EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000001728 (Gene tree)
Gene ID: 105473767
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 27949 bases
Position: chrKQ004719.1:8669633-8697581
Accession: 105473767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000000432	ResIII	PF04851.15	2.8e-08	1	1
ENSMNEP00000000431	ResIII	PF04851.15	3e-08	1	1
ENSMNEP00000000430	ResIII	PF04851.15	3.1e-08	1	1
ENSMNEP00000000410	ResIII	PF04851.15	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000002222	CHD3-202	7505	XM_011727754	ENSMNEP00000000430	2000 (aa)	XP_011726056	A0A2K6AMP3
ENSMNET00000002290	CHD3-205	1161	-	ENSMNEP00000000439	386 (aa)	-	A0A2K6AMQ4
ENSMNET00000002259	CHD3-204	5475	XM_011727861	ENSMNEP00000000432	1824 (aa)	XP_011726163	A0A2K6AMP5
ENSMNET00000002237	CHD3-203	7403	XM_011727777	ENSMNEP00000000431	1966 (aa)	XP_011726079	A0A2K6AMQ5
ENSMNET00000002139	CHD3-201	6090	-	ENSMNEP00000000410	2029 (aa)	-	A0A2K6AMM4

Gene Model

Click here to download ENSMNEG00000001728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000001728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000001728	CHD3	50	37.134	ENSMNEG00000040847	CHD6	88	42.885
ENSMNEG00000001728	CHD3	95	69.065	ENSMNEG00000044776	-	96	68.314
ENSMNEG00000001728	CHD3	98	68.429	ENSMNEG00000040044	CHD5	97	68.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000001728	CHD3	100	99.644	ENSG00000170004	CHD3	100	99.644	Homo_sapiens
ENSMNEG00000001728	CHD3	86	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSMNEG00000001728	CHD3	74	96.408	ENSAMEG00000003025	-	100	97.141	Ailuropoda_melanoleuca
ENSMNEG00000001728	CHD3	87	83.516	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSMNEG00000001728	CHD3	91	81.100	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSMNEG00000001728	CHD3	91	80.756	ENSAPEG00000006341	chd3	95	77.728	Amphiprion_percula
ENSMNEG00000001728	CHD3	99	73.950	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSMNEG00000001728	CHD3	99	84.894	ENSACAG00000004276	CHD3	96	84.677	Anolis_carolinensis
ENSMNEG00000001728	CHD3	99	98.798	ENSANAG00000034323	CHD3	99	99.200	Aotus_nancymaae
ENSMNEG00000001728	CHD3	94	78.816	ENSACLG00000009222	chd3	99	74.699	Astatotilapia_calliptera
ENSMNEG00000001728	CHD3	99	97.653	ENSBTAG00000014377	CHD3	97	98.229	Bos_taurus
ENSMNEG00000001728	CHD3	99	99.236	ENSCJAG00000014766	CHD3	99	99.236	Callithrix_jacchus
ENSMNEG00000001728	CHD3	100	97.751	ENSCAFG00000016859	CHD3	100	97.751	Canis_familiaris
ENSMNEG00000001728	CHD3	99	97.706	ENSCAFG00020007422	CHD3	100	98.254	Canis_lupus_dingo
ENSMNEG00000001728	CHD3	99	98.484	ENSCHIG00000016737	CHD3	100	98.484	Capra_hircus
ENSMNEG00000001728	CHD3	100	98.882	ENSTSYG00000035658	CHD3	100	98.882	Carlito_syrichta
ENSMNEG00000001728	CHD3	99	94.757	ENSCAPG00000014864	CHD3	99	94.631	Cavia_aperea
ENSMNEG00000001728	CHD3	99	97.488	ENSCPOG00000022653	CHD3	99	97.140	Cavia_porcellus
ENSMNEG00000001728	CHD3	100	99.000	ENSCCAG00000034792	CHD3	100	99.000	Cebus_capucinus
