EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000019236 (Gene tree)
Gene ID: 105467849
Gene Symbol: -
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 55951 bases
Position: chrKQ007336.1:12497518-12553468
Accession: 105467849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000004136	MMR_HSR1	PF01926.23	1.5e-08	1	1
ENSMNEP00000004132	MMR_HSR1	PF01926.23	6.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000021020	-	6025	XM_011717612	ENSMNEP00000004132	1016 (aa)	XP_011715914	A0A2K6AY92
ENSMNET00000021032	-	1422	-	ENSMNEP00000004136	473 (aa)	-	A0A2K6AYA8

Gene Model

Click here to download ENSMNEG00000019236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000019236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000019236	-	63	35.570	ENSMNEG00000031951	EHD4	55	35.570
ENSMNEG00000019236	-	74	33.429	ENSMNEG00000041202	EHD3	69	32.680
ENSMNEG00000019236	-	77	33.699	ENSMNEG00000031673	EHD1	67	33.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000019236	-	100	96.242	ENSG00000185739	SRL	100	100.000	Homo_sapiens
ENSMNEG00000019236	-	97	81.223	ENSAPOG00000018093	srl	100	82.658	Acanthochromis_polyacanthus
ENSMNEG00000019236	-	93	76.018	ENSAPOG00000012432	SRL	98	74.664	Acanthochromis_polyacanthus
ENSMNEG00000019236	-	97	96.943	ENSAMEG00000010862	SRL	99	62.262	Ailuropoda_melanoleuca
ENSMNEG00000019236	-	93	83.032	ENSACIG00000015799	srl	98	83.032	Amphilophus_citrinellus
ENSMNEG00000019236	-	94	75.225	ENSACIG00000015419	SRL	99	75.395	Amphilophus_citrinellus
ENSMNEG00000019236	-	97	73.638	ENSAOCG00000017049	SRL	99	73.638	Amphiprion_ocellaris
ENSMNEG00000019236	-	92	83.410	ENSAOCG00000007574	srl	100	83.410	Amphiprion_ocellaris
ENSMNEG00000019236	-	97	81.441	ENSAPEG00000006911	srl	97	81.441	Amphiprion_percula
ENSMNEG00000019236	-	97	69.869	ENSAPEG00000006533	SRL	99	69.869	Amphiprion_percula
ENSMNEG00000019236	-	93	73.407	ENSATEG00000009643	SRL	52	73.407	Anabas_testudineus
ENSMNEG00000019236	-	93	83.258	ENSATEG00000024315	srl	97	81.223	Anabas_testudineus
ENSMNEG00000019236	-	93	89.845	ENSACAG00000016380	SRL	89	86.186	Anolis_carolinensis
ENSMNEG00000019236	-	93	72.747	ENSACLG00000024674	SRL	57	72.747	Astatotilapia_calliptera
ENSMNEG00000019236	-	97	81.004	ENSACLG00000027685	srl	97	83.032	Astatotilapia_calliptera
ENSMNEG00000019236	-	97	81.385	ENSAMXG00000018789	srl	91	81.385	Astyanax_mexicanus
ENSMNEG00000019236	-	88	77.831	ENSAMXG00000038693	SRL	100	73.510	Astyanax_mexicanus
ENSMNEG00000019236	-	96	96.018	ENSBTAG00000001078	SRL	99	84.364	Bos_taurus
ENSMNEG00000019236	-	100	95.407	ENSCJAG00000019750	SRL	100	95.407	Callithrix_jacchus
