EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000027793 (Gene tree)
Gene ID: 105492561
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 196737 bases
Position: chrKQ005480.1:20327111-20523847
Accession: 105492561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000007273	R3H	PF01424.22	2.7e-11	1	1
ENSMNEP00000007224	R3H	PF01424.22	2.9e-11	1	1
ENSMNEP00000007267	R3H	PF01424.22	3.1e-11	1	1
ENSMNEP00000007209	R3H	PF01424.22	3.2e-11	1	1
ENSMNEP00000007253	R3H	PF01424.22	3.2e-11	1	1
ENSMNEP00000007284	R3H	PF01424.22	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000031373	R3HDM1-202	5088	XM_011759792	ENSMNEP00000007224	1014 (aa)	XP_011758094	A0A2K6B735
ENSMNET00000031357	R3HDM1-201	5364	XM_011759782	ENSMNEP00000007209	1099 (aa)	XP_011758084	A0A2K6B720
ENSMNET00000031496	R3HDM1-207	4243	-	ENSMNEP00000007345	445 (aa)	-	A0A2K6B7L1
ENSMNET00000031434	R3HDM1-206	3303	XM_011759783	ENSMNEP00000007284	1100 (aa)	XP_011758085	A0A2K6B786
ENSMNET00000031423	R3HDM1-205	3903	XM_011759787	ENSMNEP00000007273	971 (aa)	XP_011758089	A0A2K6B783
ENSMNET00000031417	R3HDM1-204	3135	XM_011759800	ENSMNEP00000007267	1044 (aa)	XP_011758103	A0A2K6B789
ENSMNET00000031403	R3HDM1-203	4788	XM_011759780	ENSMNEP00000007253	1100 (aa)	XP_011758082	A0A2K6B763

Gene Model

Click here to download ENSMNEG00000027793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000027793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000027793	R3HDM1	99	50.334	ENSMNEG00000025314	R3HDM2	94	57.421
ENSMNEG00000027793	R3HDM1	62	63.323	ENSMNEG00000044015	ARPP21	82	60.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000027793	R3HDM1	100	100.000	ENSG00000048991	R3HDM1	100	98.909	Homo_sapiens
ENSMNEG00000027793	R3HDM1	88	63.467	ENSAPOG00000020850	r3hdm1	92	61.814	Acanthochromis_polyacanthus
ENSMNEG00000027793	R3HDM1	100	97.537	ENSAMEG00000014886	R3HDM1	100	94.923	Ailuropoda_melanoleuca
ENSMNEG00000027793	R3HDM1	88	62.291	ENSAOCG00000005192	r3hdm1	95	61.575	Amphiprion_ocellaris
ENSMNEG00000027793	R3HDM1	87	63.200	ENSAPEG00000016108	r3hdm1	95	63.200	Amphiprion_percula
ENSMNEG00000027793	R3HDM1	87	63.441	ENSATEG00000000232	r3hdm1	87	64.010	Anabas_testudineus
ENSMNEG00000027793	R3HDM1	100	78.952	ENSAPLG00000015231	R3HDM1	100	79.223	Anas_platyrhynchos
ENSMNEG00000027793	R3HDM1	100	84.236	ENSACAG00000001676	R3HDM1	100	76.815	Anolis_carolinensis
ENSMNEG00000027793	R3HDM1	100	99.015	ENSANAG00000035334	R3HDM1	100	98.183	Aotus_nancymaae
ENSMNEG00000027793	R3HDM1	87	62.133	ENSACLG00000027282	r3hdm1	89	68.590	Astatotilapia_calliptera
ENSMNEG00000027793	R3HDM1	100	72.115	ENSAMXG00000012861	R3HDM1	100	60.667	Astyanax_mexicanus
ENSMNEG00000027793	R3HDM1	60	40.058	ENSAMXG00000020587	arpp21	88	38.700	Astyanax_mexicanus
ENSMNEG00000027793	R3HDM1	88	74.684	ENSAMXG00000003536	r3hdm1	89	74.603	Astyanax_mexicanus
