EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000029256 (Gene tree)
Gene ID: 106999505
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 51675 bases
Position: chr7:140152656-140204330
Accession: 106999505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000055292	RRM_1	PF00076.22	7.8e-13	1	1
ENSMMUP00000053897	RRM_1	PF00076.22	7.9e-13	1	1
ENSMMUP00000032696	RRM_1	PF00076.22	1.2e-12	1	1
ENSMMUP00000058592	RRM_1	PF00076.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000039632	SLIRP-203	324	XM_015144260	ENSMMUP00000032696	107 (aa)	XP_014999746	F6RQZ9
ENSMMUT00000055801	SLIRP-202	297	-	ENSMMUP00000055292	98 (aa)	-	A0A1D5R4Q6
ENSMMUT00000057392	SLIRP-204	279	-	ENSMMUP00000053897	93 (aa)	-	A0A1D5R0R4
ENSMMUT00000069178	SLIRP-201	363	-	ENSMMUP00000058592	120 (aa)	-	A0A1D5RE49
ENSMMUT00000075181	SLIRP-205	204	-	ENSMMUP00000058749	67 (aa)	-	A0A1D5REK6

Gene Model

Click here to download ENSMMUG00000029256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000029256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000029256	SLIRP	79	32.222	ENSMMUG00000002069	MSI2	57	33.333
ENSMMUG00000029256	SLIRP	73	32.353	ENSMMUG00000031391	RBM38	70	30.588
ENSMMUG00000029256	SLIRP	87	30.864	ENSMMUG00000015777	HNRNPDL	69	30.435
ENSMMUG00000029256	SLIRP	89	35.385	ENSMMUG00000003996	HNRNPAB	50	35.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000029256	SLIRP	84	85.897	ENSG00000119705	SLIRP	100	86.957	Homo_sapiens
ENSMMUG00000029256	SLIRP	72	58.209	ENSAPOG00000001298	slirp	83	54.217	Acanthochromis_polyacanthus
ENSMMUG00000029256	SLIRP	96	80.899	ENSAMEG00000003975	SLIRP	87	79.747	Ailuropoda_melanoleuca
ENSMMUG00000029256	SLIRP	72	59.701	ENSACIG00000023083	slirp	83	54.762	Amphilophus_citrinellus
ENSMMUG00000029256	SLIRP	72	58.209	ENSAOCG00000006342	slirp	85	53.571	Amphiprion_ocellaris
ENSMMUG00000029256	SLIRP	73	57.353	ENSAPEG00000015917	slirp	85	53.571	Amphiprion_percula
ENSMMUG00000029256	SLIRP	73	57.353	ENSAPEG00000015719	-	86	53.571	Amphiprion_percula
ENSMMUG00000029256	SLIRP	72	59.701	ENSATEG00000013525	slirp	83	54.217	Anabas_testudineus
ENSMMUG00000029256	SLIRP	79	52.874	ENSAMXG00000018693	slirp	87	52.874	Astyanax_mexicanus
ENSMMUG00000029256	SLIRP	99	88.043	ENSCJAG00000016946	SLIRP	87	90.123	Callithrix_jacchus
ENSMMUG00000029256	SLIRP	95	78.409	ENSCAFG00020015876	-	90	72.000	Canis_lupus_dingo
ENSMMUG00000029256	SLIRP	100	80.734	ENSCCAG00000030130	SLIRP	90	81.633	Cebus_capucinus
ENSMMUG00000029256	SLIRP	100	98.980	ENSCATG00000036327	SLIRP	100	98.980	Cercocebus_atys
ENSMMUG00000029256	SLIRP	100	97.248	ENSCSAG00000011736	SLIRP	100	97.248	Chlorocebus_sabaeus
ENSMMUG00000029256	SLIRP	72	59.701	ENSCPBG00000026327	SLIRP	72	57.746	Chrysemys_picta_bellii
ENSMMUG00000029256	SLIRP	86	96.429	ENSCANG00000032892	SLIRP	94	94.565	Colobus_angolensis_palliatus
