EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000048039 (Gene tree)
Gene ID: 702757
Gene Symbol: APEX1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 6184 bases
Position: chr7:81672074-81678257
Accession: 702757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000044871	Exo_endo_phos	PF03372.23	7.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000055046	-	5168	XM_015143085	ENSMMUP00000044871	318 (aa)	XP_014998571	F7GIK6
ENSMMUT00000062482	-	45	-	ENSMMUP00000060604	14 (aa)	-	A0A1D5RJW0

Gene Model

Click here to download ENSMMUG00000048039's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000048039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000048039	APEX1	100	98.113	ENSG00000100823	APEX1	100	98.113	Homo_sapiens
ENSMMUG00000048039	APEX1	88	69.176	ENSAPOG00000017002	apex1	94	68.166	Acanthochromis_polyacanthus
ENSMMUG00000048039	APEX1	100	95.283	ENSAMEG00000005418	APEX1	100	95.283	Ailuropoda_melanoleuca
ENSMMUG00000048039	APEX1	87	70.863	ENSACIG00000010653	apex1	98	70.000	Amphilophus_citrinellus
ENSMMUG00000048039	APEX1	88	69.176	ENSAOCG00000009649	apex1	93	68.166	Amphiprion_ocellaris
ENSMMUG00000048039	APEX1	88	69.176	ENSAPEG00000021453	apex1	93	68.166	Amphiprion_percula
ENSMMUG00000048039	APEX1	86	70.803	ENSATEG00000002883	apex1	97	66.456	Anabas_testudineus
ENSMMUG00000048039	APEX1	100	69.876	ENSACAG00000008099	APEX1	100	69.876	Anolis_carolinensis
ENSMMUG00000048039	APEX1	100	97.484	ENSANAG00000030117	APEX1	100	97.484	Aotus_nancymaae
ENSMMUG00000048039	APEX1	86	71.636	ENSACLG00000018441	apex1	99	66.456	Astatotilapia_calliptera
ENSMMUG00000048039	APEX1	100	65.312	ENSAMXG00000034699	apex1	100	65.312	Astyanax_mexicanus
ENSMMUG00000048039	APEX1	100	93.396	ENSBTAG00000002745	APEX1	100	93.396	Bos_taurus
ENSMMUG00000048039	APEX1	80	44.531	WBGene00001372	exo-3	88	44.531	Caenorhabditis_elegans
ENSMMUG00000048039	APEX1	100	97.799	ENSCJAG00000009726	APEX1	100	97.799	Callithrix_jacchus
ENSMMUG00000048039	APEX1	100	94.340	ENSCAFG00000032033	APEX1	100	94.340	Canis_familiaris
ENSMMUG00000048039	APEX1	100	94.340	ENSCAFG00020014377	-	100	94.340	Canis_lupus_dingo
ENSMMUG00000048039	APEX1	54	90.116	ENSCAFG00020023002	-	96	90.116	Canis_lupus_dingo
ENSMMUG00000048039	APEX1	100	92.767	ENSCHIG00000007298	-	100	92.767	Capra_hircus
ENSMMUG00000048039	APEX1	98	74.359	ENSCHIG00000014537	-	99	74.359	Capra_hircus
ENSMMUG00000048039	APEX1	100	94.340	ENSTSYG00000034813	APEX1	100	94.340	Carlito_syrichta
ENSMMUG00000048039	APEX1	85	88.192	ENSCAPG00000016235	APEX1	91	97.034	Cavia_aperea
ENSMMUG00000048039	APEX1	100	94.025	ENSCPOG00000030909	APEX1	100	94.025	Cavia_porcellus
ENSMMUG00000048039	APEX1	100	97.799	ENSCCAG00000033056	-	100	97.799	Cebus_capucinus
ENSMMUG00000048039	APEX1	100	84.591	ENSCCAG00000031931	-	100	84.591	Cebus_capucinus
