EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000029837 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: replication protein A 70 kDa DNA-binding subunit pseudogene
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 1854 bases
Position: chrKQ005592.1:467592-469445
Accession: 105493760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000010901	tRNA_anti-codon	PF01336.25	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000035082	-	1644	-	ENSMNEP00000010901	547 (aa)	-	A0A2K6BHN0

Gene Model

Click here to download ENSMNEG00000029837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000029837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000029837	-	100	92.812	ENSMNEG00000031632	-	100	77.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000029837	-	97	65.066	ENSAPOG00000011658	rpa1	99	57.219	Acanthochromis_polyacanthus
ENSMNEG00000029837	-	94	58.770	ENSAPOG00000019409	RPA1	74	58.770	Acanthochromis_polyacanthus
ENSMNEG00000029837	-	98	84.746	ENSAMEG00000007706	RPA1	87	84.746	Ailuropoda_melanoleuca
ENSMNEG00000029837	-	95	49.396	ENSACIG00000007277	rpa1	99	49.396	Amphilophus_citrinellus
ENSMNEG00000029837	-	82	59.465	ENSACIG00000012881	RPA1	76	59.465	Amphilophus_citrinellus
ENSMNEG00000029837	-	95	58.784	ENSAOCG00000009003	RPA1	79	58.784	Amphiprion_ocellaris
ENSMNEG00000029837	-	97	66.302	ENSAOCG00000023376	rpa1	87	66.302	Amphiprion_ocellaris
ENSMNEG00000029837	-	99	59.459	ENSAPEG00000019132	RPA1	85	59.459	Amphiprion_percula
ENSMNEG00000029837	-	97	65.864	ENSAPEG00000008634	rpa1	87	65.864	Amphiprion_percula
ENSMNEG00000029837	-	93	61.239	ENSATEG00000006443	RPA1	78	61.239	Anabas_testudineus
ENSMNEG00000029837	-	92	65.510	ENSATEG00000022024	rpa1	88	65.510	Anabas_testudineus
ENSMNEG00000029837	-	97	62.903	ENSAPLG00000012442	RPA1	89	62.903	Anas_platyrhynchos
ENSMNEG00000029837	-	99	54.908	ENSACAG00000014490	RPA1	99	56.073	Anolis_carolinensis
ENSMNEG00000029837	-	98	90.063	ENSANAG00000023456	RPA1	100	83.275	Aotus_nancymaae
ENSMNEG00000029837	-	84	66.376	ENSACLG00000006640	rpa1	81	66.376	Astatotilapia_calliptera
ENSMNEG00000029837	-	99	60.000	ENSACLG00000005223	RPA1	89	60.000	Astatotilapia_calliptera
ENSMNEG00000029837	-	99	61.373	ENSAMXG00000008418	rpa1	99	56.498	Astyanax_mexicanus
ENSMNEG00000029837	-	100	88.000	ENSBTAG00000009711	RPA1	89	88.000	Bos_taurus
ENSMNEG00000029837	-	100	89.852	ENSCJAG00000001848	RPA1	89	89.852	Callithrix_jacchus
ENSMNEG00000029837	-	100	88.000	ENSCAFG00000019249	RPA1	89	88.000	Canis_familiaris
ENSMNEG00000029837	-	100	88.000	ENSCAFG00020009847	RPA1	89	88.000	Canis_lupus_dingo
ENSMNEG00000029837	-	100	89.333	ENSCHIG00000026308	RPA1	89	89.333	Capra_hircus