ENSMMUG00000029256	SLIRP	95	72.727	ENSCGRG00001024068	Slirp	83	69.565	Cricetulus_griseus_chok1gshd
ENSMMUG00000029256	SLIRP	95	72.727	ENSCGRG00000017440	Slirp	83	69.565	Cricetulus_griseus_crigri
ENSMMUG00000029256	SLIRP	92	47.674	ENSCSEG00000015766	slirp	73	52.778	Cynoglossus_semilaevis
ENSMMUG00000029256	SLIRP	72	65.672	ENSCVAG00000012504	slirp	68	65.217	Cyprinodon_variegatus
ENSMMUG00000029256	SLIRP	73	61.765	ENSDARG00000097753	slirp	81	57.831	Danio_rerio
ENSMMUG00000029256	SLIRP	81	65.556	ENSDNOG00000007721	SLIRP	90	61.616	Dasypus_novemcinctus
ENSMMUG00000029256	SLIRP	95	72.727	ENSDORG00000012379	Slirp	90	68.000	Dipodomys_ordii
ENSMMUG00000029256	SLIRP	90	66.327	ENSETEG00000010345	SLIRP	100	67.890	Echinops_telfairi
ENSMMUG00000029256	SLIRP	95	82.955	ENSEASG00005020193	SLIRP	90	76.000	Equus_asinus_asinus
ENSMMUG00000029256	SLIRP	92	61.628	ENSEEUG00000007257	SLIRP	90	58.696	Erinaceus_europaeus
ENSMMUG00000029256	SLIRP	70	60.000	ENSELUG00000016800	slirp	82	53.012	Esox_lucius
ENSMMUG00000029256	SLIRP	97	81.111	ENSFCAG00000036326	SLIRP	87	77.907	Felis_catus
ENSMMUG00000029256	SLIRP	72	56.716	ENSFALG00000012583	SLIRP	64	57.353	Ficedula_albicollis
ENSMMUG00000029256	SLIRP	96	65.957	ENSFDAG00000008347	SLIRP	86	59.794	Fukomys_damarensis
ENSMMUG00000029256	SLIRP	62	62.069	ENSFHEG00000004709	slirp	80	56.757	Fundulus_heteroclitus
ENSMMUG00000029256	SLIRP	79	54.545	ENSGMOG00000016948	slirp	73	54.545	Gadus_morhua
ENSMMUG00000029256	SLIRP	72	58.209	ENSGALG00000031238	SLIRP	74	57.143	Gallus_gallus
ENSMMUG00000029256	SLIRP	75	65.714	ENSGAFG00000010998	slirp	84	60.714	Gambusia_affinis
ENSMMUG00000029256	SLIRP	73	58.824	ENSGACG00000020137	slirp	98	52.381	Gasterosteus_aculeatus
ENSMMUG00000029256	SLIRP	79	59.740	ENSGAGG00000009953	SLIRP	52	61.842	Gopherus_agassizii
ENSMMUG00000029256	SLIRP	85	86.076	ENSGGOG00000011059	-	100	87.097	Gorilla_gorilla
ENSMMUG00000029256	SLIRP	100	62.162	ENSHGLG00000018491	SLIRP	90	61.000	Heterocephalus_glaber_female
ENSMMUG00000029256	SLIRP	100	62.162	ENSHGLG00100014153	SLIRP	90	61.000	Heterocephalus_glaber_male
ENSMMUG00000029256	SLIRP	73	63.235	ENSHCOG00000006795	slirp	85	57.143	Hippocampus_comes
ENSMMUG00000029256	SLIRP	70	61.538	ENSIPUG00000010214	SLIRP	83	55.422	Ictalurus_punctatus
ENSMMUG00000029256	SLIRP	90	70.000	ENSSTOG00000034316	SLIRP	90	70.000	Ictidomys_tridecemlineatus
ENSMMUG00000029256	SLIRP	79	50.649	ENSKMAG00000002038	slirp	73	50.649	Kryptolebias_marmoratus
ENSMMUG00000029256	SLIRP	79	52.941	ENSLBEG00000007564	slirp	85	52.941	Labrus_bergylta
ENSMMUG00000029256	SLIRP	81	53.333	ENSLACG00000013434	SLIRP	87	53.333	Latimeria_chalumnae
ENSMMUG00000029256	SLIRP	100	98.980	ENSMFAG00000042960	SLIRP	100	98.980	Macaca_fascicularis
ENSMMUG00000029256	SLIRP	100	98.980	ENSMNEG00000028921	SLIRP	100	98.980	Macaca_nemestrina
ENSMMUG00000029256	SLIRP	100	98.980	ENSMLEG00000043644	SLIRP	100	98.980	Mandrillus_leucophaeus