ENSMNEG00000027793	R3HDM1	100	95.567	ENSBTAG00000013302	R3HDM1	100	91.205	Bos_taurus
ENSMNEG00000027793	R3HDM1	100	99.015	ENSCJAG00000011718	R3HDM1	100	97.727	Callithrix_jacchus
ENSMNEG00000027793	R3HDM1	100	97.783	ENSCAFG00000005075	R3HDM1	100	95.104	Canis_familiaris
ENSMNEG00000027793	R3HDM1	100	97.783	ENSCAFG00020016119	R3HDM1	100	95.558	Canis_lupus_dingo
ENSMNEG00000027793	R3HDM1	100	95.813	ENSCHIG00000020851	R3HDM1	100	93.926	Capra_hircus
ENSMNEG00000027793	R3HDM1	100	93.103	ENSCPOG00000012784	R3HDM1	100	89.455	Cavia_porcellus
ENSMNEG00000027793	R3HDM1	100	98.276	ENSCCAG00000027199	R3HDM1	100	97.725	Cebus_capucinus
ENSMNEG00000027793	R3HDM1	100	99.507	ENSCATG00000023642	R3HDM1	100	99.455	Cercocebus_atys
ENSMNEG00000027793	R3HDM1	100	95.074	ENSCLAG00000007962	R3HDM1	94	95.425	Chinchilla_lanigera
ENSMNEG00000027793	R3HDM1	100	99.754	ENSCSAG00000016356	R3HDM1	100	96.473	Chlorocebus_sabaeus
ENSMNEG00000027793	R3HDM1	86	93.939	ENSCHOG00000013638	R3HDM1	91	94.118	Choloepus_hoffmanni
ENSMNEG00000027793	R3HDM1	91	91.144	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSMNEG00000027793	R3HDM1	100	99.261	ENSCANG00000034748	R3HDM1	100	98.910	Colobus_angolensis_palliatus
ENSMNEG00000027793	R3HDM1	99	95.813	ENSCGRG00001012357	R3hdm1	97	88.438	Cricetulus_griseus_chok1gshd
ENSMNEG00000027793	R3HDM1	100	95.813	ENSCGRG00000012080	R3hdm1	100	91.030	Cricetulus_griseus_crigri
ENSMNEG00000027793	R3HDM1	81	65.246	ENSCSEG00000008944	r3hdm1	91	57.831	Cynoglossus_semilaevis
ENSMNEG00000027793	R3HDM1	88	60.382	ENSCVAG00000007582	r3hdm1	91	61.067	Cyprinodon_variegatus
ENSMNEG00000027793	R3HDM1	64	35.952	ENSDARG00000061081	arpp21	95	35.131	Danio_rerio
ENSMNEG00000027793	R3HDM1	100	91.517	ENSDNOG00000000771	R3HDM1	100	90.893	Dasypus_novemcinctus
ENSMNEG00000027793	R3HDM1	96	91.892	ENSETEG00000013606	R3HDM1	100	83.485	Echinops_telfairi
ENSMNEG00000027793	R3HDM1	63	46.809	ENSEBUG00000014746	arpp21	97	44.168	Eptatretus_burgeri
ENSMNEG00000027793	R3HDM1	100	98.066	ENSEASG00005007392	R3HDM1	100	95.195	Equus_asinus_asinus
ENSMNEG00000027793	R3HDM1	100	97.537	ENSECAG00000019114	R3HDM1	100	95.467	Equus_caballus
ENSMNEG00000027793	R3HDM1	91	87.061	ENSEEUG00000012589	R3HDM1	91	87.061	Erinaceus_europaeus
ENSMNEG00000027793	R3HDM1	83	77.670	ENSELUG00000004909	R3HDM1	99	55.659	Esox_lucius
ENSMNEG00000027793	R3HDM1	92	53.295	ENSELUG00000014413	r3hdm1	96	53.773	Esox_lucius
ENSMNEG00000027793	R3HDM1	100	97.790	ENSFCAG00000027113	R3HDM1	100	94.560	Felis_catus
ENSMNEG00000027793	R3HDM1	75	73.108	ENSFALG00000013731	R3HDM1	93	66.068	Ficedula_albicollis
ENSMNEG00000027793	R3HDM1	100	95.567	ENSFDAG00000016478	R3HDM1	100	90.033	Fukomys_damarensis
ENSMNEG00000027793	R3HDM1	88	61.337	ENSFHEG00000018713	r3hdm1	100	47.786	Fundulus_heteroclitus