ENSMMUG00000048039	APEX1	100	99.686	ENSCATG00000015580	APEX1	100	99.686	Cercocebus_atys
ENSMMUG00000048039	APEX1	100	94.969	ENSCLAG00000001002	APEX1	100	94.969	Chinchilla_lanigera
ENSMMUG00000048039	APEX1	100	99.371	ENSCSAG00000016670	-	100	99.371	Chlorocebus_sabaeus
ENSMMUG00000048039	APEX1	100	99.371	ENSCSAG00000016685	-	100	99.371	Chlorocebus_sabaeus
ENSMMUG00000048039	APEX1	100	72.100	ENSCPBG00000009567	APEX1	100	72.100	Chrysemys_picta_bellii
ENSMMUG00000048039	APEX1	91	54.915	ENSCING00000008137	-	94	54.915	Ciona_intestinalis
ENSMMUG00000048039	APEX1	92	49.153	ENSCSAVG00000007144	-	100	52.896	Ciona_savignyi
ENSMMUG00000048039	APEX1	100	99.057	ENSCANG00000030726	APEX1	100	99.057	Colobus_angolensis_palliatus
ENSMMUG00000048039	APEX1	100	91.824	ENSCGRG00001017046	Apex1	100	91.824	Cricetulus_griseus_chok1gshd
ENSMMUG00000048039	APEX1	100	91.824	ENSCGRG00000008984	Apex1	100	91.824	Cricetulus_griseus_crigri
ENSMMUG00000048039	APEX1	99	64.780	ENSCSEG00000017499	apex1	99	64.780	Cynoglossus_semilaevis
ENSMMUG00000048039	APEX1	88	70.609	ENSCVAG00000022075	apex1	99	65.506	Cyprinodon_variegatus
ENSMMUG00000048039	APEX1	100	65.409	ENSDARG00000045843	apex1	100	65.409	Danio_rerio
ENSMMUG00000048039	APEX1	100	89.308	ENSDNOG00000042234	APEX1	95	89.308	Dasypus_novemcinctus
ENSMMUG00000048039	APEX1	100	94.025	ENSDORG00000001616	Apex1	100	94.025	Dipodomys_ordii
ENSMMUG00000048039	APEX1	100	93.396	ENSETEG00000004855	-	100	93.396	Echinops_telfairi
ENSMMUG00000048039	APEX1	75	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSMMUG00000048039	APEX1	100	95.912	ENSEASG00005017489	APEX1	74	95.912	Equus_asinus_asinus
ENSMMUG00000048039	APEX1	100	95.912	ENSECAG00000022325	APEX1	82	95.912	Equus_caballus
ENSMMUG00000048039	APEX1	91	93.056	ENSEEUG00000012569	APEX1	100	93.056	Erinaceus_europaeus
ENSMMUG00000048039	APEX1	100	64.890	ENSELUG00000021706	apex1	100	64.890	Esox_lucius
ENSMMUG00000048039	APEX1	100	95.912	ENSFCAG00000030869	APEX1	100	95.912	Felis_catus
ENSMMUG00000048039	APEX1	100	93.082	ENSFDAG00000006120	APEX1	100	93.082	Fukomys_damarensis
ENSMMUG00000048039	APEX1	99	67.089	ENSFHEG00000009031	apex1	83	67.089	Fundulus_heteroclitus
ENSMMUG00000048039	APEX1	99	62.579	ENSGMOG00000007943	apex1	99	62.579	Gadus_morhua
ENSMMUG00000048039	APEX1	99	66.772	ENSGAFG00000005311	apex1	99	66.772	Gambusia_affinis
ENSMMUG00000048039	APEX1	99	64.557	ENSGACG00000019497	apex1	99	68.797	Gasterosteus_aculeatus
ENSMMUG00000048039	APEX1	100	71.473	ENSGAGG00000014999	APEX1	100	71.473	Gopherus_agassizii
ENSMMUG00000048039	APEX1	100	98.428	ENSGGOG00000002128	APEX1	100	98.428	Gorilla_gorilla
ENSMMUG00000048039	APEX1	99	66.139	ENSHBUG00000005894	apex1	99	66.139	Haplochromis_burtoni
ENSMMUG00000048039	APEX1	100	94.025	ENSHGLG00000002848	APEX1	100	94.025	Heterocephalus_glaber_female