ENSMNEG00000029837	-	100	89.333	ENSTSYG00000003482	-	88	89.333	Carlito_syrichta
ENSMNEG00000029837	-	100	84.778	ENSCPOG00000000035	RPA1	89	84.778	Cavia_porcellus
ENSMNEG00000029837	-	100	84.000	ENSCCAG00000010981	RPA1	87	91.089	Cebus_capucinus
ENSMNEG00000029837	-	99	85.350	ENSCLAG00000005185	-	88	85.350	Chinchilla_lanigera
ENSMNEG00000029837	-	100	81.333	ENSCLAG00000015045	-	91	81.333	Chinchilla_lanigera
ENSMNEG00000029837	-	100	88.000	ENSCSAG00000013833	RPA1	100	67.528	Chlorocebus_sabaeus
ENSMNEG00000029837	-	80	86.168	ENSCHOG00000009454	-	100	86.168	Choloepus_hoffmanni
ENSMNEG00000029837	-	95	84.989	ENSCHOG00000013540	-	88	84.989	Choloepus_hoffmanni
ENSMNEG00000029837	-	99	63.740	ENSCPBG00000020377	RPA1	99	63.740	Chrysemys_picta_bellii
ENSMNEG00000029837	-	90	42.656	ENSCING00000023482	-	81	42.656	Ciona_intestinalis
ENSMNEG00000029837	-	98	84.522	ENSCANG00000030911	RPA1	99	84.522	Colobus_angolensis_palliatus
ENSMNEG00000029837	-	99	85.333	ENSCGRG00001008197	Rpa1	89	85.333	Cricetulus_griseus_chok1gshd
ENSMNEG00000029837	-	88	83.195	ENSCGRG00000000582	Rpa1	93	83.195	Cricetulus_griseus_crigri
ENSMNEG00000029837	-	97	60.917	ENSCSEG00000013066	rpa1	86	60.917	Cynoglossus_semilaevis
ENSMNEG00000029837	-	81	56.726	ENSCSEG00000012726	RPA1	75	56.726	Cynoglossus_semilaevis
ENSMNEG00000029837	-	95	61.314	ENSCVAG00000013446	-	89	61.314	Cyprinodon_variegatus
ENSMNEG00000029837	-	96	65.342	ENSCVAG00000019431	rpa1	86	65.342	Cyprinodon_variegatus
ENSMNEG00000029837	-	99	53.377	ENSDARG00000003938	rpa1	99	53.377	Danio_rerio
ENSMNEG00000029837	-	98	86.567	ENSDNOG00000017218	RPA1	87	86.567	Dasypus_novemcinctus
ENSMNEG00000029837	-	95	85.106	ENSDORG00000006199	Rpa1	99	74.838	Dipodomys_ordii
ENSMNEG00000029837	-	99	38.230	FBgn0010173	RpA-70	98	38.731	Drosophila_melanogaster
ENSMNEG00000029837	-	80	84.015	ENSETEG00000017608	RPA1	71	84.015	Echinops_telfairi
ENSMNEG00000029837	-	98	88.710	ENSEASG00005009372	RPA1	100	83.270	Equus_asinus_asinus
ENSMNEG00000029837	-	100	88.000	ENSECAG00000023886	RPA1	89	88.000	Equus_caballus
ENSMNEG00000029837	-	77	83.886	ENSEEUG00000002186	-	68	83.886	Erinaceus_europaeus
ENSMNEG00000029837	-	77	61.137	ENSELUG00000006136	RPA1	83	61.137	Esox_lucius
ENSMNEG00000029837	-	99	62.047	ENSELUG00000021071	rpa1	89	62.260	Esox_lucius
ENSMNEG00000029837	-	100	86.667	ENSFCAG00000006306	RPA1	91	86.667	Felis_catus
ENSMNEG00000029837	-	99	71.186	ENSFALG00000006575	RPA1	88	71.186	Ficedula_albicollis
ENSMNEG00000029837	-	99	85.987	ENSFDAG00000007720	RPA1	88	85.987	Fukomys_damarensis
ENSMNEG00000029837	-	95	64.222	ENSFHEG00000003580	rpa1	85	64.222	Fundulus_heteroclitus