ENSMNEG00000027793	R3HDM1	61	64.565	ENSGMOG00000006042	-	74	65.217	Gadus_morhua
ENSMNEG00000027793	R3HDM1	88	85.948	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSMNEG00000027793	R3HDM1	87	61.333	ENSGAFG00000006203	r3hdm1	89	68.932	Gambusia_affinis
ENSMNEG00000027793	R3HDM1	86	68.269	ENSGACG00000014925	r3hdm1	94	67.155	Gasterosteus_aculeatus
ENSMNEG00000027793	R3HDM1	100	83.824	ENSGAGG00000007840	R3HDM1	100	78.190	Gopherus_agassizii
ENSMNEG00000027793	R3HDM1	100	100.000	ENSGGOG00000008156	R3HDM1	100	98.909	Gorilla_gorilla
ENSMNEG00000027793	R3HDM1	100	95.320	ENSHGLG00000015718	R3HDM1	100	89.701	Heterocephalus_glaber_female
ENSMNEG00000027793	R3HDM1	100	68.812	ENSHGLG00100015374	-	100	73.245	Heterocephalus_glaber_male
ENSMNEG00000027793	R3HDM1	100	95.074	ENSHGLG00100003184	-	94	95.425	Heterocephalus_glaber_male
ENSMNEG00000027793	R3HDM1	87	59.517	ENSHCOG00000013366	r3hdm1	85	67.208	Hippocampus_comes
ENSMNEG00000027793	R3HDM1	82	73.668	ENSIPUG00000001676	R3HDM1	98	58.526	Ictalurus_punctatus
ENSMNEG00000027793	R3HDM1	89	68.615	ENSIPUG00000013629	r3hdm1	95	69.497	Ictalurus_punctatus
ENSMNEG00000027793	R3HDM1	100	96.798	ENSSTOG00000007572	R3HDM1	99	96.863	Ictidomys_tridecemlineatus
ENSMNEG00000027793	R3HDM1	94	85.806	ENSLACG00000005334	R3HDM1	100	71.026	Latimeria_chalumnae
ENSMNEG00000027793	R3HDM1	100	75.787	ENSLOCG00000001641	r3hdm1	100	66.281	Lepisosteus_oculatus
ENSMNEG00000027793	R3HDM1	100	96.305	ENSLAFG00000009065	R3HDM1	100	90.933	Loxodonta_africana
ENSMNEG00000027793	R3HDM1	100	100.000	ENSMFAG00000030331	R3HDM1	100	100.000	Macaca_fascicularis
ENSMNEG00000027793	R3HDM1	100	100.000	ENSMMUG00000009844	R3HDM1	100	99.727	Macaca_mulatta
ENSMNEG00000027793	R3HDM1	100	100.000	ENSMLEG00000043189	R3HDM1	100	99.727	Mandrillus_leucophaeus
ENSMNEG00000027793	R3HDM1	87	62.466	ENSMAMG00000004532	r3hdm1	91	61.391	Mastacembelus_armatus
ENSMNEG00000027793	R3HDM1	88	61.337	ENSMZEG00005003157	r3hdm1	95	60.621	Maylandia_zebra
ENSMNEG00000027793	R3HDM1	100	78.500	ENSMGAG00000012461	R3HDM1	100	78.681	Meleagris_gallopavo
ENSMNEG00000027793	R3HDM1	100	96.305	ENSMAUG00000010315	R3hdm1	100	91.362	Mesocricetus_auratus
ENSMNEG00000027793	R3HDM1	95	92.316	ENSMICG00000042655	-	94	98.366	Microcebus_murinus
ENSMNEG00000027793	R3HDM1	100	96.552	ENSMICG00000005900	-	100	94.027	Microcebus_murinus
ENSMNEG00000027793	R3HDM1	51	84.906	ENSMOCG00000019833	-	100	91.030	Microtus_ochrogaster
ENSMNEG00000027793	R3HDM1	89	87.799	ENSMODG00000000923	R3HDM1	90	86.651	Monodelphis_domestica
ENSMNEG00000027793	R3HDM1	99	60.238	ENSMALG00000009000	r3hdm1	91	60.476	Monopterus_albus
ENSMNEG00000027793	R3HDM1	100	95.074	MGP_CAROLIEiJ_G0014543	R3hdm1	100	94.561	Mus_caroli
ENSMNEG00000027793	R3HDM1	100	95.074	ENSMUSG00000056211	R3hdm1	100	94.561	Mus_musculus
