EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000016408 (Gene tree)
Gene ID: 105497241
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 103682 bases
Position: chrKQ005923.1:7288039-7391720
Accession: 105497240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000003556	ResIII	PF04851.15	1.4e-11	1	1
ENSMNEP00000003548	ResIII	PF04851.15	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000018008	-	2809	-	ENSMNEP00000003556	887 (aa)	-	A0A2K6AWL6
ENSMNET00000017990	-	3094	XM_011768213	ENSMNEP00000003548	907 (aa)	XP_011766515	A0A2K6AWM9
ENSMNET00000018053	-	7054	XM_011768215	ENSMNEP00000003564	299 (aa)	XP_011766517	A0A2K6AWM2
ENSMNET00000017906	-	5402	XM_011768214	ENSMNEP00000003532	116 (aa)	XP_011766516	A0A2K6AWK6

Gene Model

Click here to download ENSMNEG00000016408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000016408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000016408	-	71	43.590	ENSMNEG00000038562	RAD54L	84	43.590
ENSMNEG00000016408	-	61	32.226	ENSMNEG00000035630	ERCC6L2	82	32.226
ENSMNEG00000016408	-	55	33.017	ENSMNEG00000038117	SMARCAD1	84	33.017
ENSMNEG00000016408	-	56	31.518	ENSMNEG00000039905	CHD1L	50	31.518

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000016408	-	80	98.209	ENSG00000265817	FSBP	100	98.209	Homo_sapiens
ENSMNEG00000016408	-	100	97.473	ENSG00000197275	RAD54B	100	97.473	Homo_sapiens
ENSMNEG00000016408	-	99	86.703	ENSAMEG00000005834	-	99	86.703	Ailuropoda_melanoleuca
ENSMNEG00000016408	-	99	54.326	ENSACIG00000013005	rad54b	99	54.326	Amphilophus_citrinellus
ENSMNEG00000016408	-	99	54.478	ENSAOCG00000008523	rad54b	99	54.478	Amphiprion_ocellaris
ENSMNEG00000016408	-	99	54.785	ENSAPEG00000001673	rad54b	99	54.895	Amphiprion_percula
ENSMNEG00000016408	-	99	53.980	ENSATEG00000001527	rad54b	99	53.980	Anabas_testudineus
ENSMNEG00000016408	-	99	69.365	ENSAPLG00000014366	-	99	69.365	Anas_platyrhynchos
ENSMNEG00000016408	-	87	70.729	ENSACAG00000003671	-	99	70.729	Anolis_carolinensis
ENSMNEG00000016408	-	71	94.290	ENSANAG00000019528	-	100	94.290	Aotus_nancymaae
ENSMNEG00000016408	-	99	54.386	ENSACLG00000007826	rad54b	99	54.386	Astatotilapia_calliptera
ENSMNEG00000016408	-	86	58.015	ENSAMXG00000039985	rad54b	94	57.755	Astyanax_mexicanus
ENSMNEG00000016408	-	99	85.132	ENSBTAG00000000632	RAD54B	99	85.132	Bos_taurus
ENSMNEG00000016408	-	81	35.341	WBGene00013792	Y116A8C.13	84	35.695	Caenorhabditis_elegans
ENSMNEG00000016408	-	100	94.066	ENSCJAG00000000080	-	100	95.724	Callithrix_jacchus
ENSMNEG00000016408	-	99	84.945	ENSCAFG00000009179	RAD54B	99	84.945	Canis_familiaris
ENSMNEG00000016408	-	99	84.835	ENSCAFG00020012084	-	99	84.835	Canis_lupus_dingo
ENSMNEG00000016408	-	99	84.581	ENSCHIG00000008230	-	99	84.581	Capra_hircus
ENSMNEG00000016408	-	99	89.219	ENSTSYG00000013234	-	99	89.219	Carlito_syrichta
ENSMNEG00000016408	-	99	84.123	ENSCPOG00000011643	-	99	84.123	Cavia_porcellus
ENSMNEG00000016408	-	100	94.066	ENSCCAG00000011754	-	100	95.586	Cebus_capucinus
ENSMNEG00000016408	-	100	99.339	ENSCATG00000030661	-	100	99.448	Cercocebus_atys
ENSMNEG00000016408	-	100	84.396	ENSCLAG00000010476	-	100	84.396	Chinchilla_lanigera