ENSMNEG00000029837	-	99	56.153	ENSGMOG00000010382	rpa1	99	56.153	Gadus_morhua
ENSMNEG00000029837	-	99	72.246	ENSGALG00000003072	RPA1	88	72.246	Gallus_gallus
ENSMNEG00000029837	-	99	55.090	ENSGAFG00000020953	RPA1	86	55.090	Gambusia_affinis
ENSMNEG00000029837	-	98	54.515	ENSGAFG00000012916	rpa1	99	54.515	Gambusia_affinis
ENSMNEG00000029837	-	97	63.100	ENSGACG00000010856	rpa1	99	54.377	Gasterosteus_aculeatus
ENSMNEG00000029837	-	99	63.740	ENSGAGG00000013611	RPA1	99	63.740	Gopherus_agassizii
ENSMNEG00000029837	-	100	85.009	ENSGGOG00000014186	RPA1	100	85.009	Gorilla_gorilla
ENSMNEG00000029837	-	99	55.058	ENSHBUG00000017773	rpa1	99	55.058	Haplochromis_burtoni
ENSMNEG00000029837	-	96	48.264	ENSHBUG00000009348	RPA1	99	48.264	Haplochromis_burtoni
ENSMNEG00000029837	-	99	85.775	ENSHGLG00000008846	RPA1	91	83.811	Heterocephalus_glaber_female
ENSMNEG00000029837	-	100	66.172	ENSHGLG00100002005	-	100	67.162	Heterocephalus_glaber_male
ENSMNEG00000029837	-	100	72.893	ENSHGLG00100000799	-	100	72.893	Heterocephalus_glaber_male
ENSMNEG00000029837	-	99	85.775	ENSHGLG00100017755	-	91	83.811	Heterocephalus_glaber_male
ENSMNEG00000029837	-	99	61.635	ENSHCOG00000001401	rpa1	88	61.635	Hippocampus_comes
ENSMNEG00000029837	-	99	43.229	ENSHCOG00000000351	RPA1	99	43.229	Hippocampus_comes
ENSMNEG00000029837	-	97	62.664	ENSIPUG00000004400	rpa1	87	62.882	Ictalurus_punctatus
ENSMNEG00000029837	-	97	81.915	ENSSTOG00000022475	RPA1	85	81.915	Ictidomys_tridecemlineatus
ENSMNEG00000029837	-	95	85.106	ENSJJAG00000000876	Rpa1	86	85.106	Jaculus_jaculus
ENSMNEG00000029837	-	98	62.851	ENSKMAG00000005605	rpa1	87	62.851	Kryptolebias_marmoratus
ENSMNEG00000029837	-	99	48.282	ENSKMAG00000000234	RPA1	99	48.282	Kryptolebias_marmoratus
ENSMNEG00000029837	-	99	59.142	ENSLBEG00000002281	RPA1	81	59.142	Labrus_bergylta
ENSMNEG00000029837	-	98	62.741	ENSLBEG00000021604	rpa1	99	55.651	Labrus_bergylta
ENSMNEG00000029837	-	89	63.599	ENSLACG00000007210	RPA1	98	63.599	Latimeria_chalumnae
ENSMNEG00000029837	-	99	56.908	ENSLOCG00000006397	rpa1	99	56.908	Lepisosteus_oculatus
ENSMNEG00000029837	-	99	86.667	ENSLAFG00000015354	RPA1	87	84.926	Loxodonta_africana
ENSMNEG00000029837	-	79	92.204	ENSMFAG00000036138	-	99	76.832	Macaca_fascicularis
ENSMNEG00000029837	-	98	93.023	ENSMMUG00000011604	-	99	80.033	Macaca_mulatta
ENSMNEG00000029837	-	100	88.500	ENSMMUG00000002442	-	100	88.500	Macaca_mulatta
ENSMNEG00000029837	-	98	90.323	ENSMLEG00000038768	-	88	90.323	Mandrillus_leucophaeus
ENSMNEG00000029837	-	93	58.986	ENSMAMG00000020097	RPA1	77	58.000	Mastacembelus_armatus
ENSMNEG00000029837	-	96	65.570	ENSMAMG00000017993	rpa1	99	58.759	Mastacembelus_armatus
