EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000030405 (Gene tree)
Gene ID: 105469230
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 131315 bases
Position: chrKQ007744.1:14799315-14930629
Accession: 105469230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000012214	Ago_hook	PF10427.9	2.3e-21	1	1
ENSMNEP00000012225	Ago_hook	PF10427.9	2.4e-21	1	1
ENSMNEP00000012241	Ago_hook	PF10427.9	3.5e-21	1	1
ENSMNEP00000012198	Ago_hook	PF10427.9	3.5e-21	1	1
ENSMNEP00000012198	RRM_1	PF00076.22	0.00035	1	1
ENSMNEP00000012225	RRM_1	PF00076.22	0.0004	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000036409	TNRC6C-202	10958	XM_011720021	ENSMNEP00000012214	1943 (aa)	XP_011718323	A0A2K6BL82
ENSMNET00000036436	TNRC6C-204	5760	-	ENSMNEP00000012241	1919 (aa)	-	A0A2K6BLE8
ENSMNET00000036420	TNRC6C-203	5631	-	ENSMNEP00000012225	1876 (aa)	-	A0A2K6BLF8
ENSMNET00000036393	TNRC6C-201	10828	XM_011720030	ENSMNEP00000012198	1689 (aa)	XP_011718332	A0A2K6BLF0

Gene Model

Click here to download ENSMNEG00000030405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000030405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000030405	TNRC6C	99	35.379	ENSMNEG00000042745	TNRC6B	99	39.406
ENSMNEG00000030405	TNRC6C	99	42.927	ENSMNEG00000034854	TNRC6A	99	42.289

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000030405	TNRC6C	100	98.971	ENSG00000078687	TNRC6C	100	98.971	Homo_sapiens
ENSMNEG00000030405	TNRC6C	80	54.545	ENSAPOG00000019749	tnrc6c1	98	49.104	Acanthochromis_polyacanthus
ENSMNEG00000030405	TNRC6C	100	87.586	ENSAMEG00000013756	TNRC6C	99	89.120	Ailuropoda_melanoleuca
ENSMNEG00000030405	TNRC6C	94	48.893	ENSACIG00000008075	tnrc6c1	98	54.372	Amphilophus_citrinellus
ENSMNEG00000030405	TNRC6C	77	68.960	ENSAOCG00000023968	tnrc6c1	99	49.053	Amphiprion_ocellaris
ENSMNEG00000030405	TNRC6C	80	54.264	ENSAPEG00000009020	tnrc6c1	99	48.950	Amphiprion_percula
ENSMNEG00000030405	TNRC6C	99	86.563	ENSAPLG00000005456	TNRC6C	100	86.474	Anas_platyrhynchos
ENSMNEG00000030405	TNRC6C	99	86.979	ENSACAG00000016198	TNRC6C	98	86.771	Anolis_carolinensis
ENSMNEG00000030405	TNRC6C	100	98.147	ENSANAG00000021554	TNRC6C	100	98.203	Aotus_nancymaae
ENSMNEG00000030405	TNRC6C	100	48.222	ENSACLG00000000424	tnrc6c1	99	48.660	Astatotilapia_calliptera
ENSMNEG00000030405	TNRC6C	100	87.950	ENSBTAG00000018658	TNRC6C	100	88.246	Bos_taurus
ENSMNEG00000030405	TNRC6C	100	98.046	ENSCJAG00000019431	TNRC6C	100	98.046	Callithrix_jacchus
ENSMNEG00000030405	TNRC6C	99	90.999	ENSCAFG00000005224	TNRC6C	99	90.999	Canis_familiaris