ENSMNEG00000019236	-	99	94.681	ENSCAFG00000019233	SRL	99	85.714	Canis_familiaris
ENSMNEG00000019236	-	96	96.909	ENSCAFG00020025024	SRL	98	76.807	Canis_lupus_dingo
ENSMNEG00000019236	-	98	95.238	ENSCHIG00000017927	SRL	98	82.639	Capra_hircus
ENSMNEG00000019236	-	100	94.154	ENSTSYG00000007919	SRL	100	98.608	Carlito_syrichta
ENSMNEG00000019236	-	97	96.095	ENSCPOG00000012643	SRL	98	96.095	Cavia_porcellus
ENSMNEG00000019236	-	100	89.770	ENSCCAG00000032646	SRL	100	99.472	Cebus_capucinus
ENSMNEG00000019236	-	100	96.242	ENSCATG00000032227	-	100	96.242	Cercocebus_atys
ENSMNEG00000019236	-	97	95.879	ENSCLAG00000016242	SRL	98	95.879	Chinchilla_lanigera
ENSMNEG00000019236	-	97	98.690	ENSCSAG00000009635	-	100	93.701	Chlorocebus_sabaeus
ENSMNEG00000019236	-	81	97.662	ENSCHOG00000001618	SRL	89	97.662	Choloepus_hoffmanni
ENSMNEG00000019236	-	96	93.523	ENSCPBG00000026371	SRL	97	88.699	Chrysemys_picta_bellii
ENSMNEG00000019236	-	92	58.756	ENSCING00000005231	-	94	58.865	Ciona_intestinalis
ENSMNEG00000019236	-	100	96.033	ENSCANG00000035872	SRL	100	100.000	Colobus_angolensis_palliatus
ENSMNEG00000019236	-	96	96.681	ENSCGRG00001016630	Srl	98	95.662	Cricetulus_griseus_chok1gshd
ENSMNEG00000019236	-	96	96.681	ENSCGRG00000005458	Srl	98	95.662	Cricetulus_griseus_crigri
ENSMNEG00000019236	-	97	81.223	ENSCSEG00000016151	srl	97	81.223	Cynoglossus_semilaevis
ENSMNEG00000019236	-	97	70.690	ENSCSEG00000011866	SRL	93	70.690	Cynoglossus_semilaevis
ENSMNEG00000019236	-	93	74.779	ENSCVAG00000022465	SRL	60	74.779	Cyprinodon_variegatus
ENSMNEG00000019236	-	97	81.699	ENSCVAG00000003513	srl	99	81.699	Cyprinodon_variegatus
ENSMNEG00000019236	-	80	76.562	ENSDARG00000112959	CABZ01072309.1	100	76.562	Danio_rerio
ENSMNEG00000019236	-	93	84.842	ENSDARG00000104587	srl	98	82.135	Danio_rerio
ENSMNEG00000019236	-	96	97.572	ENSDNOG00000011643	SRL	100	80.291	Dasypus_novemcinctus
ENSMNEG00000019236	-	97	95.445	ENSDORG00000014807	Srl	98	95.445	Dipodomys_ordii
ENSMNEG00000019236	-	77	65.508	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSMNEG00000019236	-	96	96.460	ENSEASG00005000942	SRL	99	74.348	Equus_asinus_asinus
ENSMNEG00000019236	-	96	96.460	ENSECAG00000024219	SRL	96	96.460	Equus_caballus
ENSMNEG00000019236	-	97	79.070	ENSELUG00000015616	srl	97	79.070	Esox_lucius
ENSMNEG00000019236	-	100	93.446	ENSFCAG00000022075	SRL	100	93.446	Felis_catus
ENSMNEG00000019236	-	96	90.265	ENSFALG00000004328	SRL	91	69.242	Ficedula_albicollis
ENSMNEG00000019236	-	97	96.732	ENSFDAG00000006199	SRL	97	96.732	Fukomys_damarensis
