EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000028921 (Gene tree)
Gene ID: 105495834
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 52773 bases
Position: chrKQ005747.1:2975126-3027898
Accession: 105495834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000008892	RRM_1	PF00076.22	8e-13	1	1
ENSMNEP00000008908	RRM_1	PF00076.22	8e-13	1	1
ENSMNEP00000008902	RRM_1	PF00076.22	1.2e-12	1	1
ENSMNEP00000008888	RRM_1	PF00076.22	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000033062	SLIRP-202	297	-	ENSMNEP00000008892	98 (aa)	-	A0A2K6BBT9
ENSMNET00000033078	SLIRP-204	279	-	ENSMNEP00000008908	93 (aa)	-	A0A2K6BBW3
ENSMNET00000033058	SLIRP-201	339	-	ENSMNEP00000008888	112 (aa)	-	A0A2K6BBU5
ENSMNET00000033072	SLIRP-203	2423	XM_011765684	ENSMNEP00000008902	109 (aa)	XP_011763986	A0A2K6BBV0

Gene Model

Click here to download ENSMNEG00000028921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000028921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000028921	SLIRP	70	32.308	ENSMNEG00000029148	HNRNPA2B1	62	32.308
ENSMNEG00000028921	SLIRP	79	31.461	ENSMNEG00000045275	MSI2	61	32.895
ENSMNEG00000028921	SLIRP	78	30.682	ENSMNEG00000034683	RBM38	70	31.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000028921	SLIRP	84	85.897	ENSG00000119705	SLIRP	100	86.957	Homo_sapiens
ENSMNEG00000028921	SLIRP	72	58.209	ENSAPOG00000001298	slirp	74	56.757	Acanthochromis_polyacanthus
ENSMNEG00000028921	SLIRP	96	79.775	ENSAMEG00000003975	SLIRP	88	78.750	Ailuropoda_melanoleuca
ENSMNEG00000028921	SLIRP	73	58.824	ENSACIG00000023083	slirp	73	58.108	Amphilophus_citrinellus
ENSMNEG00000028921	SLIRP	73	57.353	ENSAOCG00000006342	slirp	89	48.864	Amphiprion_ocellaris
ENSMNEG00000028921	SLIRP	73	57.353	ENSAPEG00000015917	slirp	89	48.864	Amphiprion_percula
ENSMNEG00000028921	SLIRP	73	57.353	ENSAPEG00000015719	-	90	48.864	Amphiprion_percula
ENSMNEG00000028921	SLIRP	72	59.701	ENSATEG00000013525	slirp	74	58.108	Anabas_testudineus
ENSMNEG00000028921	SLIRP	80	52.874	ENSAMXG00000018693	slirp	87	52.874	Astyanax_mexicanus
ENSMNEG00000028921	SLIRP	99	86.957	ENSCJAG00000016946	SLIRP	87	90.123	Callithrix_jacchus
ENSMNEG00000028921	SLIRP	95	77.273	ENSCAFG00020015876	-	90	72.000	Canis_lupus_dingo
ENSMNEG00000028921	SLIRP	100	79.817	ENSCCAG00000030130	SLIRP	90	81.633	Cebus_capucinus
ENSMNEG00000028921	SLIRP	100	97.959	ENSCATG00000036327	SLIRP	100	97.959	Cercocebus_atys
ENSMNEG00000028921	SLIRP	100	98.165	ENSCSAG00000011736	SLIRP	100	98.165	Chlorocebus_sabaeus
ENSMNEG00000028921	SLIRP	85	54.321	ENSCPBG00000026327	SLIRP	71	58.571	Chrysemys_picta_bellii
ENSMNEG00000028921	SLIRP	86	96.429	ENSCANG00000032892	SLIRP	94	93.478	Colobus_angolensis_palliatus
ENSMNEG00000028921	SLIRP	95	73.864	ENSCGRG00001024068	Slirp	83	69.565	Cricetulus_griseus_chok1gshd