ENSMNEG00000030405	TNRC6C	100	91.112	ENSCAFG00020006661	TNRC6C	100	90.420	Canis_lupus_dingo
ENSMNEG00000030405	TNRC6C	100	87.692	ENSCHIG00000026004	TNRC6C	100	86.235	Capra_hircus
ENSMNEG00000030405	TNRC6C	100	93.519	ENSTSYG00000005403	TNRC6C	100	95.557	Carlito_syrichta
ENSMNEG00000030405	TNRC6C	100	84.824	ENSCAPG00000007307	TNRC6C	99	83.918	Cavia_aperea
ENSMNEG00000030405	TNRC6C	100	90.172	ENSCPOG00000000467	TNRC6C	100	88.222	Cavia_porcellus
ENSMNEG00000030405	TNRC6C	100	98.283	ENSCCAG00000030524	TNRC6C	100	98.283	Cebus_capucinus
ENSMNEG00000030405	TNRC6C	100	99.822	ENSCATG00000033135	TNRC6C	100	99.822	Cercocebus_atys
ENSMNEG00000030405	TNRC6C	100	93.250	ENSCLAG00000011139	TNRC6C	99	90.521	Chinchilla_lanigera
ENSMNEG00000030405	TNRC6C	100	99.331	ENSCSAG00000005167	TNRC6C	100	99.331	Chlorocebus_sabaeus
ENSMNEG00000030405	TNRC6C	75	92.051	ENSCHOG00000000088	TNRC6C	72	91.172	Choloepus_hoffmanni
ENSMNEG00000030405	TNRC6C	100	88.009	ENSCPBG00000027960	TNRC6C	100	88.009	Chrysemys_picta_bellii
ENSMNEG00000030405	TNRC6C	100	99.177	ENSCANG00000041771	TNRC6C	100	99.177	Colobus_angolensis_palliatus
ENSMNEG00000030405	TNRC6C	100	89.806	ENSCGRG00001022686	Tnrc6c	100	88.627	Cricetulus_griseus_chok1gshd
ENSMNEG00000030405	TNRC6C	100	90.231	ENSCGRG00000018041	Tnrc6c	100	88.627	Cricetulus_griseus_crigri
ENSMNEG00000030405	TNRC6C	80	53.408	ENSCSEG00000012744	tnrc6c1	98	46.031	Cynoglossus_semilaevis
ENSMNEG00000030405	TNRC6C	100	53.492	ENSDARG00000076847	tnrc6c1	99	54.094	Danio_rerio
ENSMNEG00000030405	TNRC6C	100	88.915	ENSDNOG00000003247	TNRC6C	99	89.033	Dasypus_novemcinctus
ENSMNEG00000030405	TNRC6C	100	85.992	ENSDORG00000004558	Tnrc6c	100	85.874	Dipodomys_ordii
ENSMNEG00000030405	TNRC6C	90	82.957	ENSETEG00000005527	TNRC6C	86	83.539	Echinops_telfairi
ENSMNEG00000030405	TNRC6C	100	91.183	ENSEASG00005004799	TNRC6C	100	91.243	Equus_asinus_asinus
ENSMNEG00000030405	TNRC6C	100	91.183	ENSECAG00000012486	TNRC6C	99	90.553	Equus_caballus
ENSMNEG00000030405	TNRC6C	96	91.682	ENSEEUG00000010008	TNRC6C	96	92.217	Erinaceus_europaeus
ENSMNEG00000030405	TNRC6C	100	89.250	ENSFCAG00000028358	TNRC6C	100	89.191	Felis_catus
ENSMNEG00000030405	TNRC6C	100	84.428	ENSFALG00000000848	TNRC6C	100	85.997	Ficedula_albicollis
ENSMNEG00000030405	TNRC6C	100	91.297	ENSFDAG00000010368	TNRC6C	100	89.624	Fukomys_damarensis
ENSMNEG00000030405	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	46.719	Fundulus_heteroclitus
ENSMNEG00000030405	TNRC6C	100	88.698	ENSGALG00000001725	TNRC6C	100	88.521	Gallus_gallus
