EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000046682 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 2509 bases
Position: chr10:32632109-32634617
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000052069	Smg4_UPF3	PF03467.15	3.2e-35	1	1
ENSMMUP00000044297	Smg4_UPF3	PF03467.15	3.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000062450	-	570	-	ENSMMUP00000052069	189 (aa)	-	A0A1D5QVI9
ENSMMUT00000070287	-	567	-	ENSMMUP00000044297	188 (aa)	-	A0A1D5Q8C9

Gene Model

Click here to download ENSMMUG00000046682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000046682's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000046682	-	94	65.899	ENSMMUG00000020222	UPF3B	97	69.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000046682	-	100	64.629	ENSG00000125351	UPF3B	100	67.686	Homo_sapiens
ENSMMUG00000046682	-	90	55.080	ENSACIG00000020468	upf3a	70	57.018	Amphilophus_citrinellus
ENSMMUG00000046682	-	86	62.032	ENSANAG00000033169	-	75	56.398	Aotus_nancymaae
ENSMMUG00000046682	-	94	61.751	ENSANAG00000025598	-	67	61.712	Aotus_nancymaae
ENSMMUG00000046682	-	83	78.698	ENSANAG00000021894	-	97	68.664	Aotus_nancymaae
ENSMMUG00000046682	-	77	55.975	ENSAMXG00000000199	upf3b	55	53.631	Astyanax_mexicanus
ENSMMUG00000046682	-	94	67.281	ENSBTAG00000035615	UPF3B	71	69.912	Bos_taurus
ENSMMUG00000046682	-	75	55.844	ENSBTAG00000047365	-	66	55.844	Bos_taurus
ENSMMUG00000046682	-	94	65.438	ENSCJAG00000004975	UPF3B	97	68.664	Callithrix_jacchus
ENSMMUG00000046682	-	83	79.290	ENSCHIG00000018011	-	71	69.469	Capra_hircus
ENSMMUG00000046682	-	94	66.820	ENSTSYG00000014690	UPF3B	96	66.816	Carlito_syrichta
ENSMMUG00000046682	-	94	52.151	ENSCCAG00000021964	-	63	53.846	Cebus_capucinus
ENSMMUG00000046682	-	79	67.320	ENSCCAG00000029813	-	75	56.019	Cebus_capucinus
ENSMMUG00000046682	-	94	65.899	ENSCATG00000017506	UPF3B	97	69.124	Cercocebus_atys
ENSMMUG00000046682	-	56	57.018	ENSCPBG00000022854	-	80	57.018	Chrysemys_picta_bellii
ENSMMUG00000046682	-	88	39.560	ENSCING00000008396	-	88	42.667	Ciona_intestinalis
ENSMMUG00000046682	-	94	65.899	ENSCANG00000029220	UPF3B	68	69.912	Colobus_angolensis_palliatus
ENSMMUG00000046682	-	94	64.055	ENSCGRG00001013643	-	59	65.044	Cricetulus_griseus_chok1gshd
ENSMMUG00000046682	-	68	51.095	ENSFHEG00000010418	upf3a	70	51.095	Fundulus_heteroclitus
ENSMMUG00000046682	-	81	57.831	ENSGMOG00000019615	upf3a	52	58.101	Gadus_morhua
ENSMMUG00000046682	-	76	60.645	ENSGALG00000016815	-	69	60.645	Gallus_gallus
ENSMMUG00000046682	-	94	56.931	ENSGACG00000017435	upf3b	74	58.294	Gasterosteus_aculeatus
ENSMMUG00000046682	-	81	58.434	ENSGACG00000001972	upf3a	53	58.659	Gasterosteus_aculeatus
ENSMMUG00000046682	-	80	56.024	ENSGAGG00000001952	UPF3A	89	56.024	Gopherus_agassizii
ENSMMUG00000046682	-	94	65.899	ENSGGOG00000023995	UPF3B	80	64.458	Gorilla_gorilla
ENSMMUG00000046682	-	83	58.580	ENSHCOG00000013985	upf3a	68	58.580	Hippocampus_comes
ENSMMUG00000046682	-	81	51.205	ENSSTOG00000030282	-	67	51.190	Ictidomys_tridecemlineatus
ENSMMUG00000046682	-	76	52.903	ENSJJAG00000018099	-	74	51.205	Jaculus_jaculus
ENSMMUG00000046682	-	94	65.899	ENSMFAG00000045414	UPF3B	97	69.124	Macaca_fascicularis
