EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000007537 (Gene tree)
Gene ID: 105475173
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 37952 bases
Position: chrKQ009049.1:15734889-15772840
Accession: 105475173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000001679	MRP-S27	PF10037.9	6.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000008261	PTCD2-202	840	-	ENSMNEP00000001685	279 (aa)	-	A0A2K6ARA6
ENSMNET00000008242	PTCD2-201	2825	XM_011730207	ENSMNEP00000001679	383 (aa)	XP_011728509	A0A2K6ARA3
ENSMNET00000008265	PTCD2-203	651	-	ENSMNEP00000001687	216 (aa)	-	A0A2K6ARA5

Gene Model

Click here to download ENSMNEG00000007537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000007537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000007537	PTCD2	100	91.123	ENSG00000049883	PTCD2	100	92.118	Homo_sapiens
ENSMNEG00000007537	PTCD2	95	47.945	ENSAPOG00000020682	ptcd2	95	47.945	Acanthochromis_polyacanthus
ENSMNEG00000007537	PTCD2	100	76.240	ENSAMEG00000007194	PTCD2	99	76.240	Ailuropoda_melanoleuca
ENSMNEG00000007537	PTCD2	90	42.407	ENSACIG00000002053	ptcd2	100	42.407	Amphilophus_citrinellus
ENSMNEG00000007537	PTCD2	98	46.667	ENSAOCG00000006616	ptcd2	96	46.667	Amphiprion_ocellaris
ENSMNEG00000007537	PTCD2	98	46.667	ENSAPEG00000022926	ptcd2	96	46.667	Amphiprion_percula
ENSMNEG00000007537	PTCD2	99	57.218	ENSACAG00000009747	PTCD2	97	57.218	Anolis_carolinensis
ENSMNEG00000007537	PTCD2	100	86.945	ENSANAG00000029353	PTCD2	99	86.945	Aotus_nancymaae
ENSMNEG00000007537	PTCD2	98	44.533	ENSACLG00000027742	ptcd2	96	44.533	Astatotilapia_calliptera
ENSMNEG00000007537	PTCD2	92	43.785	ENSAMXG00000029404	ptcd2	93	43.785	Astyanax_mexicanus
ENSMNEG00000007537	PTCD2	100	79.948	ENSBTAG00000014675	PTCD2	100	79.948	Bos_taurus
ENSMNEG00000007537	PTCD2	100	86.423	ENSCJAG00000016364	PTCD2	99	86.423	Callithrix_jacchus
ENSMNEG00000007537	PTCD2	100	75.457	ENSCAFG00000007982	PTCD2	90	75.457	Canis_familiaris
ENSMNEG00000007537	PTCD2	90	77.746	ENSCAFG00020019147	PTCD2	97	77.746	Canis_lupus_dingo
ENSMNEG00000007537	PTCD2	100	79.948	ENSCHIG00000017118	PTCD2	100	79.948	Capra_hircus
ENSMNEG00000007537	PTCD2	100	75.718	ENSCPOG00000040168	PTCD2	100	75.718	Cavia_porcellus
ENSMNEG00000007537	PTCD2	100	86.162	ENSCCAG00000029389	-	99	86.162	Cebus_capucinus
ENSMNEG00000007537	PTCD2	83	78.683	ENSCCAG00000021996	-	98	78.683	Cebus_capucinus
ENSMNEG00000007537	PTCD2	100	98.172	ENSCATG00000019069	PTCD2	100	98.172	Cercocebus_atys
ENSMNEG00000007537	PTCD2	100	74.413	ENSCLAG00000000072	PTCD2	100	74.413	Chinchilla_lanigera
ENSMNEG00000007537	PTCD2	100	96.345	ENSCSAG00000015623	PTCD2	100	96.345	Chlorocebus_sabaeus
ENSMNEG00000007537	PTCD2	90	58.908	ENSCHOG00000010634	PTCD2	100	58.908	Choloepus_hoffmanni
ENSMNEG00000007537	PTCD2	100	55.325	ENSCPBG00000000216	PTCD2	98	55.325	Chrysemys_picta_bellii
ENSMNEG00000007537	PTCD2	100	95.561	ENSCANG00000035636	PTCD2	99	95.561	Colobus_angolensis_palliatus