ENSMNEG00000016408	-	100	98.789	ENSCSAG00000012712	-	100	98.789	Chlorocebus_sabaeus
ENSMNEG00000016408	-	100	70.403	ENSCPBG00000003204	-	99	71.056	Chrysemys_picta_bellii
ENSMNEG00000016408	-	100	98.678	ENSCANG00000017939	-	100	99.033	Colobus_angolensis_palliatus
ENSMNEG00000016408	-	99	79.824	ENSCGRG00001020184	Rad54b	99	79.824	Cricetulus_griseus_chok1gshd
ENSMNEG00000016408	-	99	78.501	ENSCGRG00000016752	Rad54b	99	78.501	Cricetulus_griseus_crigri
ENSMNEG00000016408	-	93	61.538	ENSCSEG00000001601	rad54b	99	61.538	Cynoglossus_semilaevis
ENSMNEG00000016408	-	99	55.956	ENSCVAG00000009200	rad54b	99	55.956	Cyprinodon_variegatus
ENSMNEG00000016408	-	99	53.057	ENSDARG00000092134	rad54b	99	60.555	Danio_rerio
ENSMNEG00000016408	-	99	84.430	ENSDNOG00000015535	-	99	84.430	Dasypus_novemcinctus
ENSMNEG00000016408	-	99	84.378	ENSDORG00000002492	Rad54b	99	84.378	Dipodomys_ordii
ENSMNEG00000016408	-	89	81.599	ENSETEG00000010605	-	100	81.599	Echinops_telfairi
ENSMNEG00000016408	-	99	46.421	ENSEBUG00000009104	rad54b	99	46.394	Eptatretus_burgeri
ENSMNEG00000016408	-	97	86.281	ENSEASG00005004021	-	99	86.281	Equus_asinus_asinus
ENSMNEG00000016408	-	99	86.909	ENSECAG00000021949	-	99	86.909	Equus_caballus
ENSMNEG00000016408	-	83	81.132	ENSEEUG00000008056	-	83	81.132	Erinaceus_europaeus
ENSMNEG00000016408	-	99	53.682	ENSELUG00000009287	rad54b	99	53.635	Esox_lucius
ENSMNEG00000016408	-	99	86.469	ENSFCAG00000015513	-	99	89.779	Felis_catus
ENSMNEG00000016408	-	99	68.804	ENSFALG00000005467	-	99	68.804	Ficedula_albicollis
ENSMNEG00000016408	-	99	85.132	ENSFDAG00000020541	-	100	85.132	Fukomys_damarensis
ENSMNEG00000016408	-	86	58.166	ENSFHEG00000014382	rad54b	87	58.291	Fundulus_heteroclitus
ENSMNEG00000016408	-	86	56.030	ENSGMOG00000014774	rad54b	98	56.030	Gadus_morhua
ENSMNEG00000016408	-	100	68.078	ENSGALG00000043597	RAD54B	99	68.078	Gallus_gallus
ENSMNEG00000016408	-	99	54.545	ENSGAFG00000007901	rad54b	99	54.545	Gambusia_affinis
ENSMNEG00000016408	-	99	54.693	ENSGACG00000009128	rad54b	99	54.693	Gasterosteus_aculeatus
ENSMNEG00000016408	-	100	69.913	ENSGAGG00000018747	-	99	69.913	Gopherus_agassizii
ENSMNEG00000016408	-	99	97.250	ENSGGOG00000023516	-	99	97.250	Gorilla_gorilla
ENSMNEG00000016408	-	99	53.526	ENSHBUG00000016017	rad54b	99	53.526	Haplochromis_burtoni
ENSMNEG00000016408	-	99	83.698	ENSHGLG00000008263	RAD54B	99	83.698	Heterocephalus_glaber_female
ENSMNEG00000016408	-	99	82.935	ENSHGLG00100008108	-	99	82.935	Heterocephalus_glaber_male
ENSMNEG00000016408	-	99	52.637	ENSHCOG00000004764	rad54b	98	55.624	Hippocampus_comes
ENSMNEG00000016408	-	99	52.922	ENSIPUG00000018531	rad54b	99	52.922	Ictalurus_punctatus
ENSMNEG00000016408	-	99	84.420	ENSSTOG00000010791	-	99	84.420	Ictidomys_tridecemlineatus
ENSMNEG00000016408	-	99	81.918	ENSJJAG00000010314	Rad54b	99	81.918	Jaculus_jaculus
ENSMNEG00000016408	-	99	52.464	ENSKMAG00000004744	rad54b	99	52.464	Kryptolebias_marmoratus
ENSMNEG00000016408	-	82	70.053	ENSLACG00000000859	-	100	70.053	Latimeria_chalumnae
ENSMNEG00000016408	-	99	57.672	ENSLOCG00000010100	rad54b	97	62.636	Lepisosteus_oculatus