ENSMMUG00000048039	APEX1	100	94.025	ENSHGLG00100017878	APEX1	100	94.025	Heterocephalus_glaber_male
ENSMMUG00000048039	APEX1	99	65.831	ENSHCOG00000009961	apex1	99	65.831	Hippocampus_comes
ENSMMUG00000048039	APEX1	100	67.398	ENSIPUG00000005799	apex1	100	67.398	Ictalurus_punctatus
ENSMMUG00000048039	APEX1	100	93.711	ENSSTOG00000010096	APEX1	100	93.711	Ictidomys_tridecemlineatus
ENSMMUG00000048039	APEX1	100	83.962	ENSJJAG00000003660	-	100	83.962	Jaculus_jaculus
ENSMMUG00000048039	APEX1	100	79.874	ENSJJAG00000020465	-	96	83.893	Jaculus_jaculus
ENSMMUG00000048039	APEX1	100	93.711	ENSJJAG00000012067	-	100	93.711	Jaculus_jaculus
ENSMMUG00000048039	APEX1	88	70.968	ENSKMAG00000021171	apex1	99	65.823	Kryptolebias_marmoratus
ENSMMUG00000048039	APEX1	88	68.100	ENSLBEG00000010248	apex1	99	63.898	Labrus_bergylta
ENSMMUG00000048039	APEX1	100	66.667	ENSLACG00000008617	APEX1	100	66.667	Latimeria_chalumnae
ENSMMUG00000048039	APEX1	100	66.667	ENSLOCG00000015516	apex1	99	66.667	Lepisosteus_oculatus
ENSMMUG00000048039	APEX1	100	93.711	ENSLAFG00000021872	APEX1	100	93.711	Loxodonta_africana
ENSMMUG00000048039	APEX1	100	99.686	ENSMFAG00000002565	APEX1	100	99.686	Macaca_fascicularis
ENSMMUG00000048039	APEX1	100	100.000	ENSMNEG00000036944	APEX1	100	100.000	Macaca_nemestrina
ENSMMUG00000048039	APEX1	100	99.686	ENSMLEG00000042125	APEX1	100	99.686	Mandrillus_leucophaeus
ENSMMUG00000048039	APEX1	88	70.968	ENSMAMG00000023526	apex1	99	66.139	Mastacembelus_armatus
ENSMMUG00000048039	APEX1	86	71.636	ENSMZEG00005014187	apex1	99	66.456	Maylandia_zebra
ENSMMUG00000048039	APEX1	100	92.767	ENSMAUG00000013994	Apex1	100	92.767	Mesocricetus_auratus
ENSMMUG00000048039	APEX1	100	95.283	ENSMICG00000043554	APEX1	100	95.283	Microcebus_murinus
ENSMMUG00000048039	APEX1	100	91.509	ENSMOCG00000013721	Apex1	100	91.509	Microtus_ochrogaster
ENSMMUG00000048039	APEX1	88	67.143	ENSMMOG00000010031	apex1	97	62.696	Mola_mola
ENSMMUG00000048039	APEX1	100	83.125	ENSMODG00000007125	APEX1	100	84.783	Monodelphis_domestica
ENSMMUG00000048039	APEX1	88	63.799	ENSMALG00000011699	apex1	79	62.457	Monopterus_albus
ENSMMUG00000048039	APEX1	99	93.375	MGP_CAROLIEiJ_G0019209	Apex1	99	93.375	Mus_caroli
ENSMMUG00000048039	APEX1	100	94.025	ENSMUSG00000035960	Apex1	100	94.025	Mus_musculus
ENSMMUG00000048039	APEX1	100	94.025	MGP_PahariEiJ_G0030232	Apex1	100	94.025	Mus_pahari
ENSMMUG00000048039	APEX1	100	94.025	MGP_SPRETEiJ_G0020101	Apex1	100	94.025	Mus_spretus
ENSMMUG00000048039	APEX1	100	93.750	ENSMLUG00000028957	APEX1	100	93.750	Myotis_lucifugus
ENSMMUG00000048039	APEX1	100	92.767	ENSNGAG00000002725	-	100	92.767	Nannospalax_galili
ENSMMUG00000048039	APEX1	100	69.811	ENSNGAG00000021748	-	99	69.811	Nannospalax_galili
ENSMMUG00000048039	APEX1	86	71.636	ENSNBRG00000005334	apex1	91	66.456	Neolamprologus_brichardi