ENSMNEG00000030405	TNRC6C	100	48.813	ENSGAFG00000019019	tnrc6c1	100	49.117	Gambusia_affinis
ENSMNEG00000030405	TNRC6C	95	52.562	ENSGACG00000012320	tnrc6c1	97	47.916	Gasterosteus_aculeatus
ENSMNEG00000030405	TNRC6C	100	87.367	ENSGAGG00000022043	TNRC6C	99	87.486	Gopherus_agassizii
ENSMNEG00000030405	TNRC6C	100	98.302	ENSGGOG00000011304	TNRC6C	100	98.302	Gorilla_gorilla
ENSMNEG00000030405	TNRC6C	100	48.183	ENSHBUG00000010846	tnrc6c1	99	48.784	Haplochromis_burtoni
ENSMNEG00000030405	TNRC6C	100	92.658	ENSHGLG00000004809	TNRC6C	99	89.849	Heterocephalus_glaber_female
ENSMNEG00000030405	TNRC6C	100	91.632	ENSHGLG00100012597	TNRC6C	99	90.005	Heterocephalus_glaber_male
ENSMNEG00000030405	TNRC6C	99	51.068	ENSIPUG00000000818	tnrc6c1	98	51.605	Ictalurus_punctatus
ENSMNEG00000030405	TNRC6C	100	91.189	ENSSTOG00000009101	TNRC6C	100	88.852	Ictidomys_tridecemlineatus
ENSMNEG00000030405	TNRC6C	100	88.863	ENSJJAG00000017055	Tnrc6c	99	87.045	Jaculus_jaculus
ENSMNEG00000030405	TNRC6C	99	47.990	ENSKMAG00000021023	tnrc6c1	100	50.633	Kryptolebias_marmoratus
ENSMNEG00000030405	TNRC6C	100	75.601	ENSLACG00000015283	TNRC6C	100	74.138	Latimeria_chalumnae
ENSMNEG00000030405	TNRC6C	99	56.696	ENSLOCG00000013377	tnrc6c1	99	55.653	Lepisosteus_oculatus
ENSMNEG00000030405	TNRC6C	100	90.748	ENSLAFG00000011122	TNRC6C	99	88.958	Loxodonta_africana
ENSMNEG00000030405	TNRC6C	100	99.948	ENSMFAG00000043943	TNRC6C	100	99.948	Macaca_fascicularis
ENSMNEG00000030405	TNRC6C	100	99.941	ENSMMUG00000011924	TNRC6C	100	99.941	Macaca_mulatta
ENSMNEG00000030405	TNRC6C	100	99.897	ENSMLEG00000033436	TNRC6C	100	99.897	Mandrillus_leucophaeus
ENSMNEG00000030405	TNRC6C	95	53.275	ENSMAMG00000023613	tnrc6c1	100	51.001	Mastacembelus_armatus
ENSMNEG00000030405	TNRC6C	98	50.464	ENSMZEG00005010920	tnrc6c1	99	48.660	Maylandia_zebra
ENSMNEG00000030405	TNRC6C	99	80.527	ENSMGAG00000003906	TNRC6C	100	80.662	Meleagris_gallopavo
ENSMNEG00000030405	TNRC6C	100	89.570	ENSMAUG00000021618	Tnrc6c	100	89.511	Mesocricetus_auratus
ENSMNEG00000030405	TNRC6C	100	94.316	ENSMICG00000003952	TNRC6C	100	94.198	Microcebus_murinus
ENSMNEG00000030405	TNRC6C	100	91.770	ENSMOCG00000015879	Tnrc6c	100	89.288	Microtus_ochrogaster
ENSMNEG00000030405	TNRC6C	79	55.827	ENSMMOG00000005203	tnrc6c1	100	50.423	Mola_mola
ENSMNEG00000030405	TNRC6C	100	87.176	ENSMODG00000001785	TNRC6C	99	85.231	Monodelphis_domestica
ENSMNEG00000030405	TNRC6C	100	91.356	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.895	Mus_caroli
ENSMNEG00000030405	TNRC6C	100	91.001	ENSMUSG00000025571	Tnrc6c	100	88.559	Mus_musculus
