EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000039415 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U1 small nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 6347 bases
Position: chr15:94431953-94438299
Accession: 706270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000047501	zf-U1	PF06220.12	1.9e-22	1	1
ENSMMUP00000057809	zf-U1	PF06220.12	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000066727	-	1408	XM_015117942	ENSMMUP00000057809	159 (aa)	XP_014973428	A0A1D5RBW7
ENSMMUT00000070547	-	453	-	ENSMMUP00000047501	150 (aa)	-	A0A1D5QHI0

Gene Model

Click here to download ENSMMUG00000039415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000039415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000039415	-	100	88.679	ENSMMUG00000045425	-	100	88.679
ENSMMUG00000039415	-	100	97.484	ENSMMUG00000000869	-	100	95.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000039415	-	100	98.742	ENSG00000124562	SNRPC	100	99.153	Homo_sapiens
ENSMMUG00000039415	-	100	96.855	ENSAMEG00000000963	SNRPC	88	96.855	Ailuropoda_melanoleuca
ENSMMUG00000039415	-	100	94.340	ENSACAG00000015721	SNRPC	87	95.541	Anolis_carolinensis
ENSMMUG00000039415	-	100	98.742	ENSANAG00000019696	-	100	98.742	Aotus_nancymaae
ENSMMUG00000039415	-	100	94.340	ENSANAG00000019157	-	100	94.340	Aotus_nancymaae
ENSMMUG00000039415	-	100	86.792	ENSANAG00000021026	-	100	86.000	Aotus_nancymaae
ENSMMUG00000039415	-	100	98.113	ENSANAG00000007843	-	100	98.113	Aotus_nancymaae
ENSMMUG00000039415	-	100	97.333	ENSANAG00000019726	-	92	97.333	Aotus_nancymaae
ENSMMUG00000039415	-	99	90.506	ENSANAG00000020588	-	92	90.506	Aotus_nancymaae
ENSMMUG00000039415	-	100	79.333	ENSANAG00000021444	-	100	79.333	Aotus_nancymaae
ENSMMUG00000039415	-	100	83.648	ENSAMXG00000032641	snrpc	100	71.698	Astyanax_mexicanus
ENSMMUG00000039415	-	100	98.742	ENSBTAG00000024549	SNRPC	100	98.742	Bos_taurus
ENSMMUG00000039415	-	100	96.226	ENSCJAG00000041822	-	100	96.226	Callithrix_jacchus
ENSMMUG00000039415	-	100	98.742	ENSCJAG00000015321	-	100	98.742	Callithrix_jacchus
ENSMMUG00000039415	-	100	97.484	ENSCJAG00000043055	-	100	97.484	Callithrix_jacchus
ENSMMUG00000039415	-	74	99.153	ENSCAFG00000001231	-	93	99.153	Canis_familiaris
ENSMMUG00000039415	-	100	96.250	ENSCAFG00000028988	-	100	96.250	Canis_familiaris
ENSMMUG00000039415	-	100	77.358	ENSCAFG00000025525	-	100	77.358	Canis_familiaris
ENSMMUG00000039415	-	100	94.340	ENSCAFG00000031775	-	100	94.340	Canis_familiaris
ENSMMUG00000039415	-	100	94.340	ENSCAFG00020017383	-	100	94.340	Canis_lupus_dingo
ENSMMUG00000039415	-	99	87.261	ENSCAFG00020009944	-	90	87.261	Canis_lupus_dingo
ENSMMUG00000039415	-	100	94.969	ENSCAFG00020005758	-	99	95.541	Canis_lupus_dingo
ENSMMUG00000039415	-	100	77.528	ENSCAFG00020026577	-	100	83.708	Canis_lupus_dingo
ENSMMUG00000039415	-	100	98.742	ENSCAFG00020005945	-	100	98.742	Canis_lupus_dingo
ENSMMUG00000039415	-	100	71.069	ENSCHIG00000005039	-	100	70.395	Capra_hircus
ENSMMUG00000039415	-	100	98.113	ENSCHIG00000012087	-	100	98.113	Capra_hircus