ENSMNEG00000019236	-	93	75.339	ENSFHEG00000011854	SRL	98	76.417	Fundulus_heteroclitus
ENSMNEG00000019236	-	93	82.579	ENSFHEG00000011239	srl	98	79.870	Fundulus_heteroclitus
ENSMNEG00000019236	-	93	81.678	ENSGMOG00000014954	srl	99	81.678	Gadus_morhua
ENSMNEG00000019236	-	97	89.716	ENSGALG00000038884	SRL	97	89.716	Gallus_gallus
ENSMNEG00000019236	-	93	76.244	ENSGAFG00000016984	SRL	98	76.244	Gambusia_affinis
ENSMNEG00000019236	-	97	80.828	ENSGAFG00000000010	srl	99	80.828	Gambusia_affinis
ENSMNEG00000019236	-	93	80.795	ENSGACG00000011332	srl	99	80.795	Gasterosteus_aculeatus
ENSMNEG00000019236	-	96	91.593	ENSGAGG00000015590	SRL	69	68.600	Gopherus_agassizii
ENSMNEG00000019236	-	100	96.242	ENSGGOG00000011312	-	100	96.242	Gorilla_gorilla
ENSMNEG00000019236	-	97	81.004	ENSHBUG00000007581	srl	97	83.032	Haplochromis_burtoni
ENSMNEG00000019236	-	93	72.527	ENSHBUG00000015710	SRL	57	72.527	Haplochromis_burtoni
ENSMNEG00000019236	-	97	96.746	ENSHGLG00000015271	SRL	98	96.746	Heterocephalus_glaber_female
ENSMNEG00000019236	-	97	96.746	ENSHGLG00100019378	SRL	98	96.746	Heterocephalus_glaber_male
ENSMNEG00000019236	-	97	80.786	ENSHCOG00000008687	srl	98	82.805	Hippocampus_comes
ENSMNEG00000019236	-	95	72.331	ENSHCOG00000001012	SRL	51	72.331	Hippocampus_comes
ENSMNEG00000019236	-	97	80.349	ENSIPUG00000012513	srl	97	80.349	Ictalurus_punctatus
ENSMNEG00000019236	-	92	70.183	ENSIPUG00000011609	SRL	95	69.037	Ictalurus_punctatus
ENSMNEG00000019236	-	97	96.095	ENSSTOG00000021151	-	98	96.095	Ictidomys_tridecemlineatus
ENSMNEG00000019236	-	97	95.445	ENSJJAG00000016400	Srl	98	95.445	Jaculus_jaculus
ENSMNEG00000019236	-	95	80.984	ENSKMAG00000014115	srl	93	84.561	Kryptolebias_marmoratus
ENSMNEG00000019236	-	93	76.417	ENSKMAG00000019537	SRL	100	76.417	Kryptolebias_marmoratus
ENSMNEG00000019236	-	97	80.786	ENSLBEG00000026643	srl	97	81.004	Labrus_bergylta
ENSMNEG00000019236	-	97	74.292	ENSLBEG00000013811	SRL	99	74.074	Labrus_bergylta
ENSMNEG00000019236	-	96	85.210	ENSLACG00000002825	SRL	100	85.210	Latimeria_chalumnae
ENSMNEG00000019236	-	99	82.766	ENSLOCG00000002644	srl	99	82.766	Lepisosteus_oculatus
ENSMNEG00000019236	-	97	96.061	ENSLAFG00000006329	SRL	98	78.404	Loxodonta_africana
ENSMNEG00000019236	-	91	100.000	ENSMFAG00000037383	SRL	100	100.000	Macaca_fascicularis
ENSMNEG00000019236	-	100	88.309	ENSMLEG00000032156	SRL	100	88.309	Mandrillus_leucophaeus
ENSMNEG00000019236	-	93	74.009	ENSMAMG00000013756	SRL	53	73.904	Mastacembelus_armatus
ENSMNEG00000019236	-	93	83.484	ENSMAMG00000023322	srl	99	80.472	Mastacembelus_armatus