ENSMNEG00000007537	PTCD2	100	73.629	ENSCGRG00001015289	Ptcd2	84	73.629	Cricetulus_griseus_chok1gshd
ENSMNEG00000007537	PTCD2	100	73.629	ENSCGRG00000006193	Ptcd2	84	73.629	Cricetulus_griseus_crigri
ENSMNEG00000007537	PTCD2	91	46.552	ENSCVAG00000001285	ptcd2	89	46.552	Cyprinodon_variegatus
ENSMNEG00000007537	PTCD2	99	44.503	ENSDARG00000035391	ptcd2	99	44.503	Danio_rerio
ENSMNEG00000007537	PTCD2	100	75.979	ENSDNOG00000008719	PTCD2	100	75.979	Dasypus_novemcinctus
ENSMNEG00000007537	PTCD2	100	76.744	ENSDORG00000004921	Ptcd2	100	76.744	Dipodomys_ordii
ENSMNEG00000007537	PTCD2	100	67.448	ENSETEG00000016542	PTCD2	99	67.448	Echinops_telfairi
ENSMNEG00000007537	PTCD2	100	79.373	ENSEASG00005018038	PTCD2	100	79.373	Equus_asinus_asinus
ENSMNEG00000007537	PTCD2	100	79.373	ENSECAG00000007022	PTCD2	98	79.373	Equus_caballus
ENSMNEG00000007537	PTCD2	100	72.324	ENSEEUG00000014031	PTCD2	99	72.324	Erinaceus_europaeus
ENSMNEG00000007537	PTCD2	91	51.567	ENSELUG00000003584	ptcd2	91	51.567	Esox_lucius
ENSMNEG00000007537	PTCD2	100	71.540	ENSFCAG00000045432	PTCD2	82	71.540	Felis_catus
ENSMNEG00000007537	PTCD2	85	52.905	ENSFALG00000010299	PTCD2	99	52.905	Ficedula_albicollis
ENSMNEG00000007537	PTCD2	100	78.851	ENSFDAG00000018461	PTCD2	100	78.851	Fukomys_damarensis
ENSMNEG00000007537	PTCD2	91	50.997	ENSGMOG00000003637	ptcd2	91	50.997	Gadus_morhua
ENSMNEG00000007537	PTCD2	91	51.429	ENSGALG00000038260	PTCD2	100	49.741	Gallus_gallus
ENSMNEG00000007537	PTCD2	99	58.486	ENSGAGG00000021952	PTCD2	98	58.486	Gopherus_agassizii
ENSMNEG00000007537	PTCD2	100	90.862	ENSGGOG00000010695	PTCD2	99	90.862	Gorilla_gorilla
ENSMNEG00000007537	PTCD2	98	44.267	ENSHBUG00000009191	ptcd2	96	44.267	Haplochromis_burtoni
ENSMNEG00000007537	PTCD2	100	75.718	ENSHGLG00000001234	PTCD2	100	75.718	Heterocephalus_glaber_female
ENSMNEG00000007537	PTCD2	100	75.718	ENSHGLG00100015419	PTCD2	100	75.718	Heterocephalus_glaber_male
ENSMNEG00000007537	PTCD2	95	46.832	ENSHCOG00000001703	ptcd2	92	46.832	Hippocampus_comes
ENSMNEG00000007537	PTCD2	91	43.840	ENSIPUG00000006080	ptcd2	96	43.935	Ictalurus_punctatus
ENSMNEG00000007537	PTCD2	99	79.319	ENSSTOG00000006596	PTCD2	99	79.319	Ictidomys_tridecemlineatus
ENSMNEG00000007537	PTCD2	100	77.546	ENSJJAG00000024388	Ptcd2	100	77.546	Jaculus_jaculus
ENSMNEG00000007537	PTCD2	95	42.975	ENSKMAG00000009329	ptcd2	94	42.975	Kryptolebias_marmoratus
ENSMNEG00000007537	PTCD2	98	45.867	ENSLBEG00000024871	ptcd2	95	45.867	Labrus_bergylta
ENSMNEG00000007537	PTCD2	95	54.918	ENSLOCG00000011122	ptcd2	95	54.918	Lepisosteus_oculatus
ENSMNEG00000007537	PTCD2	81	76.527	ENSLAFG00000004115	PTCD2	100	76.527	Loxodonta_africana
ENSMNEG00000007537	PTCD2	100	99.217	ENSMFAG00000031516	PTCD2	99	99.217	Macaca_fascicularis
ENSMNEG00000007537	PTCD2	100	98.433	ENSMLEG00000031093	PTCD2	99	98.433	Mandrillus_leucophaeus
ENSMNEG00000007537	PTCD2	98	48.000	ENSMAMG00000018529	ptcd2	97	48.000	Mastacembelus_armatus