ENSMNEG00000001728	CHD3	100	99.950	ENSCATG00000041717	CHD3	100	99.950	Cercocebus_atys
ENSMNEG00000001728	CHD3	99	97.652	ENSCLAG00000010523	CHD3	100	98.396	Chinchilla_lanigera
ENSMNEG00000001728	CHD3	99	99.071	ENSCSAG00000011122	CHD3	100	99.644	Chlorocebus_sabaeus
ENSMNEG00000001728	CHD3	92	86.262	ENSCPBG00000011966	CHD3	99	87.784	Chrysemys_picta_bellii
ENSMNEG00000001728	CHD3	100	99.847	ENSCANG00000037641	CHD3	100	99.847	Colobus_angolensis_palliatus
ENSMNEG00000001728	CHD3	99	96.779	ENSCGRG00001011306	Chd3	100	97.622	Cricetulus_griseus_chok1gshd
ENSMNEG00000001728	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSMNEG00000001728	CHD3	92	79.605	ENSCSEG00000004489	chd3	99	76.090	Cynoglossus_semilaevis
ENSMNEG00000001728	CHD3	89	82.072	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSMNEG00000001728	CHD3	93	82.215	ENSDARG00000021405	chd3	99	76.427	Danio_rerio
ENSMNEG00000001728	CHD3	98	83.713	ENSDNOG00000047846	CHD3	98	83.713	Dasypus_novemcinctus
ENSMNEG00000001728	CHD3	99	97.104	ENSDORG00000010713	Chd3	100	97.878	Dipodomys_ordii
ENSMNEG00000001728	CHD3	98	92.686	ENSETEG00000017733	CHD3	100	92.060	Echinops_telfairi
ENSMNEG00000001728	CHD3	58	76.937	ENSEBUG00000008310	chd3	99	70.377	Eptatretus_burgeri
ENSMNEG00000001728	CHD3	99	98.088	ENSEASG00005019360	CHD3	100	98.636	Equus_asinus_asinus
ENSMNEG00000001728	CHD3	99	98.143	ENSECAG00000010051	CHD3	100	98.691	Equus_caballus
ENSMNEG00000001728	CHD3	92	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSMNEG00000001728	CHD3	78	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSMNEG00000001728	CHD3	99	97.488	ENSFCAG00000009629	CHD3	99	95.559	Felis_catus
ENSMNEG00000001728	CHD3	99	97.597	ENSFDAG00000008220	CHD3	99	95.374	Fukomys_damarensis
ENSMNEG00000001728	CHD3	90	79.391	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSMNEG00000001728	CHD3	59	76.966	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSMNEG00000001728	CHD3	99	71.697	ENSGACG00000019275	chd3	100	70.896	Gasterosteus_aculeatus
ENSMNEG00000001728	CHD3	81	85.000	ENSGAGG00000013164	CHD3	98	87.101	Gopherus_agassizii
ENSMNEG00000001728	CHD3	100	99.491	ENSGGOG00000013496	CHD3	100	99.491	Gorilla_gorilla
ENSMNEG00000001728	CHD3	99	97.597	ENSHGLG00000012017	CHD3	99	97.712	Heterocephalus_glaber_female
ENSMNEG00000001728	CHD3	88	90.870	ENSHGLG00100013902	CHD3	99	90.870	Heterocephalus_glaber_male
ENSMNEG00000001728	CHD3	96	73.486	ENSHCOG00000010170	chd3	96	72.959	Hippocampus_comes
ENSMNEG00000001728	CHD3	90	79.915	ENSIPUG00000003271	chd3	96	80.848	Ictalurus_punctatus
ENSMNEG00000001728	CHD3	99	98.398	ENSSTOG00000025907	CHD3	100	98.913	Ictidomys_tridecemlineatus
ENSMNEG00000001728	CHD3	100	96.552	ENSJJAG00000017633	Chd3	100	97.620	Jaculus_jaculus
ENSMNEG00000001728	CHD3	87	90.047	ENSKMAG00000019292	chd3	97	75.795	Kryptolebias_marmoratus
ENSMNEG00000001728	CHD3	92	74.557	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSMNEG00000001728	CHD3	98	74.586	ENSLACG00000008031	CHD3	99	74.324	Latimeria_chalumnae