ENSMNEG00000019236	-	97	81.004	ENSMZEG00005004548	srl	97	83.032	Maylandia_zebra
ENSMNEG00000019236	-	93	72.747	ENSMZEG00005004010	SRL	62	67.583	Maylandia_zebra
ENSMNEG00000019236	-	97	88.034	ENSMGAG00000009342	SRL	98	90.000	Meleagris_gallopavo
ENSMNEG00000019236	-	96	96.468	ENSMICG00000032307	SRL	98	95.455	Microcebus_murinus
ENSMNEG00000019236	-	97	95.445	ENSMOCG00000008208	Srl	98	95.445	Microtus_ochrogaster
ENSMNEG00000019236	-	93	82.579	ENSMMOG00000013970	srl	98	82.579	Mola_mola
ENSMNEG00000019236	-	93	72.747	ENSMMOG00000021572	SRL	99	72.747	Mola_mola
ENSMNEG00000019236	-	97	94.143	ENSMODG00000016380	-	92	89.109	Monodelphis_domestica
ENSMNEG00000019236	-	95	82.222	ENSMALG00000005039	srl	99	82.222	Monopterus_albus
ENSMNEG00000019236	-	89	76.134	ENSMALG00000000670	SRL	98	75.359	Monopterus_albus
ENSMNEG00000019236	-	96	96.468	MGP_CAROLIEiJ_G0020400	Srl	98	95.445	Mus_caroli
ENSMNEG00000019236	-	96	96.468	ENSMUSG00000022519	Srl	98	95.445	Mus_musculus
ENSMNEG00000019236	-	96	96.247	MGP_PahariEiJ_G0016108	Srl	100	65.370	Mus_pahari
ENSMNEG00000019236	-	96	96.468	MGP_SPRETEiJ_G0021294	Srl	98	95.445	Mus_spretus
ENSMNEG00000019236	-	96	96.689	ENSMPUG00000015025	SRL	97	88.398	Mustela_putorius_furo
ENSMNEG00000019236	-	98	94.409	ENSMLUG00000030733	SRL	99	81.970	Myotis_lucifugus
ENSMNEG00000019236	-	96	96.903	ENSNGAG00000019741	Srl	98	95.879	Nannospalax_galili
ENSMNEG00000019236	-	93	72.747	ENSNBRG00000002422	SRL	62	69.038	Neolamprologus_brichardi
ENSMNEG00000019236	-	97	81.004	ENSNBRG00000023775	srl	97	81.360	Neolamprologus_brichardi
ENSMNEG00000019236	-	100	89.353	ENSNLEG00000029051	SRL	100	89.353	Nomascus_leucogenys
ENSMNEG00000019236	-	97	89.083	ENSOPRG00000000477	-	100	76.923	Ochotona_princeps
ENSMNEG00000019236	-	97	96.312	ENSODEG00000013256	SRL	98	96.312	Octodon_degus
ENSMNEG00000019236	-	97	80.870	ENSONIG00000005192	srl	99	79.487	Oreochromis_niloticus
ENSMNEG00000019236	-	96	97.130	ENSOCUG00000025140	SRL	93	85.790	Oryctolagus_cuniculus
ENSMNEG00000019236	-	95	81.153	ENSORLG00000008291	srl	92	84.794	Oryzias_latipes
ENSMNEG00000019236	-	97	72.926	ENSORLG00000015064	SRL	100	72.926	Oryzias_latipes
ENSMNEG00000019236	-	97	73.144	ENSORLG00020018173	SRL	100	73.144	Oryzias_latipes_hni
ENSMNEG00000019236	-	95	80.931	ENSORLG00020019784	srl	79	84.755	Oryzias_latipes_hni
ENSMNEG00000019236	-	97	73.362	ENSORLG00015019063	SRL	100	73.362	Oryzias_latipes_hsok
ENSMNEG00000019236	-	95	80.488	ENSORLG00015009342	srl	97	78.013	Oryzias_latipes_hsok
ENSMNEG00000019236	-	95	80.710	ENSOMEG00000010006	srl	98	82.045	Oryzias_melastigma