ENSMMUG00000039415	-	99	87.975	ENSTSYG00000029745	-	65	93.023	Carlito_syrichta
ENSMMUG00000039415	-	100	81.761	ENSTSYG00000025721	-	100	76.730	Carlito_syrichta
ENSMMUG00000039415	-	100	98.742	ENSTSYG00000011216	-	100	98.742	Carlito_syrichta
ENSMMUG00000039415	-	89	98.592	ENSCAPG00000005161	SNRPC	100	98.592	Cavia_aperea
ENSMMUG00000039415	-	100	98.742	ENSCPOG00000008563	SNRPC	100	98.742	Cavia_porcellus
ENSMMUG00000039415	-	100	93.082	ENSCCAG00000036059	-	89	93.082	Cebus_capucinus
ENSMMUG00000039415	-	100	72.667	ENSCCAG00000028293	-	100	72.667	Cebus_capucinus
ENSMMUG00000039415	-	98	80.128	ENSCCAG00000022209	-	95	80.128	Cebus_capucinus
ENSMMUG00000039415	-	98	90.385	ENSCCAG00000022751	-	95	90.385	Cebus_capucinus
ENSMMUG00000039415	-	99	80.405	ENSCCAG00000026624	-	66	74.522	Cebus_capucinus
ENSMMUG00000039415	-	100	98.742	ENSCATG00000035787	SNRPC	100	98.742	Cercocebus_atys
ENSMMUG00000039415	-	99	80.255	ENSCLAG00000010242	-	96	80.255	Chinchilla_lanigera
ENSMMUG00000039415	-	100	98.742	ENSCLAG00000016920	SNRPC	100	98.742	Chinchilla_lanigera
ENSMMUG00000039415	-	100	78.090	ENSCSAG00000009821	SNRPC	100	84.270	Chlorocebus_sabaeus
ENSMMUG00000039415	-	100	79.874	ENSCHOG00000011439	SNRPC	88	80.892	Choloepus_hoffmanni
ENSMMUG00000039415	-	100	96.226	ENSCPBG00000027142	SNRPC	100	96.226	Chrysemys_picta_bellii
ENSMMUG00000039415	-	97	51.724	ENSCING00000021229	ci-zf(matrin)-4	51	83.871	Ciona_intestinalis
ENSMMUG00000039415	-	100	98.742	ENSCANG00000028035	SNRPC	100	98.742	Colobus_angolensis_palliatus
ENSMMUG00000039415	-	100	98.113	ENSCGRG00001009011	-	100	98.113	Cricetulus_griseus_chok1gshd
ENSMMUG00000039415	-	100	86.164	ENSCGRG00001021483	-	100	84.277	Cricetulus_griseus_chok1gshd
ENSMMUG00000039415	-	100	96.226	ENSCGRG00000005005	Snrpc	100	96.226	Cricetulus_griseus_crigri
ENSMMUG00000039415	-	99	74.324	ENSCSEG00000016845	snrpc	100	74.000	Cynoglossus_semilaevis
ENSMMUG00000039415	-	100	83.648	ENSDARG00000009871	snrpc	100	83.648	Danio_rerio
ENSMMUG00000039415	-	75	98.319	ENSDNOG00000042403	-	94	98.319	Dasypus_novemcinctus
ENSMMUG00000039415	-	100	97.484	ENSDNOG00000034699	-	99	97.484	Dasypus_novemcinctus
ENSMMUG00000039415	-	95	80.986	ENSDORG00000029823	-	84	80.000	Dipodomys_ordii
ENSMMUG00000039415	-	100	81.046	ENSDORG00000005955	Snrpc	66	82.119	Dipodomys_ordii
ENSMMUG00000039415	-	98	94.872	ENSETEG00000008268	-	100	94.872	Echinops_telfairi
ENSMMUG00000039415	-	98	91.026	ENSETEG00000011265	-	100	91.026	Echinops_telfairi
ENSMMUG00000039415	-	55	95.181	ENSETEG00000008756	-	75	94.805	Echinops_telfairi
ENSMMUG00000039415	-	100	98.742	ENSEASG00005021007	SNRPC	100	98.742	Equus_asinus_asinus
ENSMMUG00000039415	-	100	98.742	ENSECAG00000026848	SNRPC	100	98.742	Equus_caballus
ENSMMUG00000039415	-	99	78.481	ENSEEUG00000014633	SNRPC	90	78.481	Erinaceus_europaeus
ENSMMUG00000039415	-	100	77.358	ENSELUG00000000815	SNRPC	100	77.358	Esox_lucius
ENSMMUG00000039415	-	100	98.742	ENSFCAG00000044077	-	100	98.742	Felis_catus