ENSMNEG00000028921	SLIRP	95	73.864	ENSCGRG00000017440	Slirp	83	69.565	Cricetulus_griseus_crigri
ENSMNEG00000028921	SLIRP	92	47.674	ENSCSEG00000015766	slirp	72	54.930	Cynoglossus_semilaevis
ENSMNEG00000028921	SLIRP	72	65.672	ENSCVAG00000012504	slirp	68	65.217	Cyprinodon_variegatus
ENSMNEG00000028921	SLIRP	73	61.765	ENSDARG00000097753	slirp	72	60.811	Danio_rerio
ENSMNEG00000028921	SLIRP	82	66.667	ENSDNOG00000007721	SLIRP	100	63.636	Dasypus_novemcinctus
ENSMNEG00000028921	SLIRP	95	72.727	ENSDORG00000012379	Slirp	90	68.000	Dipodomys_ordii
ENSMNEG00000028921	SLIRP	90	67.347	ENSETEG00000010345	SLIRP	100	68.807	Echinops_telfairi
ENSMNEG00000028921	SLIRP	95	81.818	ENSEASG00005020193	SLIRP	90	76.000	Equus_asinus_asinus
ENSMNEG00000028921	SLIRP	87	62.963	ENSEEUG00000007257	SLIRP	90	59.341	Erinaceus_europaeus
ENSMNEG00000028921	SLIRP	70	60.000	ENSELUG00000016800	slirp	70	59.155	Esox_lucius
ENSMNEG00000028921	SLIRP	97	82.222	ENSFCAG00000036326	SLIRP	87	77.907	Felis_catus
ENSMNEG00000028921	SLIRP	72	56.716	ENSFALG00000012583	SLIRP	75	50.633	Ficedula_albicollis
ENSMNEG00000028921	SLIRP	96	64.894	ENSFDAG00000008347	SLIRP	86	60.825	Fukomys_damarensis
ENSMNEG00000028921	SLIRP	62	62.069	ENSFHEG00000004709	slirp	71	60.000	Fundulus_heteroclitus
ENSMNEG00000028921	SLIRP	79	54.545	ENSGMOG00000016948	slirp	83	49.425	Gadus_morhua
ENSMNEG00000028921	SLIRP	79	53.933	ENSGALG00000031238	SLIRP	78	57.692	Gallus_gallus
ENSMNEG00000028921	SLIRP	75	65.714	ENSGAFG00000010998	slirp	89	55.056	Gambusia_affinis
ENSMNEG00000028921	SLIRP	73	58.824	ENSGACG00000020137	slirp	98	52.381	Gasterosteus_aculeatus
ENSMNEG00000028921	SLIRP	91	56.044	ENSGAGG00000009953	SLIRP	52	63.158	Gopherus_agassizii
ENSMNEG00000028921	SLIRP	85	86.076	ENSGGOG00000011059	-	100	87.097	Gorilla_gorilla
ENSMNEG00000028921	SLIRP	100	61.261	ENSHGLG00000018491	SLIRP	90	61.000	Heterocephalus_glaber_female
ENSMNEG00000028921	SLIRP	100	61.261	ENSHGLG00100014153	SLIRP	90	61.000	Heterocephalus_glaber_male
ENSMNEG00000028921	SLIRP	79	59.740	ENSHCOG00000006795	slirp	89	56.818	Hippocampus_comes
ENSMNEG00000028921	SLIRP	80	51.724	ENSIPUG00000010214	SLIRP	87	51.724	Ictalurus_punctatus
ENSMNEG00000028921	SLIRP	90	70.000	ENSSTOG00000034316	SLIRP	90	70.000	Ictidomys_tridecemlineatus
ENSMNEG00000028921	SLIRP	79	50.649	ENSKMAG00000002038	slirp	73	50.649	Kryptolebias_marmoratus
ENSMNEG00000028921	SLIRP	72	59.701	ENSLBEG00000007564	slirp	88	50.000	Labrus_bergylta
ENSMNEG00000028921	SLIRP	82	54.444	ENSLACG00000013434	SLIRP	86	55.056	Latimeria_chalumnae
ENSMNEG00000028921	SLIRP	100	100.000	ENSMFAG00000042960	SLIRP	100	100.000	Macaca_fascicularis
ENSMNEG00000028921	SLIRP	100	98.980	ENSMMUG00000029256	SLIRP	100	98.980	Macaca_mulatta
ENSMNEG00000028921	SLIRP	100	97.959	ENSMLEG00000043644	SLIRP	100	97.959	Mandrillus_leucophaeus