ENSMNEG00000029837	-	99	60.000	ENSMZEG00005024731	RPA1	89	60.000	Maylandia_zebra
ENSMNEG00000029837	-	99	55.058	ENSMZEG00005007551	rpa1	99	55.058	Maylandia_zebra
ENSMNEG00000029837	-	98	71.822	ENSMGAG00000005315	RPA1	87	71.822	Meleagris_gallopavo
ENSMNEG00000029837	-	97	88.525	ENSMAUG00000010474	Rpa1	99	73.920	Mesocricetus_auratus
ENSMNEG00000029837	-	100	92.000	ENSMICG00000012867	RPA1	100	75.728	Microcebus_murinus
ENSMNEG00000029837	-	99	84.000	ENSMOCG00000013019	Rpa1	88	84.000	Microtus_ochrogaster
ENSMNEG00000029837	-	97	53.028	ENSMMOG00000010868	RPA1	97	53.028	Mola_mola
ENSMNEG00000029837	-	97	63.537	ENSMMOG00000014292	rpa1	87	63.537	Mola_mola
ENSMNEG00000029837	-	99	78.667	ENSMODG00000010549	RPA1	90	78.667	Monodelphis_domestica
ENSMNEG00000029837	-	96	65.570	ENSMALG00000011453	rpa1	87	65.789	Monopterus_albus
ENSMNEG00000029837	-	95	58.559	ENSMALG00000001208	RPA1	72	58.559	Monopterus_albus
ENSMNEG00000029837	-	99	82.667	MGP_CAROLIEiJ_G0016734	Rpa1	88	82.667	Mus_caroli
ENSMNEG00000029837	-	99	82.979	ENSMUSG00000000751	Rpa1	87	82.979	Mus_musculus
ENSMNEG00000029837	-	99	85.333	MGP_PahariEiJ_G0017871	Rpa1	88	85.333	Mus_pahari
ENSMNEG00000029837	-	99	83.191	MGP_SPRETEiJ_G0017577	Rpa1	87	83.191	Mus_spretus
ENSMNEG00000029837	-	100	86.667	ENSMPUG00000013119	RPA1	89	86.667	Mustela_putorius_furo
ENSMNEG00000029837	-	100	83.510	ENSMLUG00000006113	RPA1	89	83.510	Myotis_lucifugus
ENSMNEG00000029837	-	95	83.510	ENSNGAG00000004522	Rpa1	83	83.510	Nannospalax_galili
ENSMNEG00000029837	-	93	57.726	ENSNBRG00000020595	rpa1	99	57.726	Neolamprologus_brichardi
ENSMNEG00000029837	-	96	48.797	ENSNBRG00000009672	RPA1	95	48.797	Neolamprologus_brichardi
ENSMNEG00000029837	-	100	91.332	ENSNLEG00000017149	RPA1	89	91.332	Nomascus_leucogenys
ENSMNEG00000029837	-	98	73.016	ENSMEUG00000006714	RPA1	88	73.016	Notamacropus_eugenii
ENSMNEG00000029837	-	95	81.460	ENSODEG00000009038	RPA1	88	81.460	Octodon_degus
ENSMNEG00000029837	-	99	64.948	ENSONIG00000013135	rpa1	89	64.948	Oreochromis_niloticus
ENSMNEG00000029837	-	97	78.647	ENSOANG00000010880	RPA1	88	79.070	Ornithorhynchus_anatinus
ENSMNEG00000029837	-	100	85.835	ENSOCUG00000001504	RPA1	85	85.835	Oryctolagus_cuniculus
ENSMNEG00000029837	-	96	65.055	ENSORLG00000004856	rpa1	87	65.055	Oryzias_latipes
ENSMNEG00000029837	-	93	59.545	ENSORLG00000003368	RPA1	77	59.545	Oryzias_latipes
ENSMNEG00000029837	-	96	65.275	ENSORLG00020008980	rpa1	87	65.275	Oryzias_latipes_hni
ENSMNEG00000029837	-	95	58.482	ENSORLG00020015284	RPA1	77	58.482	Oryzias_latipes_hni
ENSMNEG00000029837	-	95	58.259	ENSORLG00015020383	RPA1	80	58.259	Oryzias_latipes_hsok