ENSMMUG00000039415	-	100	91.824	ENSFCAG00000031775	-	88	91.824	Felis_catus
ENSMMUG00000039415	-	100	97.484	ENSFALG00000003756	SNRPC	100	97.484	Ficedula_albicollis
ENSMMUG00000039415	-	100	98.742	ENSFDAG00000018111	SNRPC	100	98.742	Fukomys_damarensis
ENSMMUG00000039415	-	100	95.625	ENSGALG00000002773	SNRPC	100	95.625	Gallus_gallus
ENSMMUG00000039415	-	100	96.226	ENSGAGG00000003063	SNRPC	100	96.226	Gopherus_agassizii
ENSMMUG00000039415	-	100	98.742	ENSGGOG00000012499	SNRPC	100	98.742	Gorilla_gorilla
ENSMMUG00000039415	-	100	79.874	ENSHGLG00000017741	-	100	77.358	Heterocephalus_glaber_female
ENSMMUG00000039415	-	100	98.742	ENSHGLG00000013981	SNRPC	100	98.742	Heterocephalus_glaber_female
ENSMMUG00000039415	-	78	81.197	ENSHGLG00000005871	-	100	78.000	Heterocephalus_glaber_female
ENSMMUG00000039415	-	100	93.711	ENSHGLG00100017764	-	100	93.711	Heterocephalus_glaber_male
ENSMMUG00000039415	-	100	79.874	ENSHGLG00100010786	-	100	77.358	Heterocephalus_glaber_male
ENSMMUG00000039415	-	100	98.742	ENSHGLG00100009478	SNRPC	100	98.742	Heterocephalus_glaber_male
ENSMMUG00000039415	-	100	84.277	ENSIPUG00000024851	snrpc	100	84.277	Ictalurus_punctatus
ENSMMUG00000039415	-	100	98.742	ENSSTOG00000013786	SNRPC	100	98.742	Ictidomys_tridecemlineatus
ENSMMUG00000039415	-	100	98.113	ENSJJAG00000021741	Snrpc	100	98.113	Jaculus_jaculus
ENSMMUG00000039415	-	100	86.875	ENSLACG00000013753	SNRPC	88	89.873	Latimeria_chalumnae
ENSMMUG00000039415	-	100	98.742	ENSLAFG00000013534	SNRPC	100	98.742	Loxodonta_africana
ENSMMUG00000039415	-	100	98.742	ENSMFAG00000031764	-	100	98.742	Macaca_fascicularis
ENSMMUG00000039415	-	100	98.113	ENSMFAG00000030525	-	100	98.113	Macaca_fascicularis
ENSMMUG00000039415	-	100	98.742	ENSMNEG00000032731	SNRPC	100	98.742	Macaca_nemestrina
ENSMMUG00000039415	-	100	98.742	ENSMLEG00000033916	-	100	98.742	Mandrillus_leucophaeus
ENSMMUG00000039415	-	97	75.862	ENSMLEG00000039724	-	81	73.793	Mandrillus_leucophaeus
ENSMMUG00000039415	-	97	89.677	ENSMLEG00000040224	-	89	89.677	Mandrillus_leucophaeus
ENSMMUG00000039415	-	100	95.597	ENSMGAG00000006054	SNRPC	100	95.597	Meleagris_gallopavo
ENSMMUG00000039415	-	100	83.648	ENSMICG00000036552	-	87	85.811	Microcebus_murinus
ENSMMUG00000039415	-	100	98.113	ENSMICG00000032183	-	100	98.113	Microcebus_murinus
ENSMMUG00000039415	-	100	98.113	ENSMICG00000007339	-	100	98.113	Microcebus_murinus
ENSMMUG00000039415	-	100	90.667	ENSMICG00000009130	-	100	90.000	Microcebus_murinus
ENSMMUG00000039415	-	100	98.113	ENSMOCG00000017609	Snrpc	100	98.113	Microtus_ochrogaster
ENSMMUG00000039415	-	100	97.484	ENSMODG00000013904	-	100	97.484	Monodelphis_domestica
ENSMMUG00000039415	-	51	88.312	ENSMODG00000025263	-	100	74.214	Monodelphis_domestica
ENSMMUG00000039415	-	100	68.667	ENSMALG00000001197	snrpc	100	70.000	Monopterus_albus
ENSMMUG00000039415	-	100	98.113	MGP_CAROLIEiJ_G0021308	Snrpc	100	98.113	Mus_caroli
ENSMMUG00000039415	-	100	98.113	ENSMUSG00000024217	Snrpc	100	98.113	Mus_musculus
ENSMMUG00000039415	-	74	98.305	MGP_SPRETEiJ_G0022221	-	98	98.305	Mus_spretus