ENSMNEG00000001728	CHD3	99	77.901	ENSLOCG00000013965	chd3	97	77.298	Lepisosteus_oculatus
ENSMNEG00000001728	CHD3	95	93.429	ENSLAFG00000000572	CHD3	100	94.383	Loxodonta_africana
ENSMNEG00000001728	CHD3	100	99.900	ENSMFAG00000020113	CHD3	100	99.900	Macaca_fascicularis
ENSMNEG00000001728	CHD3	100	97.550	ENSMMUG00000022221	CHD3	100	97.550	Macaca_mulatta
ENSMNEG00000001728	CHD3	100	99.950	ENSMLEG00000032249	CHD3	100	99.950	Mandrillus_leucophaeus
ENSMNEG00000001728	CHD3	92	74.738	ENSMAMG00000000564	chd3	99	77.243	Mastacembelus_armatus
ENSMNEG00000001728	CHD3	99	96.968	ENSMAUG00000013873	Chd3	99	94.314	Mesocricetus_auratus
ENSMNEG00000001728	CHD3	99	98.252	ENSMICG00000008741	CHD3	100	95.513	Microcebus_murinus
ENSMNEG00000001728	CHD3	99	96.889	ENSMOCG00000004848	Chd3	100	97.719	Microtus_ochrogaster
ENSMNEG00000001728	CHD3	98	74.653	ENSMMOG00000012699	chd3	99	74.029	Mola_mola
ENSMNEG00000001728	CHD3	99	92.303	ENSMODG00000007509	CHD3	100	94.611	Monodelphis_domestica
ENSMNEG00000001728	CHD3	99	96.619	MGP_CAROLIEiJ_G0016564	Chd3	100	97.561	Mus_caroli
ENSMNEG00000001728	CHD3	99	96.619	ENSMUSG00000018474	Chd3	99	97.561	Mus_musculus
ENSMNEG00000001728	CHD3	99	96.727	MGP_PahariEiJ_G0017695	Chd3	100	97.666	Mus_pahari
ENSMNEG00000001728	CHD3	99	96.619	MGP_SPRETEiJ_G0017400	Chd3	100	97.561	Mus_spretus
ENSMNEG00000001728	CHD3	93	97.375	ENSMPUG00000008861	CHD3	100	97.958	Mustela_putorius_furo
ENSMNEG00000001728	CHD3	100	96.953	ENSMLUG00000014643	-	100	96.953	Myotis_lucifugus
ENSMNEG00000001728	CHD3	99	97.324	ENSNGAG00000000773	Chd3	99	97.229	Nannospalax_galili
ENSMNEG00000001728	CHD3	92	74.838	ENSNBRG00000000636	chd3	98	75.958	Neolamprologus_brichardi
ENSMNEG00000001728	CHD3	98	96.729	ENSNLEG00000009770	CHD3	100	96.729	Nomascus_leucogenys
ENSMNEG00000001728	CHD3	87	90.934	ENSMEUG00000005852	CHD3	87	91.078	Notamacropus_eugenii
ENSMNEG00000001728	CHD3	99	96.066	ENSOPRG00000011069	CHD3	100	96.688	Ochotona_princeps
ENSMNEG00000001728	CHD3	99	97.387	ENSODEG00000017785	CHD3	100	97.387	Octodon_degus
ENSMNEG00000001728	CHD3	98	75.713	ENSONIG00000009292	chd3	100	75.013	Oreochromis_niloticus
ENSMNEG00000001728	CHD3	99	92.713	ENSOCUG00000029299	CHD3	100	93.540	Oryctolagus_cuniculus
ENSMNEG00000001728	CHD3	84	70.966	ENSORLG00000007107	chd3	93	71.727	Oryzias_latipes
ENSMNEG00000001728	CHD3	56	75.315	ENSORLG00020008387	chd3	95	73.698	Oryzias_latipes_hni
ENSMNEG00000001728	CHD3	76	79.601	ENSOMEG00000013691	chd3	99	78.188	Oryzias_melastigma
ENSMNEG00000001728	CHD3	99	97.652	ENSOGAG00000003216	CHD3	100	98.223	Otolemur_garnettii
ENSMNEG00000001728	CHD3	99	95.706	ENSOARG00000017855	CHD3	99	95.706	Ovis_aries
ENSMNEG00000001728	CHD3	100	97.243	ENSPPAG00000032886	CHD3	100	97.243	Pan_paniscus
ENSMNEG00000001728	CHD3	99	97.706	ENSPPRG00000000626	CHD3	99	97.660	Panthera_pardus
ENSMNEG00000001728	CHD3	100	99.695	ENSPTRG00000008714	CHD3	100	99.695	Pan_troglodytes