ENSMMUG00000029256	SLIRP	72	61.194	ENSMZEG00005004617	slirp	84	55.422	Maylandia_zebra
ENSMMUG00000029256	SLIRP	100	68.468	ENSMAUG00000003857	Slirp	90	69.000	Mesocricetus_auratus
ENSMMUG00000029256	SLIRP	96	75.281	ENSMICG00000012080	SLIRP	91	68.807	Microcebus_murinus
ENSMMUG00000029256	SLIRP	95	73.864	ENSMOCG00000016019	Slirp	96	71.296	Microtus_ochrogaster
ENSMMUG00000029256	SLIRP	79	50.588	ENSMMOG00000018268	slirp	87	50.000	Mola_mola
ENSMMUG00000029256	SLIRP	74	59.420	ENSMODG00000005207	-	100	59.155	Monodelphis_domestica
ENSMMUG00000029256	SLIRP	93	46.465	ENSMALG00000012581	slirp	86	52.381	Monopterus_albus
ENSMMUG00000029256	SLIRP	95	77.273	MGP_CAROLIEiJ_G0017995	Slirp	90	72.165	Mus_caroli
ENSMMUG00000029256	SLIRP	95	78.409	ENSMUSG00000021040	Slirp	87	74.227	Mus_musculus
ENSMMUG00000029256	SLIRP	95	78.409	MGP_SPRETEiJ_G0018840	Slirp	87	74.227	Mus_spretus
ENSMMUG00000029256	SLIRP	84	70.213	ENSMLUG00000024998	-	100	69.369	Myotis_lucifugus
ENSMMUG00000029256	SLIRP	90	68.000	ENSMLUG00000029544	-	100	68.468	Myotis_lucifugus
ENSMMUG00000029256	SLIRP	95	69.318	ENSNGAG00000016363	Slirp	87	72.222	Nannospalax_galili
ENSMMUG00000029256	SLIRP	99	85.870	ENSNLEG00000032459	-	87	85.185	Nomascus_leucogenys
ENSMMUG00000029256	SLIRP	93	77.228	ENSNLEG00000027238	-	91	81.013	Nomascus_leucogenys
ENSMMUG00000029256	SLIRP	96	79.775	ENSODEG00000012580	SLIRP	85	80.769	Octodon_degus
ENSMMUG00000029256	SLIRP	72	61.194	ENSONIG00000011692	slirp	86	54.118	Oreochromis_niloticus
ENSMMUG00000029256	SLIRP	95	59.091	ENSOANG00000022366	SLIRP	66	69.863	Ornithorhynchus_anatinus
ENSMMUG00000029256	SLIRP	72	58.209	ENSORLG00000010761	slirp	67	54.023	Oryzias_latipes
ENSMMUG00000029256	SLIRP	72	59.701	ENSORLG00020022188	slirp	86	55.172	Oryzias_latipes_hni
ENSMMUG00000029256	SLIRP	95	50.000	ENSORLG00015020171	slirp	82	53.012	Oryzias_latipes_hsok
ENSMMUG00000029256	SLIRP	72	59.701	ENSOMEG00000019321	slirp	83	55.422	Oryzias_melastigma
ENSMMUG00000029256	SLIRP	85	86.076	ENSPPAG00000040710	-	100	87.097	Pan_paniscus
ENSMMUG00000029256	SLIRP	99	79.381	ENSPPRG00000014350	SLIRP	87	79.070	Panthera_pardus
ENSMMUG00000029256	SLIRP	99	79.381	ENSPTIG00000014196	SLIRP	87	79.070	Panthera_tigris_altaica
ENSMMUG00000029256	SLIRP	85	86.076	ENSPTRG00000030691	SLIRP	100	87.097	Pan_troglodytes
ENSMMUG00000029256	SLIRP	100	97.959	ENSPANG00000026323	SLIRP	100	97.959	Papio_anubis
ENSMMUG00000029256	SLIRP	62	58.621	ENSPKIG00000008831	slirp	60	59.016	Paramormyrops_kingsleyae
ENSMMUG00000029256	SLIRP	72	67.164	ENSPMGG00000010541	slirp	86	64.000	Periophthalmus_magnuspinnatus
ENSMMUG00000029256	SLIRP	83	72.727	ENSPEMG00000013234	Slirp	96	66.972	Peromyscus_maniculatus_bairdii
ENSMMUG00000029256	SLIRP	65	53.333	ENSPMAG00000009355	slirp	79	46.479	Petromyzon_marinus
ENSMMUG00000029256	SLIRP	85	56.790	ENSPCIG00000026842	-	75	61.429	Phascolarctos_cinereus