ENSMMUG00000039415	-	100	96.855	ENSMPUG00000003210	SNRPC	100	96.855	Mustela_putorius_furo
ENSMMUG00000039415	-	100	96.855	ENSMLUG00000002488	SNRPC	100	96.855	Myotis_lucifugus
ENSMMUG00000039415	-	100	98.113	ENSNGAG00000019686	Snrpc	100	98.113	Nannospalax_galili
ENSMMUG00000039415	-	100	98.742	ENSNLEG00000034810	SNRPC	100	98.742	Nomascus_leucogenys
ENSMMUG00000039415	-	89	97.887	ENSMEUG00000009300	SNRPC	100	97.887	Notamacropus_eugenii
ENSMMUG00000039415	-	100	98.742	ENSODEG00000020370	-	100	98.742	Octodon_degus
ENSMMUG00000039415	-	100	98.113	ENSODEG00000020201	-	100	98.113	Octodon_degus
ENSMMUG00000039415	-	77	93.496	ENSODEG00000006008	-	93	93.023	Octodon_degus
ENSMMUG00000039415	-	100	98.742	ENSODEG00000018985	-	100	98.742	Octodon_degus
ENSMMUG00000039415	-	100	98.742	ENSODEG00000017080	-	100	98.742	Octodon_degus
ENSMMUG00000039415	-	100	97.484	ENSODEG00000019633	-	100	97.484	Octodon_degus
ENSMMUG00000039415	-	91	93.919	ENSOANG00000003405	SNRPC	100	93.919	Ornithorhynchus_anatinus
ENSMMUG00000039415	-	100	97.484	ENSOCUG00000026430	-	99	97.484	Oryctolagus_cuniculus
ENSMMUG00000039415	-	100	96.226	ENSOCUG00000023292	-	100	96.226	Oryctolagus_cuniculus
ENSMMUG00000039415	-	100	98.742	ENSOCUG00000026668	-	100	98.742	Oryctolagus_cuniculus
ENSMMUG00000039415	-	99	98.089	ENSOGAG00000008755	-	88	98.089	Otolemur_garnettii
ENSMMUG00000039415	-	97	83.117	ENSOGAG00000028405	-	99	80.519	Otolemur_garnettii
ENSMMUG00000039415	-	100	96.855	ENSOGAG00000026269	-	100	96.855	Otolemur_garnettii
ENSMMUG00000039415	-	100	98.742	ENSOARG00000010823	SNRPC	100	98.742	Ovis_aries
ENSMMUG00000039415	-	100	98.742	ENSPPAG00000043871	SNRPC	100	98.742	Pan_paniscus
ENSMMUG00000039415	-	100	62.264	ENSPPRG00000010967	-	89	50.667	Panthera_pardus
ENSMMUG00000039415	-	96	59.091	ENSPPRG00000016017	-	86	58.170	Panthera_pardus
ENSMMUG00000039415	-	100	98.742	ENSPPRG00000008647	-	100	98.742	Panthera_pardus
ENSMMUG00000039415	-	97	61.644	ENSPTIG00000013329	-	50	81.818	Panthera_tigris_altaica
ENSMMUG00000039415	-	100	98.742	ENSPTIG00000021867	-	100	98.742	Panthera_tigris_altaica
ENSMMUG00000039415	-	100	98.742	ENSPTRG00000018070	SNRPC	100	98.742	Pan_troglodytes
ENSMMUG00000039415	-	100	87.421	ENSPANG00000018228	-	94	87.421	Papio_anubis
ENSMMUG00000039415	-	100	98.742	ENSPANG00000022802	-	100	98.742	Papio_anubis
ENSMMUG00000039415	-	100	81.875	ENSPKIG00000001671	SNRPC	100	79.874	Paramormyrops_kingsleyae
ENSMMUG00000039415	-	63	86.170	ENSPKIG00000003136	snrpc	100	72.258	Paramormyrops_kingsleyae
ENSMMUG00000039415	-	99	94.904	ENSPSIG00000004876	SNRPC	77	94.904	Pelodiscus_sinensis
ENSMMUG00000039415	-	98	67.347	ENSPMGG00000022162	snrpc	100	65.772	Periophthalmus_magnuspinnatus
ENSMMUG00000039415	-	100	98.113	ENSPEMG00000010773	Snrpc	100	98.113	Peromyscus_maniculatus_bairdii
ENSMMUG00000039415	-	100	88.742	ENSPEMG00000002763	-	100	85.430	Peromyscus_maniculatus_bairdii
ENSMMUG00000039415	-	99	70.064	ENSPMAG00000000602	snrpc	98	62.745	Petromyzon_marinus