ENSMNEG00000030405	TNRC6C	100	90.941	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.503	Mus_pahari
ENSMNEG00000030405	TNRC6C	100	91.060	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.615	Mus_spretus
ENSMNEG00000030405	TNRC6C	99	88.617	ENSMPUG00000013348	TNRC6C	98	88.658	Mustela_putorius_furo
ENSMNEG00000030405	TNRC6C	100	82.434	ENSMLUG00000014431	TNRC6C	98	82.099	Myotis_lucifugus
ENSMNEG00000030405	TNRC6C	100	90.689	ENSNGAG00000012203	Tnrc6c	99	89.115	Nannospalax_galili
ENSMNEG00000030405	TNRC6C	98	51.161	ENSNBRG00000005344	tnrc6c1	99	49.232	Neolamprologus_brichardi
ENSMNEG00000030405	TNRC6C	99	96.393	ENSNLEG00000000047	TNRC6C	99	96.393	Nomascus_leucogenys
ENSMNEG00000030405	TNRC6C	97	81.879	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSMNEG00000030405	TNRC6C	100	91.948	ENSODEG00000012499	TNRC6C	100	92.126	Octodon_degus
ENSMNEG00000030405	TNRC6C	94	51.338	ENSONIG00000002210	tnrc6c1	100	48.291	Oreochromis_niloticus
ENSMNEG00000030405	TNRC6C	99	63.604	ENSOANG00000009758	-	100	61.206	Ornithorhynchus_anatinus
ENSMNEG00000030405	TNRC6C	81	88.421	ENSOCUG00000006122	TNRC6C	95	79.452	Oryctolagus_cuniculus
ENSMNEG00000030405	TNRC6C	91	50.245	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSMNEG00000030405	TNRC6C	95	46.852	ENSORLG00020016510	tnrc6c1	100	49.279	Oryzias_latipes_hni
ENSMNEG00000030405	TNRC6C	72	45.227	ENSORLG00015000171	tnrc6c1	98	44.759	Oryzias_latipes_hsok
ENSMNEG00000030405	TNRC6C	91	50.983	ENSOMEG00000000357	tnrc6c1	99	48.121	Oryzias_melastigma
ENSMNEG00000030405	TNRC6C	100	90.625	ENSOGAG00000007197	TNRC6C	100	92.672	Otolemur_garnettii
ENSMNEG00000030405	TNRC6C	96	84.590	ENSOARG00000006041	TNRC6C	97	84.997	Ovis_aries
ENSMNEG00000030405	TNRC6C	100	98.875	ENSPPAG00000027160	TNRC6C	100	98.875	Pan_paniscus
ENSMNEG00000030405	TNRC6C	100	89.250	ENSPPRG00000018881	TNRC6C	100	89.191	Panthera_pardus
ENSMNEG00000030405	TNRC6C	90	85.590	ENSPTIG00000008791	TNRC6C	81	96.429	Panthera_tigris_altaica
ENSMNEG00000030405	TNRC6C	100	98.919	ENSPTRG00000009699	TNRC6C	100	98.919	Pan_troglodytes
ENSMNEG00000030405	TNRC6C	100	99.897	ENSPANG00000019994	TNRC6C	100	99.897	Papio_anubis
ENSMNEG00000030405	TNRC6C	96	51.837	ENSPKIG00000005428	tnrc6c1	100	51.183	Paramormyrops_kingsleyae
ENSMNEG00000030405	TNRC6C	100	86.399	ENSPSIG00000018069	TNRC6C	100	84.004	Pelodiscus_sinensis
ENSMNEG00000030405	TNRC6C	74	54.194	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSMNEG00000030405	TNRC6C	100	90.925	ENSPEMG00000009785	Tnrc6c	100	88.509	Peromyscus_maniculatus_bairdii
ENSMNEG00000030405	TNRC6C	58	86.154	ENSPCIG00000017421	-	99	86.008	Phascolarctos_cinereus