ENSMNEG00000029837	-	96	65.275	ENSORLG00015013982	rpa1	87	65.275	Oryzias_latipes_hsok
ENSMNEG00000029837	-	76	57.933	ENSORLG00015005867	-	94	57.933	Oryzias_latipes_hsok
ENSMNEG00000029837	-	88	59.804	ENSOMEG00000011040	RPA1	99	51.681	Oryzias_melastigma
ENSMNEG00000029837	-	97	62.144	ENSOMEG00000004704	rpa1	99	52.128	Oryzias_melastigma
ENSMNEG00000029837	-	93	89.333	ENSOGAG00000029379	-	85	89.333	Otolemur_garnettii
ENSMNEG00000029837	-	100	89.333	ENSOGAG00000005581	-	89	89.333	Otolemur_garnettii
ENSMNEG00000029837	-	100	89.333	ENSOARG00000014479	RPA1	89	89.333	Ovis_aries
ENSMNEG00000029837	-	100	91.332	ENSPPAG00000039680	RPA1	89	91.332	Pan_paniscus
ENSMNEG00000029837	-	100	85.333	ENSPPRG00000011807	RPA1	91	85.333	Panthera_pardus
ENSMNEG00000029837	-	100	86.667	ENSPTIG00000007898	RPA1	91	86.667	Panthera_tigris_altaica
ENSMNEG00000029837	-	100	91.755	ENSPTRG00000008539	RPA1	89	91.755	Pan_troglodytes
ENSMNEG00000029837	-	100	93.023	ENSPANG00000024592	RPA1	100	80.259	Papio_anubis
ENSMNEG00000029837	-	93	63.158	ENSPKIG00000008053	rpa1	83	63.158	Paramormyrops_kingsleyae
ENSMNEG00000029837	-	97	63.333	ENSPSIG00000015617	RPA1	99	63.333	Pelodiscus_sinensis
ENSMNEG00000029837	-	99	55.518	ENSPMGG00000011589	rpa1	99	55.688	Periophthalmus_magnuspinnatus
ENSMNEG00000029837	-	99	48.814	ENSPMGG00000000543	RPA1	99	48.814	Periophthalmus_magnuspinnatus
ENSMNEG00000029837	-	97	85.714	ENSPEMG00000021061	Rpa1	99	73.496	Peromyscus_maniculatus_bairdii
ENSMNEG00000029837	-	100	79.493	ENSPCIG00000019049	RPA1	88	79.493	Phascolarctos_cinereus
ENSMNEG00000029837	-	96	65.188	ENSPFOG00000003987	rpa1	99	54.620	Poecilia_formosa
ENSMNEG00000029837	-	94	56.733	ENSPLAG00000008844	-	81	56.733	Poecilia_latipinna
ENSMNEG00000029837	-	96	65.188	ENSPLAG00000004984	rpa1	87	65.188	Poecilia_latipinna
ENSMNEG00000029837	-	96	65.188	ENSPMEG00000020602	rpa1	87	65.188	Poecilia_mexicana
ENSMNEG00000029837	-	89	60.584	ENSPMEG00000003627	-	75	60.584	Poecilia_mexicana
ENSMNEG00000029837	-	99	56.701	ENSPREG00000010119	RPA1	82	56.701	Poecilia_reticulata
ENSMNEG00000029837	-	91	58.907	ENSPREG00000010174	rpa1	82	58.907	Poecilia_reticulata
ENSMNEG00000029837	-	100	75.728	ENSPCOG00000001799	RPA1	100	75.728	Propithecus_coquereli
ENSMNEG00000029837	-	99	86.667	ENSPVAG00000002149	RPA1	88	86.667	Pteropus_vampyrus
ENSMNEG00000029837	-	99	55.224	ENSPNYG00000016316	rpa1	99	55.224	Pundamilia_nyererei
ENSMNEG00000029837	-	99	59.778	ENSPNYG00000024165	RPA1	89	59.778	Pundamilia_nyererei
ENSMNEG00000029837	-	95	54.684	ENSPNAG00000008599	rpa1	96	48.606	Pygocentrus_nattereri
ENSMNEG00000029837	-	99	84.000	ENSRNOG00000003123	Rpa1	88	84.000	Rattus_norvegicus
