EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000030408 (Gene tree)
Gene ID: 718712
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 44098 bases
Position: chr3:124860588-124904685
Accession: 718712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000035486	PPR	PF01535.20	7.4e-16	1	2
ENSMMUP00000035486	PPR	PF01535.20	7.4e-16	2	2
ENSMMUP00000042674	PPR	PF01535.20	1.2e-15	1	2
ENSMMUP00000042674	PPR	PF01535.20	1.2e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000068463	-	168	XM_015134377	ENSMMUP00000048538	55 (aa)	XP_014989863	A0A1D5QKG5
ENSMMUT00000057193	-	2253	-	ENSMMUP00000042674	750 (aa)	-	A0A1D5Q3R2
ENSMMUT00000026964	-	306	-	ENSMMUP00000025227	101 (aa)	-	F6QYH0
ENSMMUT00000042480	-	3203	XM_015134374	ENSMMUP00000035486	701 (aa)	XP_014989860	F7DP81

Gene Model

Click here to download ENSMMUG00000030408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000030408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000030408	-	100	93.600	ENSG00000248919	ATP5MF-PTCD1	100	93.600	Homo_sapiens
ENSMMUG00000030408	-	100	93.295	ENSG00000106246	PTCD1	100	93.295	Homo_sapiens
ENSMMUG00000030408	-	80	46.737	ENSAPOG00000010679	ptcd1	85	46.869	Acanthochromis_polyacanthus
ENSMMUG00000030408	-	99	76.882	ENSAMEG00000006224	-	99	76.618	Ailuropoda_melanoleuca
ENSMMUG00000030408	-	83	49.578	ENSACIG00000017861	ptcd1	85	48.760	Amphilophus_citrinellus
ENSMMUG00000030408	-	92	46.319	ENSAOCG00000020741	-	84	47.883	Amphiprion_ocellaris
ENSMMUG00000030408	-	88	45.440	ENSAOCG00000022617	ptcd1	81	48.301	Amphiprion_ocellaris
ENSMMUG00000030408	-	96	45.374	ENSAPEG00000022632	ptcd1	84	47.720	Amphiprion_percula
ENSMMUG00000030408	-	85	49.751	ENSATEG00000007016	ptcd1	80	50.255	Anabas_testudineus
ENSMMUG00000030408	-	87	58.158	ENSAPLG00000006862	-	95	57.997	Anas_platyrhynchos
ENSMMUG00000030408	-	99	55.207	ENSACAG00000012871	-	98	54.485	Anolis_carolinensis
ENSMMUG00000030408	-	98	88.792	ENSANAG00000035790	-	100	88.501	Aotus_nancymaae
ENSMMUG00000030408	-	83	48.398	ENSACLG00000002824	ptcd1	80	48.311	Astatotilapia_calliptera
ENSMMUG00000030408	-	89	46.462	ENSAMXG00000037292	ptcd1	91	46.462	Astyanax_mexicanus
ENSMMUG00000030408	-	100	76.629	ENSBTAG00000020440	-	87	76.412	Bos_taurus
ENSMMUG00000030408	-	100	89.205	ENSCJAG00000015815	-	100	88.778	Callithrix_jacchus
ENSMMUG00000030408	-	100	75.141	ENSCAFG00000015055	-	99	74.934	Canis_familiaris
ENSMMUG00000030408	-	100	75.141	ENSCAFG00020014480	-	94	74.965	Canis_lupus_dingo
ENSMMUG00000030408	-	100	76.028	ENSCHIG00000027000	-	99	75.745	Capra_hircus
ENSMMUG00000030408	-	100	79.802	ENSTSYG00000029495	-	100	79.379	Carlito_syrichta
ENSMMUG00000030408	-	93	74.618	ENSCAPG00000014660	-	99	74.312	Cavia_aperea
ENSMMUG00000030408	-	99	73.894	ENSCPOG00000001780	-	99	73.609	Cavia_porcellus
ENSMMUG00000030408	-	100	87.234	ENSCCAG00000034025	-	100	87.234	Cebus_capucinus
ENSMMUG00000030408	-	100	99.287	ENSCATG00000040859	-	100	99.287	Cercocebus_atys