ENSMNEG00000019236	-	94	72.648	ENSOMEG00000005682	SRL	53	72.549	Oryzias_melastigma
ENSMNEG00000019236	-	96	95.806	ENSOGAG00000029266	SRL	99	83.160	Otolemur_garnettii
ENSMNEG00000019236	-	98	95.238	ENSOARG00000003074	SRL	84	94.967	Ovis_aries
ENSMNEG00000019236	-	100	95.825	ENSPPAG00000024919	-	100	99.768	Pan_paniscus
ENSMNEG00000019236	-	100	93.658	ENSPPRG00000010274	SRL	100	97.680	Panthera_pardus
ENSMNEG00000019236	-	100	93.658	ENSPTIG00000015162	SRL	100	97.680	Panthera_tigris_altaica
ENSMNEG00000019236	-	100	96.033	ENSPTRG00000007712	SRL	100	99.768	Pan_troglodytes
ENSMNEG00000019236	-	98	99.570	ENSPANG00000013804	SRL	100	99.570	Papio_anubis
ENSMNEG00000019236	-	97	83.007	ENSPKIG00000006405	srl	97	83.007	Paramormyrops_kingsleyae
ENSMNEG00000019236	-	99	73.885	ENSPKIG00000024974	SRL	92	73.885	Paramormyrops_kingsleyae
ENSMNEG00000019236	-	98	89.032	ENSPSIG00000008586	SRL	99	56.158	Pelodiscus_sinensis
ENSMNEG00000019236	-	93	72.624	ENSPMGG00000023505	-	99	72.072	Periophthalmus_magnuspinnatus
ENSMNEG00000019236	-	95	83.556	ENSPMGG00000021081	srl	97	83.556	Periophthalmus_magnuspinnatus
ENSMNEG00000019236	-	96	96.460	ENSPEMG00000015842	Srl	98	95.445	Peromyscus_maniculatus_bairdii
ENSMNEG00000019236	-	89	67.431	ENSPMAG00000004786	srl	99	67.202	Petromyzon_marinus
ENSMNEG00000019236	-	96	95.354	ENSPCIG00000012128	SRL	99	95.354	Phascolarctos_cinereus
ENSMNEG00000019236	-	97	79.149	ENSPFOG00000011408	srl	96	79.149	Poecilia_formosa
ENSMNEG00000019236	-	93	75.792	ENSPLAG00000002932	SRL	98	74.830	Poecilia_latipinna
ENSMNEG00000019236	-	97	80.610	ENSPLAG00000008017	srl	99	80.610	Poecilia_latipinna
ENSMNEG00000019236	-	93	73.523	ENSPMEG00000005890	SRL	59	73.846	Poecilia_mexicana
ENSMNEG00000019236	-	97	80.610	ENSPMEG00000006745	srl	99	80.610	Poecilia_mexicana
ENSMNEG00000019236	-	95	81.596	ENSPREG00000007751	srl	100	81.596	Poecilia_reticulata
ENSMNEG00000019236	-	93	76.923	ENSPREG00000000315	SRL	98	75.964	Poecilia_reticulata
ENSMNEG00000019236	-	89	100.000	ENSPPYG00000007053	SRL	98	100.000	Pongo_abelii
ENSMNEG00000019236	-	96	95.354	ENSPCAG00000003378	-	86	91.165	Procavia_capensis
ENSMNEG00000019236	-	97	95.671	ENSPCOG00000023135	SRL	100	97.912	Propithecus_coquereli
ENSMNEG00000019236	-	96	97.130	ENSPVAG00000006586	SRL	100	78.495	Pteropus_vampyrus
ENSMNEG00000019236	-	93	72.747	ENSPNYG00000003423	SRL	57	72.747	Pundamilia_nyererei
ENSMNEG00000019236	-	97	81.004	ENSPNYG00000001200	srl	97	83.032	Pundamilia_nyererei
ENSMNEG00000019236	-	95	75.056	ENSPNAG00000007361	-	92	75.056	Pygocentrus_nattereri
ENSMNEG00000019236	-	97	80.568	ENSPNAG00000023106	srl	97	80.568	Pygocentrus_nattereri