ENSMNEG00000027793	R3HDM1	100	94.828	MGP_PahariEiJ_G0027779	R3hdm1	100	94.561	Mus_pahari
ENSMNEG00000027793	R3HDM1	100	95.074	MGP_SPRETEiJ_G0015350	R3hdm1	100	94.561	Mus_spretus
ENSMNEG00000027793	R3HDM1	100	97.783	ENSMPUG00000002412	R3HDM1	100	94.651	Mustela_putorius_furo
ENSMNEG00000027793	R3HDM1	100	96.059	ENSMLUG00000013824	R3HDM1	100	92.676	Myotis_lucifugus
ENSMNEG00000027793	R3HDM1	100	99.507	ENSNLEG00000008622	R3HDM1	100	98.818	Nomascus_leucogenys
ENSMNEG00000027793	R3HDM1	89	72.505	ENSMEUG00000011784	R3HDM1	100	72.709	Notamacropus_eugenii
ENSMNEG00000027793	R3HDM1	100	96.059	ENSODEG00000008607	R3HDM1	100	90.365	Octodon_degus
ENSMNEG00000027793	R3HDM1	94	66.873	ENSONIG00000012017	r3hdm1	93	66.763	Oreochromis_niloticus
ENSMNEG00000027793	R3HDM1	100	81.425	ENSOANG00000007987	R3HDM1	100	81.695	Ornithorhynchus_anatinus
ENSMNEG00000027793	R3HDM1	88	96.059	ENSOCUG00000017366	R3HDM1	98	93.394	Oryctolagus_cuniculus
ENSMNEG00000027793	R3HDM1	87	60.638	ENSORLG00000004297	r3hdm1	84	67.742	Oryzias_latipes
ENSMNEG00000027793	R3HDM1	89	61.067	ENSORLG00015017355	r3hdm1	85	68.065	Oryzias_latipes_hsok
ENSMNEG00000027793	R3HDM1	100	97.044	ENSOGAG00000003136	R3HDM1	100	93.200	Otolemur_garnettii
ENSMNEG00000027793	R3HDM1	100	95.813	ENSOARG00000010788	R3HDM1	100	93.654	Ovis_aries
ENSMNEG00000027793	R3HDM1	100	100.000	ENSPPAG00000027858	R3HDM1	100	98.730	Pan_paniscus
ENSMNEG00000027793	R3HDM1	100	97.291	ENSPPRG00000002626	R3HDM1	100	94.288	Panthera_pardus
ENSMNEG00000027793	R3HDM1	100	97.537	ENSPTIG00000016581	R3HDM1	100	94.288	Panthera_tigris_altaica
ENSMNEG00000027793	R3HDM1	100	100.000	ENSPTRG00000012494	R3HDM1	100	98.728	Pan_troglodytes
ENSMNEG00000027793	R3HDM1	100	99.754	ENSPANG00000026448	R3HDM1	100	99.727	Papio_anubis
ENSMNEG00000027793	R3HDM1	88	76.433	ENSPKIG00000004328	r3hdm1	91	76.677	Paramormyrops_kingsleyae
ENSMNEG00000027793	R3HDM1	100	78.571	ENSPSIG00000012915	R3HDM1	100	78.933	Pelodiscus_sinensis
ENSMNEG00000027793	R3HDM1	100	95.320	ENSPEMG00000015187	R3hdm1	100	91.030	Peromyscus_maniculatus_bairdii
ENSMNEG00000027793	R3HDM1	91	52.696	ENSPMAG00000003369	-	99	42.719	Petromyzon_marinus
ENSMNEG00000027793	R3HDM1	100	90.659	ENSPCIG00000002491	R3HDM1	100	83.874	Phascolarctos_cinereus
ENSMNEG00000027793	R3HDM1	88	59.620	ENSPFOG00000015036	r3hdm1	94	58.670	Poecilia_formosa
ENSMNEG00000027793	R3HDM1	87	59.947	ENSPLAG00000018042	r3hdm1	86	66.044	Poecilia_latipinna
ENSMNEG00000027793	R3HDM1	87	59.947	ENSPMEG00000023947	r3hdm1	86	66.044	Poecilia_mexicana
ENSMNEG00000027793	R3HDM1	81	68.608	ENSPREG00000007902	r3hdm1	88	68.608	Poecilia_reticulata
ENSMNEG00000027793	R3HDM1	100	97.636	ENSPPYG00000012815	R3HDM1	100	97.636	Pongo_abelii
ENSMNEG00000027793	R3HDM1	93	92.705	ENSPCAG00000006208	R3HDM1	94	92.121	Procavia_capensis