ENSMNEG00000016408	-	89	84.777	ENSLAFG00000015315	-	100	84.777	Loxodonta_africana
ENSMNEG00000016408	-	100	99.670	ENSMFAG00000031629	-	100	99.724	Macaca_fascicularis
ENSMNEG00000016408	-	100	99.670	ENSMMUG00000005659	-	100	99.670	Macaca_mulatta
ENSMNEG00000016408	-	100	99.449	ENSMLEG00000006946	-	100	99.449	Mandrillus_leucophaeus
ENSMNEG00000016408	-	99	54.951	ENSMAMG00000012269	rad54b	99	54.951	Mastacembelus_armatus
ENSMNEG00000016408	-	99	53.739	ENSMZEG00005005281	rad54b	95	58.913	Maylandia_zebra
ENSMNEG00000016408	-	100	67.970	ENSMGAG00000012024	-	99	67.970	Meleagris_gallopavo
ENSMNEG00000016408	-	99	79.824	ENSMAUG00000013586	Rad54b	99	79.824	Mesocricetus_auratus
ENSMNEG00000016408	-	99	84.378	ENSMICG00000000754	-	99	84.378	Microcebus_murinus
ENSMNEG00000016408	-	99	77.558	ENSMOCG00000020035	Rad54b	99	77.778	Microtus_ochrogaster
ENSMNEG00000016408	-	99	53.762	ENSMMOG00000003394	rad54b	99	53.762	Mola_mola
ENSMNEG00000016408	-	88	76.741	ENSMODG00000007343	-	99	77.125	Monodelphis_domestica
ENSMNEG00000016408	-	71	58.942	ENSMALG00000001520	rad54b	99	58.942	Monopterus_albus
ENSMNEG00000016408	-	99	78.304	MGP_CAROLIEiJ_G0025810	Rad54b	99	78.304	Mus_caroli
ENSMNEG00000016408	-	99	77.729	ENSMUSG00000078773	Rad54b	99	77.729	Mus_musculus
ENSMNEG00000016408	-	99	78.501	MGP_PahariEiJ_G0023933	Rad54b	99	78.501	Mus_pahari
ENSMNEG00000016408	-	99	78.634	MGP_SPRETEiJ_G0026758	Rad54b	99	78.634	Mus_spretus
ENSMNEG00000016408	-	89	87.145	ENSMPUG00000008878	-	99	87.145	Mustela_putorius_furo
ENSMNEG00000016408	-	100	84.430	ENSMLUG00000008953	-	100	84.430	Myotis_lucifugus
ENSMNEG00000016408	-	99	83.133	ENSNGAG00000017537	Rad54b	99	83.133	Nannospalax_galili
ENSMNEG00000016408	-	99	54.057	ENSNBRG00000013394	rad54b	99	54.057	Neolamprologus_brichardi
ENSMNEG00000016408	-	100	97.363	ENSNLEG00000003062	-	99	97.934	Nomascus_leucogenys
ENSMNEG00000016408	-	71	75.439	ENSMEUG00000012426	-	71	75.439	Notamacropus_eugenii
ENSMNEG00000016408	-	78	86.553	ENSODEG00000002650	-	95	86.553	Octodon_degus
ENSMNEG00000016408	-	99	83.682	ENSODEG00000019564	-	99	83.682	Octodon_degus
ENSMNEG00000016408	-	99	54.555	ENSONIG00000006067	rad54b	99	54.555	Oreochromis_niloticus
ENSMNEG00000016408	-	82	77.097	ENSOANG00000011348	-	99	77.097	Ornithorhynchus_anatinus
ENSMNEG00000016408	-	99	85.479	ENSOCUG00000016478	-	99	85.479	Oryctolagus_cuniculus
ENSMNEG00000016408	-	99	54.478	ENSORLG00000008918	rad54b	99	62.229	Oryzias_latipes
ENSMNEG00000016408	-	71	62.384	ENSORLG00020012171	rad54b	99	62.384	Oryzias_latipes_hni
ENSMNEG00000016408	-	99	54.277	ENSORLG00015018536	rad54b	99	54.277	Oryzias_latipes_hsok
ENSMNEG00000016408	-	84	59.120	ENSOMEG00000004345	rad54b	99	59.120	Oryzias_melastigma
ENSMNEG00000016408	-	99	86.593	ENSOGAG00000007854	-	99	86.593	Otolemur_garnettii
ENSMNEG00000016408	-	89	86.667	ENSOARG00000007691	-	99	86.667	Ovis_aries
ENSMNEG00000016408	-	100	95.604	ENSPPAG00000029572	-	100	95.604	Pan_paniscus
ENSMNEG00000016408	-	99	86.689	ENSPPRG00000007571	-	99	89.917	Panthera_pardus
ENSMNEG00000016408	-	80	89.917	ENSPTIG00000012670	-	99	89.917	Panthera_tigris_altaica
