus_bergylta
ENSMMUG00000023286UPF16297.274ENSLACG00000008482UPF110097.274Latimeria_chalumnae
ENSMMUG00000023286UPF110094.494ENSLOCG00000002072upf110094.494Lepisosteus_oculatus
ENSMMUG00000023286UPF110098.761ENSLAFG00000014963UPF110098.761Loxodonta_africana
ENSMMUG00000023286UPF1100100.000ENSMFAG00000037748UPF1100100.000Macaca_fascicularis
ENSMMUG00000023286UPF1100100.000ENSMNEG00000000046UPF1100100.000Macaca_nemestrina
ENSMMUG00000023286UPF194100.000ENSMLEG00000028404UPF1100100.000Mandrillus_leucophaeus
ENSMMUG00000023286UPF110089.151ENSMAMG00000006229upf110090.114Mastacembelus_armatus
ENSMMUG00000023286UPF110091.304ENSMAMG00000006231-10091.748Mastacembelus_armatus
ENSMMUG00000023286UPF110092.007ENSMZEG00005016386-10091.918Maylandia_zebra
ENSMMUG00000023286UPF110089.248ENSMZEG00005003489upf110090.422Maylandia_zebra
ENSMMUG00000023286UPF19497.719ENSMGAG00000004745UPF110097.719Meleagris_gallopavo
ENSMMUG00000023286UPF19597.403ENSMAUG00000011398Upf19797.403Mesocricetus_auratus
ENSMMUG00000023286UPF110098.583ENSMICG00000001659UPF110098.583Microcebus_murinus
ENSMMUG00000023286UPF110098.754ENSMOCG00000005699Upf110098.754Microtus_ochrogaster
ENSMMUG00000023286UPF110090.044ENSMMOG00000007881upf110090.497Mola_mola
ENSMMUG00000023286UPF19491.548ENSMMOG00000007537-9991.643Mola_mola
ENSMMUG00000023286UPF110098.147ENSMODG00000003689UPF110098.147Monodelphis_domestica
ENSMMUG00000023286UPF110090.813ENSMALG00000018100-10090.813Monopterus_albus
ENSMMUG00000023286UPF110090.222ENSMALG00000000144upf110090.489Monopterus_albus
ENSMMUG00000023286UPF110098.843MGP_CAROLIEiJ_G0031142Upf110098.843Mus_caroli
ENSMMUG00000023286UPF110098.843ENSMUSG00000058301Upf110098.843Mus_musculus
ENSMMUG00000023286UPF110098.843MGP_PahariEiJ_G0021607Upf110098.843Mus_pahari
ENSMMUG00000023286UPF110098.843MGP_SPRETEiJ_G0032260Upf110098.843Mus_spretus
ENSMMUG00000023286UPF110098.673ENSMPUG00000015516UPF110098.673Mustela_putorius_furo
ENSMMUG00000023286UPF19998.224ENSMLUG00000012122UPF19998.224Myotis_lucifugus
ENSMMUG00000023286UPF110098.671ENSNGAG00000024107Upf110098.671Nannospalax_galili
ENSMMUG00000023286UPF110088.594ENSNBRG00000000670upf110088.938Neolamprologus_brichardi
ENSMMUG00000023286UPF110089.715ENSNBRG00000022069-10092.885Neolamprologus_brichardi
ENSMMUG00000023286UPF19494.202ENSNLEG00000006062UPF110094.202Nomascus_leucogenys
ENSMMUG00000023286UPF18394.314ENSMEUG00000014146-8394.314Notamacropus_eugenii
ENSMMUG00000023286UPF19490.589ENSOPRG00000014018UPF110090.589Ochotona_princeps
ENSMMUG00000023286UPF110098.221ENSODEG00000012426UPF110098.221Octodon_degus
ENSMMUG00000023286UPF110089.510ENSONIG00000010452upf110090.685Oreochromis_niloticus
ENSMMUG00000023286UPF110092.096ENSONIG00000012729-10092.007Oreochromis_niloticus
ENSMMUG00000023286UPF110097.606ENSOANG00000004568UPF110097.606Ornithorhynchus_anatinus
ENSMMUG00000023286UPF110091.925ENSORLG00000008453upf110091.925Oryzias_latipes
ENSMMUG00000023286UPF110091.755ENSORLG00020014758upf110091.755Oryzias_latipes_hni
ENSMMUG00000023286UPF110091.755ENSORLG00015010165upf110091.755Oryzias_latipes_hsok
ENSMMUG00000023286UPF110092.014ENSOMEG00000003665upf110091.925Oryzias_melastigma
ENSMMUG00000023286UPF110098.937ENSOGAG00000012866UPF110098.937Otolemur_garnettii
ENSMMUG00000023286UPF19697.240ENSOARG00000010739UPF110097.240Ovis_aries
ENSMMUG00000023286UPF19599.065ENSPPAG00000043884UPF19799.065Pan_paniscus
ENSMMUG00000023286UPF110099.558ENSPPRG00000023470UPF110099.558Panthera_pardus
ENSMMUG00000023286UPF19496.575ENSPTIG00000010159UPF19996.575Panthera_tigris_altaica
ENSMMUG00000023286UPF1100100.000ENSPTRG00000010721UPF1100100.000Pan_troglodytes
ENSMMUG00000023286UPF1100100.000ENSPANG00000008847UPF1100100.000Papio_anubis
ENSMMUG00000023286UPF19491.910ENSPKIG00000006069upf19991.816Paramormyrops_kingsleyae