ENSMNEG00000019236	-	97	94.978	ENSRNOG00000005269	Srl	100	81.742	Rattus_norvegicus
ENSMNEG00000019236	-	97	98.690	ENSRBIG00000042358	SRL	100	73.503	Rhinopithecus_bieti
ENSMNEG00000019236	-	100	95.407	ENSSBOG00000029273	SRL	100	95.407	Saimiri_boliviensis_boliviensis
ENSMNEG00000019236	-	96	95.374	ENSSHAG00000011715	-	85	93.709	Sarcophilus_harrisii
ENSMNEG00000019236	-	93	77.149	ENSSFOG00015021327	SRL	51	76.264	Scleropages_formosus
ENSMNEG00000019236	-	97	82.932	ENSSFOG00015009773	srl	98	82.932	Scleropages_formosus
ENSMNEG00000019236	-	93	73.523	ENSSMAG00000002232	SRL	50	72.527	Scophthalmus_maximus
ENSMNEG00000019236	-	93	82.579	ENSSMAG00000016274	srl	97	82.579	Scophthalmus_maximus
ENSMNEG00000019236	-	93	74.833	ENSSDUG00000009161	SRL	98	75.000	Seriola_dumerili
ENSMNEG00000019236	-	93	83.484	ENSSDUG00000010808	srl	97	83.484	Seriola_dumerili
ENSMNEG00000019236	-	93	83.484	ENSSLDG00000022024	srl	95	83.484	Seriola_lalandi_dorsalis
ENSMNEG00000019236	-	93	74.398	ENSSLDG00000014601	SRL	99	74.561	Seriola_lalandi_dorsalis
ENSMNEG00000019236	-	96	89.625	ENSSPUG00000016859	SRL	99	89.625	Sphenodon_punctatus
ENSMNEG00000019236	-	93	75.737	ENSSPAG00000014254	SRL	98	74.773	Stegastes_partitus
ENSMNEG00000019236	-	97	81.659	ENSSPAG00000019105	srl	97	81.659	Stegastes_partitus
ENSMNEG00000019236	-	96	96.035	ENSSSCG00000007949	SRL	99	96.875	Sus_scrofa
ENSMNEG00000019236	-	96	90.044	ENSTGUG00000003951	-	99	90.044	Taeniopygia_guttata
ENSMNEG00000019236	-	77	91.989	ENSTGUG00000016121	-	96	92.816	Taeniopygia_guttata
ENSMNEG00000019236	-	97	81.004	ENSTRUG00000006005	srl	97	81.004	Takifugu_rubripes
ENSMNEG00000019236	-	89	75.179	ENSTRUG00000013310	SRL	55	75.179	Takifugu_rubripes
ENSMNEG00000019236	-	95	81.375	ENSTNIG00000009739	srl	97	81.004	Tetraodon_nigroviridis
ENSMNEG00000019236	-	93	96.364	ENSTTRG00000002709	-	69	96.364	Tursiops_truncatus
ENSMNEG00000019236	-	96	96.689	ENSUAMG00000005701	SRL	98	83.133	Ursus_americanus
ENSMNEG00000019236	-	96	96.909	ENSUMAG00000002574	SRL	98	83.305	Ursus_maritimus
ENSMNEG00000019236	-	96	96.909	ENSVVUG00000016331	-	87	86.176	Vulpes_vulpes
ENSMNEG00000019236	-	97	88.403	ENSXETG00000017313	srl	100	88.938	Xenopus_tropicalis
ENSMNEG00000019236	-	89	84.561	ENSXCOG00000010424	srl	97	84.561	Xiphophorus_couchianus
ENSMNEG00000019236	-	95	74.945	ENSXCOG00000014584	SRL	100	74.945	Xiphophorus_couchianus
ENSMNEG00000019236	-	94	82.697	ENSXMAG00000004625	srl	93	81.223	Xiphophorus_maculatus
ENSMNEG00000019236	-	93	73.846	ENSXMAG00000027598	SRL	62	74.505	Xiphophorus_maculatus