ENSMMUG00000030408	-	98	76.218	ENSCLAG00000006354	-	100	75.352	Chinchilla_lanigera
ENSMMUG00000030408	-	91	97.348	ENSCSAG00000017794	-	95	97.348	Chlorocebus_sabaeus
ENSMMUG00000030408	-	97	54.707	ENSCPBG00000020866	-	97	54.595	Chrysemys_picta_bellii
ENSMMUG00000030408	-	82	31.579	ENSCING00000007717	-	90	32.472	Ciona_intestinalis
ENSMMUG00000030408	-	100	94.579	ENSCANG00000023441	-	100	94.579	Colobus_angolensis_palliatus
ENSMMUG00000030408	-	99	74.212	ENSCGRG00001023686	Ptcd1	99	74.212	Cricetulus_griseus_chok1gshd
ENSMMUG00000030408	-	99	73.789	ENSCGRG00000015031	Ptcd1	99	73.789	Cricetulus_griseus_crigri
ENSMMUG00000030408	-	84	48.067	ENSCSEG00000002378	ptcd1	84	46.519	Cynoglossus_semilaevis
ENSMMUG00000030408	-	85	48.510	ENSCVAG00000003621	ptcd1	88	47.920	Cyprinodon_variegatus
ENSMMUG00000030408	-	83	49.239	ENSCVAG00000015826	ptcd1	81	48.639	Cyprinodon_variegatus
ENSMMUG00000030408	-	94	45.845	ENSDARG00000076176	ptcd1	99	45.429	Danio_rerio
ENSMMUG00000030408	-	99	73.088	ENSDNOG00000009957	-	99	73.088	Dasypus_novemcinctus
ENSMMUG00000030408	-	98	73.813	ENSDORG00000000740	Ptcd1	99	73.669	Dipodomys_ordii
ENSMMUG00000030408	-	90	40.741	ENSEBUG00000014515	ptcd1	99	41.157	Eptatretus_burgeri
ENSMMUG00000030408	-	100	78.401	ENSEASG00005002480	-	100	77.840	Equus_asinus_asinus
ENSMMUG00000030408	-	100	78.822	ENSECAG00000016617	-	100	78.261	Equus_caballus
ENSMMUG00000030408	-	84	48.077	ENSELUG00000016517	ptcd1	82	48.071	Esox_lucius
ENSMMUG00000030408	-	100	75.599	ENSFCAG00000015069	-	100	75.176	Felis_catus
ENSMMUG00000030408	-	93	57.205	ENSFALG00000013803	-	92	58.929	Ficedula_albicollis
ENSMMUG00000030408	-	100	75.461	ENSFDAG00000006393	-	100	75.319	Fukomys_damarensis
ENSMMUG00000030408	-	74	46.629	ENSFHEG00000012491	ptcd1	87	46.629	Fundulus_heteroclitus
ENSMMUG00000030408	-	86	47.611	ENSGMOG00000007639	ptcd1	96	47.611	Gadus_morhua
ENSMMUG00000030408	-	92	56.889	ENSGALG00000004711	-	92	56.889	Gallus_gallus
ENSMMUG00000030408	-	84	47.819	ENSGAFG00000013175	ptcd1	82	47.892	Gambusia_affinis
ENSMMUG00000030408	-	87	48.534	ENSGACG00000016607	ptcd1	91	48.371	Gasterosteus_aculeatus
ENSMMUG00000030408	-	92	54.532	ENSGAGG00000021832	-	100	54.315	Gopherus_agassizii
ENSMMUG00000030408	-	99	93.286	ENSGGOG00000015123	-	99	93.286	Gorilla_gorilla
ENSMMUG00000030408	-	83	48.229	ENSHBUG00000018275	ptcd1	80	48.142	Haplochromis_burtoni
ENSMMUG00000030408	-	100	75.921	ENSHGLG00000017621	-	100	75.779	Heterocephalus_glaber_female
ENSMMUG00000030408	-	100	75.921	ENSHGLG00100007218	-	100	75.779	Heterocephalus_glaber_male
ENSMMUG00000030408	-	85	47.667	ENSHCOG00000010784	ptcd1	82	48.276	Hippocampus_comes
ENSMMUG00000030408	-	100	73.913	ENSSTOG00000001682	-	100	73.492	Ictidomys_tridecemlineatus
ENSMMUG00000030408	-	100	73.333	ENSJJAG00000000319	Ptcd1	100	73.050	Jaculus_jaculus
ENSMMUG00000030408	-	83	48.398	ENSKMAG00000008708	ptcd1	80	48.311	Kryptolebias_marmoratus
ENSMMUG00000030408	-	87	47.826	ENSLBEG00000008061	ptcd1	83	48.130	Labrus_bergylta