ENSMNEG00000007537	PTCD2	98	44.533	ENSMZEG00005003625	ptcd2	96	44.533	Maylandia_zebra
ENSMNEG00000007537	PTCD2	91	52.011	ENSMGAG00000005033	PTCD2	100	52.011	Meleagris_gallopavo
ENSMNEG00000007537	PTCD2	100	57.441	ENSMAUG00000020253	Ptcd2	100	57.441	Mesocricetus_auratus
ENSMNEG00000007537	PTCD2	100	80.157	ENSMICG00000004535	PTCD2	99	80.157	Microcebus_murinus
ENSMNEG00000007537	PTCD2	100	73.107	ENSMOCG00000019985	Ptcd2	100	73.107	Microtus_ochrogaster
ENSMNEG00000007537	PTCD2	100	58.073	ENSMODG00000001695	PTCD2	100	58.073	Monodelphis_domestica
ENSMNEG00000007537	PTCD2	91	50.575	ENSMALG00000022372	ptcd2	91	50.575	Monopterus_albus
ENSMNEG00000007537	PTCD2	100	73.107	MGP_CAROLIEiJ_G0018829	Ptcd2	100	73.107	Mus_caroli
ENSMNEG00000007537	PTCD2	100	72.324	ENSMUSG00000021650	Ptcd2	100	72.324	Mus_musculus
ENSMNEG00000007537	PTCD2	100	74.935	MGP_PahariEiJ_G0015904	Ptcd2	100	74.935	Mus_pahari
ENSMNEG00000007537	PTCD2	100	72.846	MGP_SPRETEiJ_G0019711	Ptcd2	100	72.846	Mus_spretus
ENSMNEG00000007537	PTCD2	100	78.329	ENSMPUG00000014401	PTCD2	100	78.329	Mustela_putorius_furo
ENSMNEG00000007537	PTCD2	100	77.023	ENSMLUG00000007374	PTCD2	99	77.023	Myotis_lucifugus
ENSMNEG00000007537	PTCD2	100	72.846	ENSNGAG00000005027	Ptcd2	100	72.846	Nannospalax_galili
ENSMNEG00000007537	PTCD2	96	44.986	ENSNBRG00000008174	ptcd2	96	44.986	Neolamprologus_brichardi
ENSMNEG00000007537	PTCD2	86	45.152	ENSNBRG00000000092	-	100	45.152	Neolamprologus_brichardi
ENSMNEG00000007537	PTCD2	100	90.862	ENSNLEG00000004516	PTCD2	99	90.862	Nomascus_leucogenys
ENSMNEG00000007537	PTCD2	100	46.736	ENSMEUG00000014012	-	99	46.736	Notamacropus_eugenii
ENSMNEG00000007537	PTCD2	100	72.585	ENSOPRG00000007290	PTCD2	99	72.585	Ochotona_princeps
ENSMNEG00000007537	PTCD2	100	77.023	ENSODEG00000016417	PTCD2	100	77.023	Octodon_degus
ENSMNEG00000007537	PTCD2	82	45.886	ENSONIG00000011269	ptcd2	92	45.886	Oreochromis_niloticus
ENSMNEG00000007537	PTCD2	95	80.274	ENSOCUG00000007970	PTCD2	100	78.590	Oryctolagus_cuniculus
ENSMNEG00000007537	PTCD2	96	46.070	ENSORLG00000003851	ptcd2	94	46.070	Oryzias_latipes
ENSMNEG00000007537	PTCD2	96	45.257	ENSORLG00020009823	ptcd2	95	45.257	Oryzias_latipes_hni
ENSMNEG00000007537	PTCD2	90	47.110	ENSORLG00015016777	ptcd2	99	47.110	Oryzias_latipes_hsok
ENSMNEG00000007537	PTCD2	94	45.304	ENSOMEG00000012396	ptcd2	87	45.304	Oryzias_melastigma
ENSMNEG00000007537	PTCD2	100	74.674	ENSOGAG00000008390	PTCD2	99	74.674	Otolemur_garnettii
ENSMNEG00000007537	PTCD2	100	79.688	ENSOARG00000005087	PTCD2	99	79.688	Ovis_aries
ENSMNEG00000007537	PTCD2	100	90.601	ENSPPAG00000028480	PTCD2	99	90.601	Pan_paniscus
ENSMNEG00000007537	PTCD2	100	90.862	ENSPTRG00000016968	PTCD2	99	90.862	Pan_troglodytes
ENSMNEG00000007537	PTCD2	90	99.420	ENSPANG00000006611	PTCD2	89	99.420	Papio_anubis
ENSMNEG00000007537	PTCD2	92	48.864	ENSPKIG00000019896	ptcd2	92	48.864	Paramormyrops_kingsleyae