ENSMNEG00000028921	SLIRP	72	61.194	ENSMZEG00005004617	slirp	89	51.136	Maylandia_zebra
ENSMNEG00000028921	SLIRP	100	68.468	ENSMAUG00000003857	Slirp	90	69.000	Mesocricetus_auratus
ENSMNEG00000028921	SLIRP	96	74.157	ENSMICG00000012080	SLIRP	91	71.698	Microcebus_murinus
ENSMNEG00000028921	SLIRP	95	75.000	ENSMOCG00000016019	Slirp	96	72.222	Microtus_ochrogaster
ENSMNEG00000028921	SLIRP	72	56.716	ENSMMOG00000018268	slirp	74	55.405	Mola_mola
ENSMNEG00000028921	SLIRP	74	59.420	ENSMODG00000005207	-	100	59.155	Monodelphis_domestica
ENSMNEG00000028921	SLIRP	92	49.000	ENSMALG00000012581	slirp	89	51.724	Monopterus_albus
ENSMNEG00000028921	SLIRP	95	77.273	MGP_CAROLIEiJ_G0017995	Slirp	90	73.196	Mus_caroli
ENSMNEG00000028921	SLIRP	95	78.409	ENSMUSG00000021040	Slirp	87	74.227	Mus_musculus
ENSMNEG00000028921	SLIRP	95	78.409	MGP_SPRETEiJ_G0018840	Slirp	87	74.227	Mus_spretus
ENSMNEG00000028921	SLIRP	90	68.000	ENSMLUG00000029544	-	100	68.468	Myotis_lucifugus
ENSMNEG00000028921	SLIRP	84	70.213	ENSMLUG00000024998	-	100	70.270	Myotis_lucifugus
ENSMNEG00000028921	SLIRP	95	69.318	ENSNGAG00000016363	Slirp	87	73.333	Nannospalax_galili
ENSMNEG00000028921	SLIRP	93	77.228	ENSNLEG00000027238	-	94	78.571	Nomascus_leucogenys
ENSMNEG00000028921	SLIRP	99	84.783	ENSNLEG00000032459	-	87	85.185	Nomascus_leucogenys
ENSMNEG00000028921	SLIRP	96	79.775	ENSODEG00000012580	SLIRP	87	80.000	Octodon_degus
ENSMNEG00000028921	SLIRP	72	61.194	ENSONIG00000011692	slirp	89	51.136	Oreochromis_niloticus
ENSMNEG00000028921	SLIRP	95	59.091	ENSOANG00000022366	SLIRP	69	67.532	Ornithorhynchus_anatinus
ENSMNEG00000028921	SLIRP	72	58.209	ENSORLG00000010761	slirp	57	56.757	Oryzias_latipes
ENSMNEG00000028921	SLIRP	72	59.701	ENSORLG00020022188	slirp	74	58.108	Oryzias_latipes_hni
ENSMNEG00000028921	SLIRP	95	50.000	ENSORLG00015020171	slirp	73	56.757	Oryzias_latipes_hsok
ENSMNEG00000028921	SLIRP	72	59.701	ENSOMEG00000019321	slirp	88	50.000	Oryzias_melastigma
ENSMNEG00000028921	SLIRP	85	86.076	ENSPPAG00000040710	-	100	87.097	Pan_paniscus
ENSMNEG00000028921	SLIRP	99	80.412	ENSPPRG00000014350	SLIRP	87	79.070	Panthera_pardus
ENSMNEG00000028921	SLIRP	99	80.412	ENSPTIG00000014196	SLIRP	87	79.070	Panthera_tigris_altaica
ENSMNEG00000028921	SLIRP	85	86.076	ENSPTRG00000030691	SLIRP	100	87.097	Pan_troglodytes
ENSMNEG00000028921	SLIRP	100	96.939	ENSPANG00000026323	SLIRP	100	96.939	Papio_anubis
ENSMNEG00000028921	SLIRP	62	58.621	ENSPKIG00000008831	slirp	66	55.224	Paramormyrops_kingsleyae
ENSMNEG00000028921	SLIRP	72	67.164	ENSPMGG00000010541	slirp	79	66.667	Periophthalmus_magnuspinnatus
ENSMNEG00000028921	SLIRP	83	72.727	ENSPEMG00000013234	Slirp	96	68.807	Peromyscus_maniculatus_bairdii
ENSMNEG00000028921	SLIRP	65	53.333	ENSPMAG00000009355	slirp	76	48.529	Petromyzon_marinus
ENSMNEG00000028921	SLIRP	85	56.790	ENSPCIG00000026842	-	74	62.319	Phascolarctos_cinereus