ENSMMUG00000023286UPF16897.908ENSPSIG00000009491UPF110097.908Pelodiscus_sinensis
ENSMMUG00000023286UPF110088.761ENSPMGG00000017327upf110088.869Periophthalmus_magnuspinnatus
ENSMMUG00000023286UPF110098.932ENSPEMG00000001085Upf110098.932Peromyscus_maniculatus_bairdii
ENSMMUG00000023286UPF110087.111ENSPMAG00000001206upf110086.549Petromyzon_marinus
ENSMMUG00000023286UPF110097.699ENSPCIG00000006156UPF110097.699Phascolarctos_cinereus
ENSMMUG00000023286UPF110091.829ENSPLAG00000016232-10091.741Poecilia_latipinna
ENSMMUG00000023286UPF110088.820ENSPLAG00000018155-10088.732Poecilia_latipinna
ENSMMUG00000023286UPF110089.362ENSPMEG00000011443-10089.273Poecilia_mexicana
ENSMMUG00000023286UPF110091.918ENSPMEG00000016319-10091.829Poecilia_mexicana
ENSMMUG00000023286UPF110091.652ENSPREG00000011247-10091.563Poecilia_reticulata
ENSMMUG00000023286UPF110089.261ENSPREG00000009940upf110089.261Poecilia_reticulata
ENSMMUG00000023286UPF110095.040ENSPPYG00000009752UPF110095.040Pongo_abelii
ENSMMUG00000023286UPF176100.000ENSPCAG00000012962UPF176100.000Procavia_capensis
ENSMMUG00000023286UPF110099.469ENSPCOG00000023813UPF110099.469Propithecus_coquereli
ENSMMUG00000023286UPF169100.000ENSPVAG00000003183UPF169100.000Pteropus_vampyrus
ENSMMUG00000023286UPF110092.007ENSPNYG00000016731-10091.918Pundamilia_nyererei
ENSMMUG00000023286UPF110089.248ENSPNYG00000003694upf110090.422Pundamilia_nyererei
ENSMMUG00000023286UPF110092.635ENSPNAG00000025614upf110093.079Pygocentrus_nattereri
ENSMMUG00000023286UPF110098.843ENSRNOG00000020134Upf110098.843Rattus_norvegicus
ENSMMUG00000023286UPF19596.916ENSRBIG00000013894UPF19898.593Rhinopithecus_bieti
ENSMMUG00000023286UPF19599.252ENSRROG00000040935UPF19999.252Rhinopithecus_roxellana
ENSMMUG00000023286UPF17655.309YMR080CNAM78655.309Saccharomyces_cerevisiae
ENSMMUG00000023286UPF19698.239ENSSBOG00000023632UPF19998.239Saimiri_boliviensis_boliviensis
ENSMMUG00000023286UPF19498.860ENSSHAG00000010499UPF110098.860Sarcophilus_harrisii
ENSMMUG00000023286UPF110094.494ENSSFOG00015021095upf19996.198Scleropages_formosus
ENSMMUG00000023286UPF110092.103ENSSMAG00000021018-10092.103Scophthalmus_maximus
ENSMMUG00000023286UPF110088.519ENSSMAG00000005055upf110089.317Scophthalmus_maximus
ENSMMUG00000023286UPF110089.414ENSSDUG00000013320upf110090.376Seriola_dumerili
ENSMMUG00000023286UPF110092.280ENSSDUG00000009629-10092.280Seriola_dumerili
ENSMMUG00000023286UPF110090.203ENSSLDG00000020868upf110090.661Seriola_lalandi_dorsalis
ENSMMUG00000023286UPF110092.280ENSSLDG00000006878-10092.280Seriola_lalandi_dorsalis
ENSMMUG00000023286UPF110096.533ENSSPUG00000010538UPF110096.533Sphenodon_punctatus
ENSMMUG00000023286UPF110088.721ENSSPAG00000000003upf110088.663Stegastes_partitus
ENSMMUG00000023286UPF110092.274ENSSPAG00000011521-10092.185Stegastes_partitus
ENSMMUG00000023286UPF110099.115ENSSSCG00000039301UPF110099.115Sus_scrofa
ENSMMUG00000023286UPF18390.000ENSTGUG00000001057UPF110095.569Taeniopygia_guttata
ENSMMUG00000023286UPF110090.941ENSTRUG00000005131-10090.941Takifugu_rubripes
ENSMMUG00000023286UPF110089.956ENSTRUG00000000150upf110089.956Takifugu_rubripes
ENSMMUG00000023286UPF110094.425ENSTTRG00000011544UPF110094.144Tursiops_truncatus
ENSMMUG00000023286UPF110098.584ENSUAMG00000007093UPF110098.584Ursus_americanus
ENSMMUG00000023286UPF19697.961ENSUMAG00000006652UPF19998.769Ursus_maritimus
ENSMMUG00000023286UPF110098.673ENSVVUG00000007797UPF110098.673Vulpes_vulpes
ENSMMUG00000023286UPF110082.379ENSXETG00000013602upf110082.379Xenopus_tropicalis
ENSMMUG00000023286UPF19789.164ENSXCOG00000015275-9689.073Xiphophorus_couchianus
ENSMMUG00000023286UPF19393.858ENSXCOG00000005764-10093.858Xiphophorus_couchianus
ENSMMUG00000023286UPF110089.432ENSXMAG00000001703-10089.343Xiphophorus_maculatus
ENSMMUG00000023286UPF110091.741ENSXMAG00000002540-10091.652Xiphophorus_maculatus