ENSMNEG00000016408	-	100	97.473	ENSPTRG00000020427	-	100	98.209	Pan_troglodytes
ENSMNEG00000016408	-	100	99.559	ENSPANG00000019566	-	100	99.559	Papio_anubis
ENSMNEG00000016408	-	99	58.152	ENSPKIG00000014974	rad54b	99	58.152	Paramormyrops_kingsleyae
ENSMNEG00000016408	-	100	69.206	ENSPSIG00000002383	-	99	72.794	Pelodiscus_sinensis
ENSMNEG00000016408	-	99	80.066	ENSPEMG00000012133	Rad54b	99	80.066	Peromyscus_maniculatus_bairdii
ENSMNEG00000016408	-	87	57.803	ENSPMAG00000002916	rad54b	99	58.052	Petromyzon_marinus
ENSMNEG00000016408	-	89	77.682	ENSPCIG00000020151	-	94	77.682	Phascolarctos_cinereus
ENSMNEG00000016408	-	99	54.873	ENSPFOG00000023411	rad54b	99	54.873	Poecilia_formosa
ENSMNEG00000016408	-	99	54.873	ENSPLAG00000010430	rad54b	99	54.873	Poecilia_latipinna
ENSMNEG00000016408	-	99	54.873	ENSPMEG00000016873	rad54b	95	59.360	Poecilia_mexicana
ENSMNEG00000016408	-	99	55.277	ENSPREG00000018443	rad54b	99	55.277	Poecilia_reticulata
ENSMNEG00000016408	-	100	97.143	ENSPPYG00000018750	-	100	97.143	Pongo_abelii
ENSMNEG00000016408	-	99	90.000	ENSPCOG00000026845	-	99	91.034	Propithecus_coquereli
ENSMNEG00000016408	-	87	89.474	ENSPVAG00000000261	-	92	89.474	Pteropus_vampyrus
ENSMNEG00000016408	-	86	58.629	ENSPNYG00000018303	rad54b	96	58.629	Pundamilia_nyererei
ENSMNEG00000016408	-	100	54.418	ENSPNAG00000000295	rad54b	99	54.418	Pygocentrus_nattereri
ENSMNEG00000016408	-	99	76.185	ENSRNOG00000039949	Rad54b	99	76.185	Rattus_norvegicus
ENSMNEG00000016408	-	100	98.018	ENSRBIG00000020419	-	100	98.018	Rhinopithecus_bieti
ENSMNEG00000016408	-	100	98.018	ENSRROG00000039897	-	100	98.018	Rhinopithecus_roxellana
ENSMNEG00000016408	-	84	36.606	YBR073W	RDH54	83	37.077	Saccharomyces_cerevisiae
ENSMNEG00000016408	-	100	93.956	ENSSBOG00000028501	-	100	93.956	Saimiri_boliviensis_boliviensis
ENSMNEG00000016408	-	99	74.753	ENSSHAG00000017038	-	99	74.753	Sarcophilus_harrisii
ENSMNEG00000016408	-	64	65.202	ENSSFOG00015008483	rad54b	88	65.202	Scleropages_formosus
ENSMNEG00000016408	-	99	53.128	ENSSMAG00000018659	rad54b	99	53.432	Scophthalmus_maximus
ENSMNEG00000016408	-	99	53.757	ENSSDUG00000001122	rad54b	98	53.757	Seriola_dumerili
ENSMNEG00000016408	-	99	53.733	ENSSLDG00000013787	rad54b	99	53.620	Seriola_lalandi_dorsalis
ENSMNEG00000016408	-	100	68.346	ENSSPUG00000016497	-	99	68.346	Sphenodon_punctatus
ENSMNEG00000016408	-	99	55.628	ENSSPAG00000012800	rad54b	99	55.628	Stegastes_partitus
ENSMNEG00000016408	-	100	84.802	ENSSSCG00000006101	-	99	87.985	Sus_scrofa
ENSMNEG00000016408	-	99	68.256	ENSTGUG00000011880	-	99	68.256	Taeniopygia_guttata
ENSMNEG00000016408	-	87	58.764	ENSTRUG00000010015	rad54b	99	52.886	Takifugu_rubripes
ENSMNEG00000016408	-	99	83.260	ENSTTRG00000006312	-	99	83.260	Tursiops_truncatus
ENSMNEG00000016408	-	99	86.703	ENSUMAG00000016401	-	99	86.703	Ursus_maritimus
ENSMNEG00000016408	-	99	84.158	ENSVPAG00000003157	-	99	84.158	Vicugna_pacos
ENSMNEG00000016408	-	99	54.436	ENSXETG00000025924	rad54b	99	59.375	Xenopus_tropicalis
ENSMNEG00000016408	-	99	54.923	ENSXMAG00000013141	rad54b	99	54.923	Xiphophorus_maculatus