ENSMNEG00000029837	-	100	79.612	ENSRBIG00000036587	RPA1	100	79.612	Rhinopithecus_bieti
ENSMNEG00000029837	-	100	74.272	ENSRROG00000043278	RPA1	100	74.272	Rhinopithecus_roxellana
ENSMNEG00000029837	-	76	36.744	YAR007C	RFA1	68	36.744	Saccharomyces_cerevisiae
ENSMNEG00000029837	-	98	91.121	ENSSBOG00000030233	RPA1	88	91.121	Saimiri_boliviensis_boliviensis
ENSMNEG00000029837	-	99	79.710	ENSSHAG00000007969	RPA1	88	79.710	Sarcophilus_harrisii
ENSMNEG00000029837	-	98	65.443	ENSSFOG00015005362	rpa1	82	65.443	Scleropages_formosus
ENSMNEG00000029837	-	81	59.685	ENSSMAG00000019746	RPA1	78	59.685	Scophthalmus_maximus
ENSMNEG00000029837	-	99	61.009	ENSSDUG00000016358	RPA1	92	60.586	Seriola_dumerili
ENSMNEG00000029837	-	97	65.939	ENSSDUG00000011949	rpa1	96	58.855	Seriola_dumerili
ENSMNEG00000029837	-	99	60.550	ENSSLDG00000020784	RPA1	92	60.135	Seriola_lalandi_dorsalis
ENSMNEG00000029837	-	97	66.376	ENSSLDG00000011806	rpa1	96	59.213	Seriola_lalandi_dorsalis
ENSMNEG00000029837	-	86	76.471	ENSSARG00000007506	RPA1	89	76.471	Sorex_araneus
ENSMNEG00000029837	-	96	70.576	ENSSPUG00000007223	RPA1	87	70.576	Sphenodon_punctatus
ENSMNEG00000029837	-	96	52.241	ENSSPAG00000011165	RPA1	97	51.646	Stegastes_partitus
ENSMNEG00000029837	-	96	65.132	ENSSPAG00000009903	rpa1	87	65.132	Stegastes_partitus
ENSMNEG00000029837	-	98	87.097	ENSSSCG00000017822	RPA1	100	79.216	Sus_scrofa
ENSMNEG00000029837	-	99	71.702	ENSTGUG00000005775	RPA1	88	71.702	Taeniopygia_guttata
ENSMNEG00000029837	-	96	65.934	ENSTRUG00000003616	rpa1	87	65.934	Takifugu_rubripes
ENSMNEG00000029837	-	91	59.070	ENSTRUG00000000405	RPA1	71	58.636	Takifugu_rubripes
ENSMNEG00000029837	-	99	64.968	ENSTNIG00000016199	rpa1	90	64.256	Tetraodon_nigroviridis
ENSMNEG00000029837	-	88	88.095	ENSTBEG00000002709	RPA1	81	88.095	Tupaia_belangeri
ENSMNEG00000029837	-	99	84.958	ENSTTRG00000001169	RPA1	88	84.958	Tursiops_truncatus
ENSMNEG00000029837	-	88	88.889	ENSUAMG00000015676	RPA1	97	88.462	Ursus_americanus
ENSMNEG00000029837	-	100	88.000	ENSUMAG00000009328	RPA1	100	79.046	Ursus_maritimus
ENSMNEG00000029837	-	100	83.087	ENSVPAG00000009443	RPA1	89	83.087	Vicugna_pacos
ENSMNEG00000029837	-	100	89.333	ENSVVUG00000021715	RPA1	89	89.333	Vulpes_vulpes
ENSMNEG00000029837	-	97	72.489	ENSXETG00000013538	rpa1	86	72.707	Xenopus_tropicalis
ENSMNEG00000029837	-	93	53.285	ENSXCOG00000009899	-	98	53.285	Xiphophorus_couchianus
ENSMNEG00000029837	-	90	54.029	ENSXCOG00000010068	rpa1	94	53.959	Xiphophorus_couchianus
ENSMNEG00000029837	-	96	62.971	ENSXMAG00000004102	rpa1	87	62.971	Xiphophorus_maculatus
ENSMNEG00000029837	-	95	59.819	ENSXMAG00000010333	RPA1	73	59.819	Xiphophorus_maculatus