ENSMMUG00000039415	-	99	60.377	ENSPREG00000013017	snrpc	79	57.233	Poecilia_reticulata
ENSMMUG00000039415	-	55	98.795	ENSPPYG00000029902	-	84	98.795	Pongo_abelii
ENSMMUG00000039415	-	99	98.089	ENSPCAG00000016885	SNRPC	90	98.089	Procavia_capensis
ENSMMUG00000039415	-	100	98.742	ENSPCOG00000004904	SNRPC	100	98.742	Propithecus_coquereli
ENSMMUG00000039415	-	99	97.452	ENSPVAG00000015597	SNRPC	87	97.452	Pteropus_vampyrus
ENSMMUG00000039415	-	100	77.987	ENSPNAG00000012799	snrpc	100	78.481	Pygocentrus_nattereri
ENSMMUG00000039415	-	100	98.113	ENSRNOG00000000493	Snrpc	100	98.113	Rattus_norvegicus
ENSMMUG00000039415	-	100	98.113	ENSRBIG00000014819	-	100	98.113	Rhinopithecus_bieti
ENSMMUG00000039415	-	100	88.050	ENSRBIG00000036353	-	83	88.050	Rhinopithecus_bieti
ENSMMUG00000039415	-	100	98.742	ENSRBIG00000037567	-	100	98.742	Rhinopithecus_bieti
ENSMMUG00000039415	-	100	98.113	ENSRBIG00000022998	-	100	98.113	Rhinopithecus_bieti
ENSMMUG00000039415	-	100	98.742	ENSRROG00000041300	SNRPC	100	98.742	Rhinopithecus_roxellana
ENSMMUG00000039415	-	100	98.742	ENSSBOG00000031528	-	100	98.742	Saimiri_boliviensis_boliviensis
ENSMMUG00000039415	-	98	82.051	ENSSBOG00000023189	-	91	82.051	Saimiri_boliviensis_boliviensis
ENSMMUG00000039415	-	95	81.457	ENSSBOG00000032361	-	100	80.282	Saimiri_boliviensis_boliviensis
ENSMMUG00000039415	-	98	82.313	ENSSBOG00000032882	-	93	80.128	Saimiri_boliviensis_boliviensis
ENSMMUG00000039415	-	99	97.452	ENSSHAG00000000945	-	87	97.452	Sarcophilus_harrisii
ENSMMUG00000039415	-	51	88.312	ENSSHAG00000002972	-	100	74.214	Sarcophilus_harrisii
ENSMMUG00000039415	-	61	84.783	ENSSFOG00015022422	snrpc	82	86.719	Scleropages_formosus
ENSMMUG00000039415	-	100	79.874	ENSSFOG00015019150	snrpc	100	79.874	Scleropages_formosus
ENSMMUG00000039415	-	100	74.843	ENSSARG00000008970	SNRPC	89	74.843	Sorex_araneus
ENSMMUG00000039415	-	100	96.855	ENSSPUG00000002502	SNRPC	100	96.855	Sphenodon_punctatus
ENSMMUG00000039415	-	100	98.742	ENSSSCG00000001531	SNRPC	100	98.742	Sus_scrofa
ENSMMUG00000039415	-	100	96.226	ENSTGUG00000001773	SNRPC	100	96.226	Taeniopygia_guttata
ENSMMUG00000039415	-	100	69.333	ENSTRUG00000021651	snrpc	100	68.667	Takifugu_rubripes
ENSMMUG00000039415	-	89	71.127	ENSTBEG00000016759	-	79	71.127	Tupaia_belangeri
ENSMMUG00000039415	-	98	78.231	ENSTBEG00000015356	-	68	90.625	Tupaia_belangeri
ENSMMUG00000039415	-	98	91.026	ENSTBEG00000013022	-	100	91.026	Tupaia_belangeri
ENSMMUG00000039415	-	100	96.855	ENSTTRG00000007827	SNRPC	87	96.855	Tursiops_truncatus
ENSMMUG00000039415	-	75	98.319	ENSUAMG00000014125	SNRPC	80	98.319	Ursus_americanus
ENSMMUG00000039415	-	100	88.202	ENSUMAG00000010869	SNRPC	100	88.202	Ursus_maritimus
ENSMMUG00000039415	-	89	73.239	ENSVPAG00000003106	SNRPC	79	73.239	Vicugna_pacos
ENSMMUG00000039415	-	100	97.484	ENSVVUG00000021947	-	100	97.484	Vulpes_vulpes
ENSMMUG00000039415	-	97	93.506	ENSVVUG00000010467	-	87	93.590	Vulpes_vulpes
ENSMMUG00000039415	-	100	89.308	ENSXETG00000024721	snrpc	100	89.308	Xenopus_tropicalis