ENSMNEG00000001728	CHD3	100	99.950	ENSPANG00000023938	CHD3	100	99.950	Papio_anubis
ENSMNEG00000001728	CHD3	97	78.406	ENSPKIG00000006305	chd3	99	79.254	Paramormyrops_kingsleyae
ENSMNEG00000001728	CHD3	59	90.602	ENSPSIG00000010177	CHD3	98	90.876	Pelodiscus_sinensis
ENSMNEG00000001728	CHD3	99	96.873	ENSPEMG00000014262	Chd3	100	96.873	Peromyscus_maniculatus_bairdii
ENSMNEG00000001728	CHD3	99	93.238	ENSPCIG00000005442	CHD3	99	93.795	Phascolarctos_cinereus
ENSMNEG00000001728	CHD3	98	73.806	ENSPFOG00000012464	chd3	92	73.808	Poecilia_formosa
ENSMNEG00000001728	CHD3	89	83.133	ENSPLAG00000002887	chd3	96	83.133	Poecilia_latipinna
ENSMNEG00000001728	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSMNEG00000001728	CHD3	91	84.502	ENSPREG00000011044	chd3	99	79.301	Poecilia_reticulata
ENSMNEG00000001728	CHD3	99	96.066	ENSPPYG00000007940	CHD3	100	94.650	Pongo_abelii
ENSMNEG00000001728	CHD3	96	97.750	ENSPCAG00000004350	CHD3	96	97.575	Procavia_capensis
ENSMNEG00000001728	CHD3	100	98.252	ENSPCOG00000020952	CHD3	100	98.252	Propithecus_coquereli
ENSMNEG00000001728	CHD3	86	98.796	ENSPVAG00000016344	CHD3	87	97.260	Pteropus_vampyrus
ENSMNEG00000001728	CHD3	96	79.818	ENSPNAG00000020393	chd3	98	81.611	Pygocentrus_nattereri
ENSMNEG00000001728	CHD3	99	96.129	ENSRNOG00000009722	Chd3	100	96.678	Rattus_norvegicus
ENSMNEG00000001728	CHD3	100	96.691	ENSRBIG00000033562	CHD3	100	96.691	Rhinopithecus_bieti
ENSMNEG00000001728	CHD3	100	99.949	ENSRROG00000029554	CHD3	100	99.949	Rhinopithecus_roxellana
ENSMNEG00000001728	CHD3	100	99.287	ENSSBOG00000020719	CHD3	100	99.287	Saimiri_boliviensis_boliviensis
ENSMNEG00000001728	CHD3	98	94.860	ENSSHAG00000014412	CHD3	100	94.860	Sarcophilus_harrisii
ENSMNEG00000001728	CHD3	94	80.344	ENSSFOG00015023123	chd3	98	75.426	Scleropages_formosus
ENSMNEG00000001728	CHD3	86	91.304	ENSSMAG00000006451	chd3	99	77.117	Scophthalmus_maximus
ENSMNEG00000001728	CHD3	55	75.025	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSMNEG00000001728	CHD3	94	77.379	ENSSPAG00000013694	chd3	99	80.043	Stegastes_partitus
ENSMNEG00000001728	CHD3	99	98.124	ENSSSCG00000021363	CHD3	100	98.146	Sus_scrofa
ENSMNEG00000001728	CHD3	78	75.000	ENSTRUG00000014990	chd3	89	76.269	Takifugu_rubripes
ENSMNEG00000001728	CHD3	99	73.673	ENSTNIG00000012998	chd3	99	73.337	Tetraodon_nigroviridis
ENSMNEG00000001728	CHD3	69	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSMNEG00000001728	CHD3	99	100.000	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSMNEG00000001728	CHD3	99	96.464	ENSUAMG00000005475	CHD3	100	96.464	Ursus_americanus
ENSMNEG00000001728	CHD3	59	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSMNEG00000001728	CHD3	99	97.706	ENSVVUG00000028011	CHD3	99	98.135	Vulpes_vulpes
ENSMNEG00000001728	CHD3	99	73.362	ENSXETG00000012991	chd3	92	73.820	Xenopus_tropicalis
ENSMNEG00000001728	CHD3	50	91.429	ENSXCOG00000000809	chd3	96	82.976	Xiphophorus_couchianus
ENSMNEG00000001728	CHD3	85	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus