EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000023839 (Gene tree)
Gene ID: 105473933
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 12645 bases
Position: chrKQ008994.1:11384802-11397446
Accession: 105473933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000005248	RRM_1	PF00076.22	4.6e-58	1	4
ENSMNEP00000005248	RRM_1	PF00076.22	4.6e-58	2	4
ENSMNEP00000005248	RRM_1	PF00076.22	4.6e-58	3	4
ENSMNEP00000005248	RRM_1	PF00076.22	4.6e-58	4	4
ENSMNEP00000005239	RRM_1	PF00076.22	6.6e-58	1	4
ENSMNEP00000005239	RRM_1	PF00076.22	6.6e-58	2	4
ENSMNEP00000005239	RRM_1	PF00076.22	6.6e-58	3	4
ENSMNEP00000005239	RRM_1	PF00076.22	6.6e-58	4	4
ENSMNEP00000005257	RRM_1	PF00076.22	7.8e-40	1	2
ENSMNEP00000005257	RRM_1	PF00076.22	7.8e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000026214	NCL-203	1437	-	ENSMNEP00000005257	478 (aa)	-	A0A2K6B1F9
ENSMNET00000026126	NCL-201	5150	-	ENSMNEP00000005239	736 (aa)	-	A0A2K6B1F3
ENSMNET00000026168	NCL-202	5003	XM_011728143	ENSMNEP00000005248	687 (aa)	XP_011726445	A0A2K6B1H7

Gene Model

Click here to download ENSMNEG00000023839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000023839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000023839	NCL	99	100.000	ENSG00000115053	NCL	100	98.013	Homo_sapiens
ENSMNEG00000023839	NCL	64	97.494	ENSAMEG00000016289	NCL	79	98.636	Ailuropoda_melanoleuca
ENSMNEG00000023839	NCL	99	77.778	ENSANAG00000024378	-	85	88.636	Aotus_nancymaae
ENSMNEG00000023839	NCL	100	93.952	ENSANAG00000035814	-	100	93.952	Aotus_nancymaae
ENSMNEG00000023839	NCL	77	92.642	ENSBTAG00000026909	-	96	92.642	Bos_taurus
ENSMNEG00000023839	NCL	91	90.164	ENSBTAG00000050728	-	89	90.164	Bos_taurus
ENSMNEG00000023839	NCL	89	92.157	ENSBTAG00000051320	-	73	90.141	Bos_taurus
ENSMNEG00000023839	NCL	93	82.500	ENSBTAG00000016174	NCL	58	97.727	Bos_taurus
ENSMNEG00000023839	NCL	100	93.427	ENSCJAG00000013538	NCL	98	100.000	Callithrix_jacchus
ENSMNEG00000023839	NCL	100	89.371	ENSCAFG00000011037	NCL	62	93.919	Canis_familiaris
ENSMNEG00000023839	NCL	73	95.040	ENSCAFG00020023145	NCL	65	93.919	Canis_lupus_dingo
ENSMNEG00000023839	NCL	91	79.661	ENSCHIG00000026149	-	93	81.048	Capra_hircus
ENSMNEG00000023839	NCL	91	96.460	ENSCHIG00000021052	-	64	96.503	Capra_hircus
ENSMNEG00000023839	NCL	91	65.764	ENSCHIG00000012143	-	92	66.769	Capra_hircus
ENSMNEG00000023839	NCL	73	93.056	ENSCHIG00000010894	-	76	92.460	Capra_hircus
ENSMNEG00000023839	NCL	90	76.206	ENSTSYG00000036886	-	91	76.341	Carlito_syrichta
ENSMNEG00000023839	NCL	95	85.461	ENSTSYG00000029779	-	94	86.702	Carlito_syrichta
ENSMNEG00000023839	NCL	87	90.283	ENSTSYG00000004355	-	62	93.891	Carlito_syrichta
ENSMNEG00000023839	NCL	94	97.500	ENSCAPG00000009405	NCL	51	96.818	Cavia_aperea
ENSMNEG00000023839	NCL	94	97.500	ENSCPOG00000001034	NCL	62	89.367	Cavia_porcellus
ENSMNEG00000023839	NCL	100	93.820	ENSCCAG00000021040	-	100	93.820	Cebus_capucinus
ENSMNEG00000023839	NCL	86	89.447	ENSCCAG00000000551	-	93	89.552	Cebus_capucinus
ENSMNEG00000023839	NCL	99	100.000	ENSCATG00000037033	NCL	100	96.343	Cercocebus_atys
ENSMNEG00000023839	NCL	100	91.558	ENSCLAG00000013080	NCL	62	91.855	Chinchilla_lanigera
ENSMNEG00000023839	NCL	64	99.773	ENSCSAG00000006660	NCL	95	99.773	Chlorocebus_sabaeus
ENSMNEG00000023839	NCL	64	76.256	ENSCHOG00000012860	NCL	88	75.000	Choloepus_hoffmanni
ENSMNEG00000023839	NCL	62	100.000	ENSCANG00000036756	NCL	94	100.000	Colobus_angolensis_palliatus
ENSMNEG00000023839	NCL	64	84.615	ENSCGRG00001024315	-	54	94.091	Cricetulus_griseus_chok1gshd
ENSMNEG00000023839	NCL	84	79.098	ENSCGRG00001022350	-	57	83.182	Cricetulus_griseus_chok1gshd
ENSMNEG00000023839	NCL	80	87.854	ENSCGRG00000017894	-	78	94.091	Cricetulus_griseus_crigri
ENSMNEG00000023839	NCL	92	66.462	ENSCGRG00000000507	-	93	65.138	Cricetulus_griseus_crigri
ENSMNEG00000023839	NCL	64	92.063	ENSDNOG00000010783	-	92	84.709	Dasypus_novemcinctus
ENSMNEG00000023839	NCL	100	73.492	ENSDNOG00000046347	-	99	70.407	Dasypus_novemcinctus
ENSMNEG00000023839	NCL	55	84.433	ENSDORG00000012513	-	91	77.519	Dipodomys_ordii
ENSMNEG00000023839	NCL	59	69.643	ENSDORG00000023596	-	92	69.062	Dipodomys_ordii
ENSMNEG00000023839	NCL	55	90.451	ENSETEG00000014756	-	86	90.501	Echinops_telfairi
ENSMNEG00000023839	NCL	55	90.789	ENSETEG00000018937	-	85	80.298	Echinops_telfairi
ENSMNEG00000023839	NCL	64	61.937	ENSETEG00000008553	-	88	62.077	Echinops_telfairi
ENSMNEG00000023839	NCL	72	69.048	ENSETEG00000008139	-	69	68.720	Echinops_telfairi
ENSMNEG00000023839	NCL	92	98.571	ENSEASG00005008488	NCL	100	90.737	Equus_asinus_asinus
ENSMNEG00000023839	NCL	73	93.426	ENSECAG00000021868	NCL	80	98.182	Equus_caballus
ENSMNEG00000023839	NCL	55	91.821	ENSEEUG00000005913	NCL	62	86.199	Erinaceus_europaeus
ENSMNEG00000023839	NCL	79	94.615	ENSFCAG00000027622	NCL	78	99.091	Felis_catus
ENSMNEG00000023839	NCL	95	97.857	ENSFDAG00000014291	NCL	62	91.855	Fukomys_damarensis
ENSMNEG00000023839	NCL	99	100.000	ENSGGOG00000004300	NCL	99	98.954	Gorilla_gorilla
ENSMNEG00000023839	NCL	87	66.507	ENSHGLG00000005133	-	93	74.825	Heterocephalus_glaber_female
ENSMNEG00000023839	NCL	95	97.857	ENSHGLG00000002031	-	62	90.498	Heterocephalus_glaber_female
ENSMNEG00000023839	NCL	91	78.145	ENSHGLG00000011069	-	92	79.030	Heterocephalus_glaber_female
ENSMNEG00000023839	NCL	82	82.576	ENSHGLG00100000745	-	57	90.909	Heterocephalus_glaber_male
ENSMNEG00000023839	NCL	95	97.500	ENSHGLG00100014537	-	70	90.837	Heterocephalus_glaber_male
ENSMNEG00000023839	NCL	96	87.786	ENSJJAG00000016165	Ncl	93	77.573	Jaculus_jaculus
ENSMNEG00000023839	NCL	91	76.236	ENSLAFG00000013061	NCL	91	75.358	Loxodonta_africana
ENSMNEG00000023839	NCL	100	100.000	ENSMFAG00000040385	NCL	100	100.000	Macaca_fascicularis
ENSMNEG00000023839	NCL	100	100.000	ENSMMUG00000018094	NCL	98	100.000	Macaca_mulatta
ENSMNEG00000023839	NCL	99	100.000	ENSMLEG00000028935	NCL	100	96.484	Mandrillus_leucophaeus
ENSMNEG00000023839	NCL	73	94.611	ENSMICG00000002538	-	62	93.651	Microcebus_murinus
ENSMNEG00000023839	NCL	85	74.860	ENSMICG00000029975	-	86	82.979	Microcebus_murinus
ENSMNEG00000023839	NCL	64	86.319	MGP_CAROLIEiJ_G0014362	Ncl	74	89.091	Mus_caroli
ENSMNEG00000023839	NCL	97	86.319	ENSMUSG00000026234	Ncl	74	89.091	Mus_musculus
ENSMNEG00000023839	NCL	78	82.857	MGP_PahariEiJ_G0027599	Ncl	75	89.545	Mus_pahari
ENSMNEG00000023839	NCL	96	86.319	MGP_SPRETEiJ_G0015164	Ncl	74	89.091	Mus_spretus
ENSMNEG00000023839	NCL	100	92.532	ENSMLUG00000014547	NCL	62	94.331	Myotis_lucifugus
ENSMNEG00000023839	NCL	78	88.306	ENSNGAG00000002454	-	74	95.000	Nannospalax_galili
ENSMNEG00000023839	NCL	74	75.630	ENSNGAG00000006188	-	54	72.559	Nannospalax_galili
ENSMNEG00000023839	NCL	94	81.481	ENSNLEG00000014107	-	95	82.746	Nomascus_leucogenys
ENSMNEG00000023839	NCL	59	91.786	ENSODEG00000003281	-	61	86.395	Octodon_degus
ENSMNEG00000023839	NCL	58	70.144	ENSODEG00000007803	-	90	63.978	Octodon_degus
ENSMNEG00000023839	NCL	100	68.828	ENSODEG00000002441	-	92	85.593	Octodon_degus
ENSMNEG00000023839	NCL	83	94.037	ENSODEG00000002748	-	89	94.064	Octodon_degus
ENSMNEG00000023839	NCL	95	95.714	ENSOCUG00000004312	NCL	100	82.609	Oryctolagus_cuniculus
ENSMNEG00000023839	NCL	64	90.991	ENSOARG00000020709	-	65	90.090	Ovis_aries
ENSMNEG00000023839	NCL	58	95.413	ENSOARG00000013710	-	73	88.435	Ovis_aries
ENSMNEG00000023839	NCL	87	86.458	ENSOARG00000013270	-	100	90.110	Ovis_aries
ENSMNEG00000023839	NCL	75	72.763	ENSOARG00000004072	-	92	71.478	Ovis_aries
ENSMNEG00000023839	NCL	100	99.163	ENSPPAG00000011619	NCL	99	99.163	Pan_paniscus
ENSMNEG00000023839	NCL	86	99.286	ENSPPRG00000012603	NCL	62	93.018	Panthera_pardus
ENSMNEG00000023839	NCL	83	94.615	ENSPTIG00000010393	NCL	62	93.002	Panthera_tigris_altaica
ENSMNEG00000023839	NCL	99	100.000	ENSPTRG00000013025	NCL	99	98.954	Pan_troglodytes
ENSMNEG00000023839	NCL	99	100.000	ENSPANG00000010292	NCL	100	96.624	Papio_anubis
ENSMNEG00000023839	NCL	99	100.000	ENSPPYG00000013265	NCL	92	86.128	Pongo_abelii
ENSMNEG00000023839	NCL	91	98.182	ENSPCOG00000003051	-	62	95.011	Propithecus_coquereli
ENSMNEG00000023839	NCL	91	86.531	ENSPCOG00000004160	-	92	93.636	Propithecus_coquereli
ENSMNEG00000023839	NCL	73	94.012	ENSPVAG00000000297	NCL	61	92.063	Pteropus_vampyrus
ENSMNEG00000023839	NCL	64	85.068	ENSRNOG00000018273	Ncl	75	93.636	Rattus_norvegicus
ENSMNEG00000023839	NCL	68	99.077	ENSRBIG00000035396	-	86	99.077	Rhinopithecus_bieti
ENSMNEG00000023839	NCL	100	94.092	ENSRBIG00000037525	-	91	92.767	Rhinopithecus_bieti
ENSMNEG00000023839	NCL	99	98.561	ENSRROG00000036103	-	99	93.648	Rhinopithecus_roxellana
ENSMNEG00000023839	NCL	100	99.165	ENSRROG00000028756	-	100	99.165	Rhinopithecus_roxellana
ENSMNEG00000023839	NCL	100	84.736	ENSSBOG00000027549	-	94	90.888	Saimiri_boliviensis_boliviensis
ENSMNEG00000023839	NCL	90	75.342	ENSSBOG00000023094	-	88	72.010	Saimiri_boliviensis_boliviensis
ENSMNEG00000023839	NCL	91	89.433	ENSSBOG00000029193	-	92	90.965	Saimiri_boliviensis_boliviensis
ENSMNEG00000023839	NCL	73	97.727	ENSSSCG00000016275	NCL	62	91.353	Sus_scrofa
ENSMNEG00000023839	NCL	81	76.786	ENSTBEG00000002469	-	70	80.533	Tupaia_belangeri
ENSMNEG00000023839	NCL	66	90.722	ENSTBEG00000001546	-	62	82.353	Tupaia_belangeri
ENSMNEG00000023839	NCL	100	96.454	ENSTTRG00000009094	NCL	66	96.454	Tursiops_truncatus
ENSMNEG00000023839	NCL	79	98.929	ENSUAMG00000005639	NCL	100	94.036	Ursus_americanus
ENSMNEG00000023839	NCL	64	97.494	ENSUMAG00000015789	NCL	62	93.439	Ursus_maritimus
ENSMNEG00000023839	NCL	85	87.786	ENSVPAG00000001796	NCL	69	88.732	Vicugna_pacos
ENSMNEG00000023839	NCL	94	99.640	ENSVVUG00000025564	NCL	69	90.438	Vulpes_vulpes