ENSMMUG00000030408	-	87	58.587	ENSLACG00000011172	ptcd1	86	58.587	Latimeria_chalumnae
ENSMMUG00000030408	-	86	54.705	ENSLOCG00000004833	ptcd1	93	55.017	Lepisosteus_oculatus
ENSMMUG00000030408	-	99	70.438	ENSLAFG00000002588	-	99	70.297	Loxodonta_africana
ENSMMUG00000030408	-	100	99.715	ENSMFAG00000041324	-	100	99.715	Macaca_fascicularis
ENSMMUG00000030408	-	100	99.429	ENSMNEG00000043786	-	100	99.429	Macaca_nemestrina
ENSMMUG00000030408	-	100	76.320	ENSMLEG00000031179	-	100	78.459	Mandrillus_leucophaeus
ENSMMUG00000030408	-	88	48.714	ENSMAMG00000007623	ptcd1	80	49.829	Mastacembelus_armatus
ENSMMUG00000030408	-	83	48.398	ENSMZEG00005012722	ptcd1	80	48.311	Maylandia_zebra
ENSMMUG00000030408	-	98	56.053	ENSMGAG00000004211	-	99	56.316	Meleagris_gallopavo
ENSMMUG00000030408	-	99	77.574	ENSMICG00000017428	-	99	77.151	Microcebus_murinus
ENSMMUG00000030408	-	87	46.982	ENSMMOG00000020243	ptcd1	88	48.294	Mola_mola
ENSMMUG00000030408	-	98	58.436	ENSMODG00000001350	-	99	58.356	Monodelphis_domestica
ENSMMUG00000030408	-	83	49.916	ENSMALG00000018442	ptcd1	80	49.745	Monopterus_albus
ENSMMUG00000030408	-	99	74.603	MGP_CAROLIEiJ_G0028011	Ptcd1	99	74.603	Mus_caroli
ENSMMUG00000030408	-	99	74.315	ENSMUSG00000029624	Ptcd1	99	74.315	Mus_musculus
ENSMMUG00000030408	-	99	74.747	MGP_PahariEiJ_G0024580	Ptcd1	99	74.747	Mus_pahari
ENSMMUG00000030408	-	99	74.459	MGP_SPRETEiJ_G0029012	Ptcd1	99	74.459	Mus_spretus
ENSMMUG00000030408	-	100	74.860	ENSMPUG00000016518	-	100	74.719	Mustela_putorius_furo
ENSMMUG00000030408	-	100	78.511	ENSMLUG00000010994	-	100	77.675	Myotis_lucifugus
ENSMMUG00000030408	-	88	47.235	ENSNBRG00000010079	ptcd1	85	47.876	Neolamprologus_brichardi
ENSMMUG00000030408	-	100	91.972	ENSNLEG00000011060	-	100	95.091	Nomascus_leucogenys
ENSMMUG00000030408	-	97	62.089	ENSMEUG00000006930	-	99	62.089	Notamacropus_eugenii
ENSMMUG00000030408	-	89	75.878	ENSOPRG00000013647	-	89	75.878	Ochotona_princeps
ENSMMUG00000030408	-	83	47.386	ENSONIG00000003168	ptcd1	95	47.297	Oreochromis_niloticus
ENSMMUG00000030408	-	80	57.979	ENSOANG00000007728	-	73	57.658	Ornithorhynchus_anatinus
ENSMMUG00000030408	-	99	72.340	ENSOCUG00000010584	-	98	71.773	Oryctolagus_cuniculus
ENSMMUG00000030408	-	85	48.918	ENSORLG00000009275	ptcd1	85	48.997	Oryzias_latipes
ENSMMUG00000030408	-	85	47.619	ENSORLG00020000988	ptcd1	85	47.690	Oryzias_latipes_hni
ENSMMUG00000030408	-	85	48.253	ENSORLG00015010557	ptcd1	85	48.328	Oryzias_latipes_hsok
ENSMMUG00000030408	-	85	48.419	ENSOMEG00000020627	ptcd1	87	48.576	Oryzias_melastigma
ENSMMUG00000030408	-	99	75.143	ENSOGAG00000010877	-	100	74.714	Otolemur_garnettii
ENSMMUG00000030408	-	100	71.955	ENSOARG00000018676	-	100	71.671	Ovis_aries
ENSMMUG00000030408	-	100	92.867	ENSPPAG00000036024	-	100	92.867	Pan_paniscus
ENSMMUG00000030408	-	100	76.204	ENSPPRG00000003478	-	100	75.921	Panthera_pardus
ENSMMUG00000030408	-	100	92.867	ENSPTRG00000019452	-	100	92.867	Pan_troglodytes
ENSMMUG00000030408	-	100	99.144	ENSPANG00000016730	-	100	99.144	Papio_anubis