ENSMMUG00000029256	SLIRP	72	64.179	ENSPFOG00000006758	slirp	84	58.333	Poecilia_formosa
ENSMMUG00000029256	SLIRP	72	64.179	ENSPLAG00000011140	slirp	84	58.333	Poecilia_latipinna
ENSMMUG00000029256	SLIRP	72	64.179	ENSPMEG00000019535	slirp	84	58.333	Poecilia_mexicana
ENSMMUG00000029256	SLIRP	72	64.179	ENSPREG00000011673	slirp	84	58.333	Poecilia_reticulata
ENSMMUG00000029256	SLIRP	90	76.531	ENSPPYG00000006030	SLIRP	100	77.982	Pongo_abelii
ENSMMUG00000029256	SLIRP	96	75.281	ENSPCOG00000015159	SLIRP	90	71.429	Propithecus_coquereli
ENSMMUG00000029256	SLIRP	72	67.164	ENSPNAG00000008633	slirp	85	61.905	Pygocentrus_nattereri
ENSMMUG00000029256	SLIRP	92	96.512	ENSRBIG00000031396	-	86	96.512	Rhinopithecus_bieti
ENSMMUG00000029256	SLIRP	100	97.959	ENSRBIG00000032222	-	100	97.959	Rhinopithecus_bieti
ENSMMUG00000029256	SLIRP	96	88.764	ENSRBIG00000035817	-	89	85.263	Rhinopithecus_bieti
ENSMMUG00000029256	SLIRP	88	89.655	ENSRBIG00000032998	-	94	86.275	Rhinopithecus_bieti
ENSMMUG00000029256	SLIRP	100	96.939	ENSRROG00000036656	-	100	96.939	Rhinopithecus_roxellana
ENSMMUG00000029256	SLIRP	92	95.349	ENSRROG00000035604	-	83	86.747	Rhinopithecus_roxellana
ENSMMUG00000029256	SLIRP	88	91.765	ENSRROG00000017133	-	92	96.591	Rhinopithecus_roxellana
ENSMMUG00000029256	SLIRP	84	93.590	ENSRROG00000041312	-	84	91.860	Rhinopithecus_roxellana
ENSMMUG00000029256	SLIRP	99	83.696	ENSSBOG00000020014	SLIRP	87	85.185	Saimiri_boliviensis_boliviensis
ENSMMUG00000029256	SLIRP	72	59.701	ENSSFOG00015011165	slirp	77	56.579	Scleropages_formosus
ENSMMUG00000029256	SLIRP	71	48.485	ENSSMAG00000012930	slirp	74	45.333	Scophthalmus_maximus
ENSMMUG00000029256	SLIRP	72	62.687	ENSSDUG00000021883	slirp	56	55.294	Seriola_dumerili
ENSMMUG00000029256	SLIRP	72	62.687	ENSSLDG00000023136	slirp	77	55.294	Seriola_lalandi_dorsalis
ENSMMUG00000029256	SLIRP	86	58.025	ENSSPUG00000009346	SLIRP	73	61.111	Sphenodon_punctatus
ENSMMUG00000029256	SLIRP	72	55.224	ENSSPAG00000013477	slirp	83	51.807	Stegastes_partitus
ENSMMUG00000029256	SLIRP	100	72.072	ENSSSCG00000028167	SLIRP	90	72.000	Sus_scrofa
ENSMMUG00000029256	SLIRP	72	58.209	ENSTGUG00000012337	SLIRP	66	58.571	Taeniopygia_guttata
ENSMMUG00000029256	SLIRP	95	46.067	ENSTRUG00000020127	slirp	83	50.000	Takifugu_rubripes
ENSMMUG00000029256	SLIRP	95	80.682	ENSUAMG00000022445	SLIRP	90	73.000	Ursus_americanus
ENSMMUG00000029256	SLIRP	95	80.682	ENSUMAG00000007166	SLIRP	90	74.000	Ursus_maritimus
ENSMMUG00000029256	SLIRP	100	72.477	ENSVPAG00000001781	SLIRP	90	72.449	Vicugna_pacos
ENSMMUG00000029256	SLIRP	83	79.221	ENSVVUG00000004436	SLIRP	100	73.874	Vulpes_vulpes
ENSMMUG00000029256	SLIRP	72	62.687	ENSXETG00000030343	SLIRP	79	62.857	Xenopus_tropicalis
ENSMMUG00000029256	SLIRP	74	63.768	ENSXCOG00000009422	slirp	84	57.143	Xiphophorus_couchianus
ENSMMUG00000029256	SLIRP	74	65.217	ENSXMAG00000015655	slirp	84	59.524	Xiphophorus_maculatus