ENSMNEG00000028921	SLIRP	72	64.179	ENSPFOG00000006758	slirp	88	53.409	Poecilia_formosa
ENSMNEG00000028921	SLIRP	72	64.179	ENSPLAG00000011140	slirp	88	53.409	Poecilia_latipinna
ENSMNEG00000028921	SLIRP	72	64.179	ENSPMEG00000019535	slirp	88	53.409	Poecilia_mexicana
ENSMNEG00000028921	SLIRP	73	63.235	ENSPREG00000011673	slirp	76	60.256	Poecilia_reticulata
ENSMNEG00000028921	SLIRP	95	81.818	ENSPPYG00000006030	SLIRP	100	78.899	Pongo_abelii
ENSMNEG00000028921	SLIRP	96	76.404	ENSPCOG00000015159	SLIRP	91	69.524	Propithecus_coquereli
ENSMNEG00000028921	SLIRP	73	66.176	ENSPNAG00000008633	slirp	88	56.322	Pygocentrus_nattereri
ENSMNEG00000028921	SLIRP	100	96.939	ENSRBIG00000032222	-	100	96.939	Rhinopithecus_bieti
ENSMNEG00000028921	SLIRP	88	89.655	ENSRBIG00000032998	-	80	89.655	Rhinopithecus_bieti
ENSMNEG00000028921	SLIRP	97	87.736	ENSRBIG00000035817	-	89	87.368	Rhinopithecus_bieti
ENSMNEG00000028921	SLIRP	92	95.349	ENSRBIG00000031396	-	75	96.000	Rhinopithecus_bieti
ENSMNEG00000028921	SLIRP	84	93.590	ENSRROG00000041312	-	84	90.909	Rhinopithecus_roxellana
ENSMNEG00000028921	SLIRP	100	95.918	ENSRROG00000036656	-	90	96.040	Rhinopithecus_roxellana
ENSMNEG00000028921	SLIRP	92	94.186	ENSRROG00000035604	-	75	94.667	Rhinopithecus_roxellana
ENSMNEG00000028921	SLIRP	100	91.667	ENSRROG00000017133	-	89	91.765	Rhinopithecus_roxellana
ENSMNEG00000028921	SLIRP	99	82.609	ENSSBOG00000020014	SLIRP	87	85.185	Saimiri_boliviensis_boliviensis
ENSMNEG00000028921	SLIRP	72	59.701	ENSSFOG00015011165	slirp	78	55.844	Scleropages_formosus
ENSMNEG00000028921	SLIRP	99	41.071	ENSSMAG00000012930	slirp	85	42.529	Scophthalmus_maximus
ENSMNEG00000028921	SLIRP	72	62.687	ENSSLDG00000023136	slirp	67	60.811	Seriola_lalandi_dorsalis
ENSMNEG00000028921	SLIRP	86	58.025	ENSSPUG00000009346	SLIRP	76	62.162	Sphenodon_punctatus
ENSMNEG00000028921	SLIRP	72	55.224	ENSSPAG00000013477	slirp	88	45.455	Stegastes_partitus
ENSMNEG00000028921	SLIRP	100	72.072	ENSSSCG00000028167	SLIRP	90	72.000	Sus_scrofa
ENSMNEG00000028921	SLIRP	72	58.209	ENSTGUG00000012337	SLIRP	78	51.807	Taeniopygia_guttata
ENSMNEG00000028921	SLIRP	95	46.067	ENSTRUG00000020127	slirp	74	53.333	Takifugu_rubripes
ENSMNEG00000028921	SLIRP	95	79.545	ENSUAMG00000022445	SLIRP	90	73.000	Ursus_americanus
ENSMNEG00000028921	SLIRP	100	74.775	ENSUMAG00000007166	SLIRP	90	74.000	Ursus_maritimus
ENSMNEG00000028921	SLIRP	100	73.394	ENSVPAG00000001781	SLIRP	90	72.449	Vicugna_pacos
ENSMNEG00000028921	SLIRP	83	79.221	ENSVVUG00000004436	SLIRP	100	72.973	Vulpes_vulpes
ENSMNEG00000028921	SLIRP	72	62.687	ENSXETG00000030343	SLIRP	79	62.857	Xenopus_tropicalis
ENSMNEG00000028921	SLIRP	74	63.768	ENSXCOG00000009422	slirp	88	53.409	Xiphophorus_couchianus
ENSMNEG00000028921	SLIRP	74	65.217	ENSXMAG00000015655	slirp	88	54.545	Xiphophorus_maculatus