ENSMNEG00000007537	PTCD2	81	62.783	ENSPSIG00000014559	PTCD2	96	62.783	Pelodiscus_sinensis
ENSMNEG00000007537	PTCD2	100	72.468	ENSPEMG00000000884	Ptcd2	100	72.468	Peromyscus_maniculatus_bairdii
ENSMNEG00000007537	PTCD2	100	59.635	ENSPCIG00000029047	PTCD2	100	59.635	Phascolarctos_cinereus
ENSMNEG00000007537	PTCD2	91	45.690	ENSPLAG00000010456	ptcd2	91	45.690	Poecilia_latipinna
ENSMNEG00000007537	PTCD2	98	44.533	ENSPREG00000021797	ptcd2	95	44.533	Poecilia_reticulata
ENSMNEG00000007537	PTCD2	100	77.546	ENSPPYG00000015543	PTCD2	99	77.546	Pongo_abelii
ENSMNEG00000007537	PTCD2	81	65.049	ENSPCAG00000006806	PTCD2	98	65.049	Procavia_capensis
ENSMNEG00000007537	PTCD2	100	75.196	ENSPVAG00000010935	PTCD2	99	75.196	Pteropus_vampyrus
ENSMNEG00000007537	PTCD2	98	44.533	ENSPNYG00000003122	ptcd2	96	44.533	Pundamilia_nyererei
ENSMNEG00000007537	PTCD2	97	48.138	ENSPNAG00000021490	ptcd2	95	48.138	Pygocentrus_nattereri
ENSMNEG00000007537	PTCD2	100	72.846	ENSRNOG00000028403	Ptcd2	100	72.846	Rattus_norvegicus
ENSMNEG00000007537	PTCD2	100	89.817	ENSRBIG00000032929	PTCD2	99	89.817	Rhinopithecus_bieti
ENSMNEG00000007537	PTCD2	100	95.039	ENSRROG00000000080	PTCD2	100	95.039	Rhinopithecus_roxellana
ENSMNEG00000007537	PTCD2	100	84.595	ENSSBOG00000018911	PTCD2	100	84.595	Saimiri_boliviensis_boliviensis
ENSMNEG00000007537	PTCD2	100	59.115	ENSSHAG00000003833	PTCD2	99	59.115	Sarcophilus_harrisii
ENSMNEG00000007537	PTCD2	94	46.556	ENSSFOG00015015415	ptcd2	93	46.556	Scleropages_formosus
ENSMNEG00000007537	PTCD2	91	45.821	ENSSMAG00000010350	ptcd2	90	45.821	Scophthalmus_maximus
ENSMNEG00000007537	PTCD2	98	48.000	ENSSDUG00000008142	ptcd2	93	48.000	Seriola_dumerili
ENSMNEG00000007537	PTCD2	98	48.267	ENSSLDG00000015284	ptcd2	97	48.267	Seriola_lalandi_dorsalis
ENSMNEG00000007537	PTCD2	81	68.285	ENSSARG00000004983	PTCD2	99	68.285	Sorex_araneus
ENSMNEG00000007537	PTCD2	100	51.948	ENSSPUG00000000176	PTCD2	96	51.948	Sphenodon_punctatus
ENSMNEG00000007537	PTCD2	95	46.154	ENSSPAG00000008591	ptcd2	93	46.154	Stegastes_partitus
ENSMNEG00000007537	PTCD2	100	79.896	ENSSSCG00000016975	PTCD2	90	79.896	Sus_scrofa
ENSMNEG00000007537	PTCD2	90	52.754	ENSTGUG00000005705	PTCD2	99	52.754	Taeniopygia_guttata
ENSMNEG00000007537	PTCD2	100	75.457	ENSTBEG00000016559	PTCD2	99	75.457	Tupaia_belangeri
ENSMNEG00000007537	PTCD2	100	79.948	ENSTTRG00000011851	PTCD2	99	79.948	Tursiops_truncatus
ENSMNEG00000007537	PTCD2	100	76.501	ENSUAMG00000007583	PTCD2	90	76.501	Ursus_americanus
ENSMNEG00000007537	PTCD2	100	76.240	ENSUMAG00000007666	PTCD2	100	76.240	Ursus_maritimus
ENSMNEG00000007537	PTCD2	100	78.646	ENSVPAG00000009597	PTCD2	99	78.646	Vicugna_pacos
ENSMNEG00000007537	PTCD2	100	75.718	ENSVVUG00000007299	-	100	75.718	Vulpes_vulpes
ENSMNEG00000007537	PTCD2	91	54.131	ENSXETG00000031652	PTCD2	92	54.131	Xenopus_tropicalis
ENSMNEG00000007537	PTCD2	91	45.402	ENSXMAG00000005940	ptcd2	82	45.402	Xiphophorus_maculatus