ENSMNEG00000027793	R3HDM1	100	93.801	ENSPCOG00000012698	R3HDM1	100	93.801	Propithecus_coquereli
ENSMNEG00000027793	R3HDM1	100	90.640	ENSPVAG00000006098	R3HDM1	100	85.766	Pteropus_vampyrus
ENSMNEG00000027793	R3HDM1	88	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSMNEG00000027793	R3HDM1	94	74.522	ENSPNAG00000013952	r3hdm1	95	58.020	Pygocentrus_nattereri
ENSMNEG00000027793	R3HDM1	67	38.575	ENSPNAG00000004162	arpp21	63	46.262	Pygocentrus_nattereri
ENSMNEG00000027793	R3HDM1	100	94.581	ENSRNOG00000004099	R3hdm1	100	86.532	Rattus_norvegicus
ENSMNEG00000027793	R3HDM1	100	98.369	ENSRBIG00000033317	R3HDM1	100	99.631	Rhinopithecus_bieti
ENSMNEG00000027793	R3HDM1	100	99.507	ENSRROG00000034534	R3HDM1	100	99.001	Rhinopithecus_roxellana
ENSMNEG00000027793	R3HDM1	100	98.522	ENSSBOG00000020389	R3HDM1	100	97.545	Saimiri_boliviensis_boliviensis
ENSMNEG00000027793	R3HDM1	100	83.982	ENSSHAG00000016999	R3HDM1	100	84.163	Sarcophilus_harrisii
ENSMNEG00000027793	R3HDM1	89	78.193	ENSSFOG00015014134	r3hdm1	100	70.631	Scleropages_formosus
ENSMNEG00000027793	R3HDM1	100	56.572	ENSSFOG00015019851	-	100	56.306	Scleropages_formosus
ENSMNEG00000027793	R3HDM1	99	60.541	ENSSMAG00000001669	r3hdm1	99	44.606	Scophthalmus_maximus
ENSMNEG00000027793	R3HDM1	87	62.766	ENSSDUG00000010749	r3hdm1	85	69.231	Seriola_dumerili
ENSMNEG00000027793	R3HDM1	92	69.231	ENSSLDG00000004499	r3hdm1	91	61.337	Seriola_lalandi_dorsalis
ENSMNEG00000027793	R3HDM1	75	82.724	ENSSARG00000000352	-	69	82.724	Sorex_araneus
ENSMNEG00000027793	R3HDM1	100	80.126	ENSSPUG00000004167	R3HDM1	100	80.217	Sphenodon_punctatus
ENSMNEG00000027793	R3HDM1	88	62.530	ENSSPAG00000004648	r3hdm1	91	63.467	Stegastes_partitus
ENSMNEG00000027793	R3HDM1	100	97.238	ENSSSCG00000015692	R3HDM1	100	94.832	Sus_scrofa
ENSMNEG00000027793	R3HDM1	100	73.713	ENSTGUG00000011750	R3HDM1	92	83.292	Taeniopygia_guttata
ENSMNEG00000027793	R3HDM1	81	67.532	ENSTRUG00000011654	r3hdm1	84	67.532	Takifugu_rubripes
ENSMNEG00000027793	R3HDM1	86	62.051	ENSTNIG00000010362	r3hdm1	99	45.572	Tetraodon_nigroviridis
ENSMNEG00000027793	R3HDM1	100	90.394	ENSTTRG00000003935	R3HDM1	100	87.851	Tursiops_truncatus
ENSMNEG00000027793	R3HDM1	70	96.263	ENSUAMG00000024806	R3HDM1	94	95.340	Ursus_americanus
ENSMNEG00000027793	R3HDM1	100	93.943	ENSUMAG00000005552	R3HDM1	100	94.045	Ursus_maritimus
ENSMNEG00000027793	R3HDM1	97	94.485	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSMNEG00000027793	R3HDM1	100	97.790	ENSVVUG00000006457	R3HDM1	100	91.806	Vulpes_vulpes
ENSMNEG00000027793	R3HDM1	90	67.573	ENSXETG00000019330	r3hdm1	100	67.372	Xenopus_tropicalis
ENSMNEG00000027793	R3HDM1	71	50.192	ENSXCOG00000017448	r3hdm1	94	50.453	Xiphophorus_couchianus
ENSMNEG00000027793	R3HDM1	88	61.337	ENSXMAG00000007885	r3hdm1	91	60.382	Xiphophorus_maculatus