ENSMMUG00000048039	APEX1	100	98.113	ENSNLEG00000010839	APEX1	100	98.113	Nomascus_leucogenys
ENSMMUG00000048039	APEX1	100	86.792	ENSMEUG00000014519	APEX1	100	86.792	Notamacropus_eugenii
ENSMMUG00000048039	APEX1	100	93.082	ENSOPRG00000014029	APEX1	100	93.082	Ochotona_princeps
ENSMMUG00000048039	APEX1	100	94.340	ENSODEG00000001703	-	100	94.340	Octodon_degus
ENSMMUG00000048039	APEX1	100	71.914	ENSODEG00000006583	-	100	71.914	Octodon_degus
ENSMMUG00000048039	APEX1	97	74.757	ENSODEG00000004777	-	99	74.757	Octodon_degus
ENSMMUG00000048039	APEX1	87	71.583	ENSONIG00000012089	apex1	99	66.772	Oreochromis_niloticus
ENSMMUG00000048039	APEX1	90	82.456	ENSOANG00000008836	APEX1	80	78.395	Ornithorhynchus_anatinus
ENSMMUG00000048039	APEX1	100	94.340	ENSOCUG00000005022	APEX1	100	94.340	Oryctolagus_cuniculus
ENSMMUG00000048039	APEX1	99	66.352	ENSORLG00000012378	apex1	99	65.732	Oryzias_latipes
ENSMMUG00000048039	APEX1	99	66.352	ENSORLG00020021371	apex1	99	65.732	Oryzias_latipes_hni
ENSMMUG00000048039	APEX1	99	66.352	ENSORLG00015020089	apex1	99	65.732	Oryzias_latipes_hsok
ENSMMUG00000048039	APEX1	99	66.352	ENSOMEG00000018876	apex1	99	66.352	Oryzias_melastigma
ENSMMUG00000048039	APEX1	100	94.654	ENSOGAG00000013335	-	100	94.654	Otolemur_garnettii
ENSMMUG00000048039	APEX1	98	83.974	ENSOGAG00000029355	-	100	83.974	Otolemur_garnettii
ENSMMUG00000048039	APEX1	100	91.824	ENSOARG00000019740	-	100	91.824	Ovis_aries
ENSMMUG00000048039	APEX1	97	88.961	ENSOARG00000001876	-	100	88.961	Ovis_aries
ENSMMUG00000048039	APEX1	99	77.848	ENSOARG00000014424	-	100	77.848	Ovis_aries
ENSMMUG00000048039	APEX1	100	98.428	ENSPPAG00000038760	APEX1	100	98.428	Pan_paniscus
ENSMMUG00000048039	APEX1	100	95.912	ENSPPRG00000011794	APEX1	100	95.912	Panthera_pardus
ENSMMUG00000048039	APEX1	100	95.912	ENSPTIG00000014829	APEX1	100	95.912	Panthera_tigris_altaica
ENSMMUG00000048039	APEX1	100	98.428	ENSPTRG00000006093	APEX1	100	98.428	Pan_troglodytes
ENSMMUG00000048039	APEX1	100	99.686	ENSPANG00000022757	APEX1	100	99.686	Papio_anubis
ENSMMUG00000048039	APEX1	87	68.231	ENSPKIG00000003504	apex1	100	64.486	Paramormyrops_kingsleyae
ENSMMUG00000048039	APEX1	76	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSMMUG00000048039	APEX1	100	93.396	ENSPEMG00000019097	Apex1	100	93.396	Peromyscus_maniculatus_bairdii
ENSMMUG00000048039	APEX1	94	66.000	ENSPMAG00000007275	-	99	66.000	Petromyzon_marinus
ENSMMUG00000048039	APEX1	100	83.699	ENSPCIG00000023274	APEX1	100	84.735	Phascolarctos_cinereus
ENSMMUG00000048039	APEX1	88	71.685	ENSPFOG00000004178	apex1	99	66.772	Poecilia_formosa
ENSMMUG00000048039	APEX1	88	71.326	ENSPLAG00000012779	apex1	99	66.456	Poecilia_latipinna
ENSMMUG00000048039	APEX1	88	71.685	ENSPMEG00000019623	apex1	99	66.772	Poecilia_mexicana
ENSMMUG00000048039	APEX1	88	70.968	ENSPREG00000014298	apex1	99	66.139	Poecilia_reticulata