ENSMMUG00000046682	-	100	91.710	ENSMFAG00000045275	-	100	91.710	Macaca_fascicularis
ENSMMUG00000046682	-	94	65.899	ENSMNEG00000039794	UPF3B	97	69.124	Macaca_nemestrina
ENSMMUG00000046682	-	100	91.192	ENSMNEG00000040898	-	100	91.192	Macaca_nemestrina
ENSMMUG00000046682	-	94	65.899	ENSMLEG00000010999	UPF3B	97	69.124	Mandrillus_leucophaeus
ENSMMUG00000046682	-	94	67.281	ENSMICG00000001743	UPF3B	68	70.354	Microcebus_murinus
ENSMMUG00000046682	-	83	53.846	ENSMOCG00000000550	Upf3a	52	52.821	Microtus_ochrogaster
ENSMMUG00000046682	-	56	58.772	ENSMALG00000002454	-	58	58.772	Monopterus_albus
ENSMMUG00000046682	-	92	52.261	ENSNBRG00000011560	upf3b	95	54.730	Neolamprologus_brichardi
ENSMMUG00000046682	-	83	78.698	ENSNLEG00000014897	UPF3B	71	68.310	Nomascus_leucogenys
ENSMMUG00000046682	-	99	72.195	ENSNLEG00000027516	-	99	73.171	Nomascus_leucogenys
ENSMMUG00000046682	-	94	67.742	ENSODEG00000002186	-	51	68.584	Octodon_degus
ENSMMUG00000046682	-	98	55.217	ENSODEG00000007164	-	95	53.043	Octodon_degus
ENSMMUG00000046682	-	76	54.839	ENSODEG00000009176	-	58	54.839	Octodon_degus
ENSMMUG00000046682	-	100	54.950	ENSODEG00000000596	-	100	52.970	Octodon_degus
ENSMMUG00000046682	-	97	61.194	ENSODEG00000006064	-	97	61.194	Octodon_degus
ENSMMUG00000046682	-	94	65.899	ENSPPAG00000040390	UPF3B	80	64.458	Pan_paniscus
ENSMMUG00000046682	-	94	66.820	ENSPTIG00000015264	UPF3B	68	69.027	Panthera_tigris_altaica
ENSMMUG00000046682	-	94	65.899	ENSPTRG00000022228	UPF3B	80	64.458	Pan_troglodytes
ENSMMUG00000046682	-	94	65.899	ENSPANG00000000900	UPF3B	97	69.124	Papio_anubis
ENSMMUG00000046682	-	99	92.632	ENSPANG00000029350	-	99	92.632	Papio_anubis
ENSMMUG00000046682	-	84	63.529	ENSPKIG00000019226	upf3b	67	61.947	Paramormyrops_kingsleyae
ENSMMUG00000046682	-	94	55.941	ENSPMGG00000016067	upf3b	73	56.398	Periophthalmus_magnuspinnatus
ENSMMUG00000046682	-	88	54.645	ENSPCIG00000019590	-	69	54.819	Phascolarctos_cinereus
ENSMMUG00000046682	-	83	57.738	ENSPLAG00000011960	upf3a	63	50.847	Poecilia_latipinna
ENSMMUG00000046682	-	58	60.169	ENSPREG00000012214	upf3b	95	54.305	Poecilia_reticulata
ENSMMUG00000046682	-	69	51.449	ENSPREG00000005566	upf3a	75	51.449	Poecilia_reticulata
ENSMMUG00000046682	-	94	65.899	ENSPPYG00000020675	-	66	69.912	Pongo_abelii
ENSMMUG00000046682	-	94	66.820	ENSPCOG00000021960	UPF3B	68	69.912	Propithecus_coquereli
ENSMMUG00000046682	-	83	61.905	ENSPNAG00000021528	upf3b	56	62.147	Pygocentrus_nattereri
ENSMMUG00000046682	-	94	65.899	ENSRROG00000041031	UPF3B	97	69.124	Rhinopithecus_roxellana
ENSMMUG00000046682	-	83	78.698	ENSSBOG00000019740	UPF3B	99	68.203	Saimiri_boliviensis_boliviensis
ENSMMUG00000046682	-	83	57.988	ENSSMAG00000003858	upf3a	72	55.556	Scophthalmus_maximus
ENSMMUG00000046682	-	84	63.158	ENSSMAG00000012913	upf3b	55	63.483	Scophthalmus_maximus
ENSMMUG00000046682	-	83	57.988	ENSSDUG00000009680	upf3a	67	50.847	Seriola_dumerili
ENSMMUG00000046682	-	87	54.802	ENSSPAG00000007938	upf3a	76	55.429	Stegastes_partitus
ENSMMUG00000046682	-	94	67.281	ENSVVUG00000011594	UPF3B	97	68.664	Vulpes_vulpes
ENSMMUG00000046682	-	85	65.698	ENSXETG00000007440	upf3b	88	60.849	Xenopus_tropicalis
ENSMMUG00000046682	-	84	61.628	ENSXCOG00000016586	upf3b	98	57.073	Xiphophorus_couchianus