ENSMMUG00000030408	-	96	48.555	ENSPKIG00000014215	ptcd1	97	48.476	Paramormyrops_kingsleyae
ENSMMUG00000030408	-	84	57.596	ENSPSIG00000011184	-	100	57.973	Pelodiscus_sinensis
ENSMMUG00000030408	-	73	41.143	ENSPMAG00000009667	ptcd1	99	41.143	Petromyzon_marinus
ENSMMUG00000030408	-	98	59.917	ENSPCIG00000024778	-	98	59.726	Phascolarctos_cinereus
ENSMMUG00000030408	-	90	46.238	ENSPFOG00000004458	ptcd1	82	48.229	Poecilia_formosa
ENSMMUG00000030408	-	84	47.236	ENSPLAG00000011051	ptcd1	82	47.306	Poecilia_latipinna
ENSMMUG00000030408	-	90	46.708	ENSPMEG00000020547	ptcd1	86	46.395	Poecilia_mexicana
ENSMMUG00000030408	-	82	47.218	ENSPREG00000000059	ptcd1	81	47.288	Poecilia_reticulata
ENSMMUG00000030408	-	95	93.363	ENSPPYG00000017377	-	100	93.363	Pongo_abelii
ENSMMUG00000030408	-	81	74.286	ENSPCAG00000001852	-	88	72.477	Procavia_capensis
ENSMMUG00000030408	-	99	79.202	ENSPCOG00000018596	-	99	78.329	Propithecus_coquereli
ENSMMUG00000030408	-	67	87.000	ENSPVAG00000007529	-	72	87.000	Pteropus_vampyrus
ENSMMUG00000030408	-	83	48.061	ENSPNYG00000019993	ptcd1	80	47.973	Pundamilia_nyererei
ENSMMUG00000030408	-	86	49.679	ENSPNAG00000014931	ptcd1	90	48.815	Pygocentrus_nattereri
ENSMMUG00000030408	-	98	74.381	ENSRNOG00000000987	Ptcd1	98	74.601	Rattus_norvegicus
ENSMMUG00000030408	-	100	95.150	ENSRBIG00000043393	-	100	95.150	Rhinopithecus_bieti
ENSMMUG00000030408	-	100	95.007	ENSRROG00000036420	-	100	95.007	Rhinopithecus_roxellana
ENSMMUG00000030408	-	100	88.620	ENSSBOG00000024114	-	100	88.336	Saimiri_boliviensis_boliviensis
ENSMMUG00000030408	-	98	57.261	ENSSHAG00000011376	-	98	61.883	Sarcophilus_harrisii
ENSMMUG00000030408	-	85	53.409	ENSSFOG00015007909	ptcd1	82	53.997	Scleropages_formosus
ENSMMUG00000030408	-	83	48.316	ENSSMAG00000000218	ptcd1	91	47.643	Scophthalmus_maximus
ENSMMUG00000030408	-	88	46.984	ENSSDUG00000015671	ptcd1	86	47.326	Seriola_dumerili
ENSMMUG00000030408	-	84	48.495	ENSSLDG00000014261	ptcd1	83	48.316	Seriola_lalandi_dorsalis
ENSMMUG00000030408	-	96	53.825	ENSSPUG00000003540	-	97	53.591	Sphenodon_punctatus
ENSMMUG00000030408	-	84	48.997	ENSSPAG00000011049	ptcd1	80	49.073	Stegastes_partitus
ENSMMUG00000030408	-	92	78.638	ENSSSCG00000007622	-	98	78.234	Sus_scrofa
ENSMMUG00000030408	-	87	61.011	ENSTGUG00000007563	-	99	61.589	Taeniopygia_guttata
ENSMMUG00000030408	-	86	48.052	ENSTRUG00000013471	ptcd1	79	48.722	Takifugu_rubripes
ENSMMUG00000030408	-	85	48.419	ENSTNIG00000008271	ptcd1	83	49.231	Tetraodon_nigroviridis
ENSMMUG00000030408	-	100	74.370	ENSTBEG00000011021	-	100	73.950	Tupaia_belangeri
ENSMMUG00000030408	-	99	75.358	ENSTTRG00000003006	-	99	75.215	Tursiops_truncatus
ENSMMUG00000030408	-	99	76.728	ENSUAMG00000008049	-	99	76.446	Ursus_americanus
ENSMMUG00000030408	-	99	75.035	ENSVVUG00000008836	-	100	74.752	Vulpes_vulpes
ENSMMUG00000030408	-	93	49.926	ENSXETG00000009891	ptcd1	87	52.373	Xenopus_tropicalis
ENSMMUG00000030408	-	90	46.994	ENSXMAG00000015540	ptcd1	85	47.812	Xiphophorus_maculatus