ENSMMUG00000048039	APEX1	100	98.113	ENSPPYG00000005565	APEX1	100	98.113	Pongo_abelii
ENSMMUG00000048039	APEX1	100	92.138	ENSPCAG00000010376	APEX1	100	92.138	Procavia_capensis
ENSMMUG00000048039	APEX1	100	95.283	ENSPCOG00000021564	APEX1	100	95.283	Propithecus_coquereli
ENSMMUG00000048039	APEX1	100	95.000	ENSPVAG00000010736	APEX1	100	95.000	Pteropus_vampyrus
ENSMMUG00000048039	APEX1	86	71.636	ENSPNYG00000023940	apex1	99	66.456	Pundamilia_nyererei
ENSMMUG00000048039	APEX1	93	65.203	ENSPNAG00000020897	apex1	96	65.085	Pygocentrus_nattereri
ENSMMUG00000048039	APEX1	100	93.082	ENSRNOG00000009663	Apex1	100	93.082	Rattus_norvegicus
ENSMMUG00000048039	APEX1	100	99.057	ENSRBIG00000038325	APEX1	99	99.057	Rhinopithecus_bieti
ENSMMUG00000048039	APEX1	100	97.484	ENSSBOG00000018921	-	100	97.484	Saimiri_boliviensis_boliviensis
ENSMMUG00000048039	APEX1	100	82.390	ENSSBOG00000031372	-	100	82.390	Saimiri_boliviensis_boliviensis
ENSMMUG00000048039	APEX1	100	83.333	ENSSHAG00000013524	APEX1	100	84.356	Sarcophilus_harrisii
ENSMMUG00000048039	APEX1	87	66.065	ENSSFOG00015001948	apex1	100	61.950	Scleropages_formosus
ENSMMUG00000048039	APEX1	87	69.065	ENSSMAG00000013348	apex1	99	64.984	Scophthalmus_maximus
ENSMMUG00000048039	APEX1	88	69.176	ENSSDUG00000016377	apex1	99	64.557	Seriola_dumerili
ENSMMUG00000048039	APEX1	88	70.609	ENSSLDG00000023005	apex1	99	65.823	Seriola_lalandi_dorsalis
ENSMMUG00000048039	APEX1	93	71.186	ENSSPUG00000000531	APEX1	99	71.186	Sphenodon_punctatus
ENSMMUG00000048039	APEX1	88	69.892	ENSSPAG00000000458	apex1	96	67.918	Stegastes_partitus
ENSMMUG00000048039	APEX1	100	94.025	ENSSSCG00000040060	-	100	94.025	Sus_scrofa
ENSMMUG00000048039	APEX1	96	56.129	ENSSSCG00000039705	-	99	57.616	Sus_scrofa
ENSMMUG00000048039	APEX1	74	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSMMUG00000048039	APEX1	87	67.986	ENSTRUG00000004268	apex1	95	64.241	Takifugu_rubripes
ENSMMUG00000048039	APEX1	99	62.975	ENSTNIG00000005778	apex1	99	62.975	Tetraodon_nigroviridis
ENSMMUG00000048039	APEX1	100	91.509	ENSTBEG00000006405	APEX1	100	91.509	Tupaia_belangeri
ENSMMUG00000048039	APEX1	74	94.915	ENSTTRG00000007860	APEX1	100	94.915	Tursiops_truncatus
ENSMMUG00000048039	APEX1	100	94.969	ENSUAMG00000010457	APEX1	100	94.969	Ursus_americanus
ENSMMUG00000048039	APEX1	100	94.969	ENSUMAG00000009178	APEX1	100	94.969	Ursus_maritimus
ENSMMUG00000048039	APEX1	74	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSMMUG00000048039	APEX1	100	94.025	ENSVVUG00000009010	APEX1	100	94.025	Vulpes_vulpes
ENSMMUG00000048039	APEX1	100	64.087	ENSXETG00000024773	apex1	100	66.254	Xenopus_tropicalis
ENSMMUG00000048039	APEX1	88	71.326	ENSXCOG00000015233	apex1	99	66.456	Xiphophorus_couchianus
ENSMMUG00000048039	APEX1	88	71.326	ENSXMAG00000006195	apex1	99	66.456	Xiphophorus_maculatus