ENSMNEG00000030405	TNRC6C	100	48.598	ENSPFOG00000012560	tnrc6c1	97	56.788	Poecilia_formosa
ENSMNEG00000030405	TNRC6C	100	48.733	ENSPLAG00000021055	tnrc6c1	100	49.692	Poecilia_latipinna
ENSMNEG00000030405	TNRC6C	100	98.765	ENSPPYG00000008679	TNRC6C	99	98.765	Pongo_abelii
ENSMNEG00000030405	TNRC6C	93	92.654	ENSPCAG00000012510	TNRC6C	91	92.654	Procavia_capensis
ENSMNEG00000030405	TNRC6C	100	94.790	ENSPCOG00000021451	TNRC6C	100	94.790	Propithecus_coquereli
ENSMNEG00000030405	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSMNEG00000030405	TNRC6C	100	48.024	ENSPNYG00000014477	tnrc6c1	99	48.421	Pundamilia_nyererei
ENSMNEG00000030405	TNRC6C	100	90.361	ENSRNOG00000022395	Tnrc6c	100	90.361	Rattus_norvegicus
ENSMNEG00000030405	TNRC6C	100	99.408	ENSRBIG00000027777	TNRC6C	100	99.408	Rhinopithecus_bieti
ENSMNEG00000030405	TNRC6C	100	99.537	ENSRROG00000042912	TNRC6C	100	99.537	Rhinopithecus_roxellana
ENSMNEG00000030405	TNRC6C	100	97.787	ENSSBOG00000023981	TNRC6C	100	97.963	Saimiri_boliviensis_boliviensis
ENSMNEG00000030405	TNRC6C	52	86.378	ENSSHAG00000018330	-	100	88.960	Sarcophilus_harrisii
ENSMNEG00000030405	TNRC6C	93	57.252	ENSSFOG00015006475	tnrc6c1	99	51.752	Scleropages_formosus
ENSMNEG00000030405	TNRC6C	76	56.394	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSMNEG00000030405	TNRC6C	100	48.891	ENSSMAG00000012761	tnrc6c1	99	50.488	Scophthalmus_maximus
ENSMNEG00000030405	TNRC6C	100	50.771	ENSSDUG00000002366	tnrc6c1	99	49.500	Seriola_dumerili
ENSMNEG00000030405	TNRC6C	100	49.001	ENSSLDG00000025613	tnrc6c1	100	50.083	Seriola_lalandi_dorsalis
ENSMNEG00000030405	TNRC6C	91	89.655	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSMNEG00000030405	TNRC6C	81	87.500	ENSSPUG00000007341	TNRC6C	98	87.014	Sphenodon_punctatus
ENSMNEG00000030405	TNRC6C	78	54.455	ENSSPAG00000014977	tnrc6c1	97	49.144	Stegastes_partitus
ENSMNEG00000030405	TNRC6C	100	85.740	ENSSSCG00000034373	TNRC6C	100	87.987	Sus_scrofa
ENSMNEG00000030405	TNRC6C	100	88.527	ENSTGUG00000007733	TNRC6C	100	86.130	Taeniopygia_guttata
ENSMNEG00000030405	TNRC6C	79	53.474	ENSTRUG00000011685	tnrc6c1	100	49.505	Takifugu_rubripes
ENSMNEG00000030405	TNRC6C	89	52.797	ENSTNIG00000005273	tnrc6c1	100	60.621	Tetraodon_nigroviridis
ENSMNEG00000030405	TNRC6C	67	82.058	ENSTBEG00000005046	TNRC6C	100	82.410	Tupaia_belangeri
ENSMNEG00000030405	TNRC6C	100	90.952	ENSTTRG00000010828	TNRC6C	97	91.011	Tursiops_truncatus
ENSMNEG00000030405	TNRC6C	100	88.889	ENSUMAG00000013614	TNRC6C	99	89.652	Ursus_maritimus
ENSMNEG00000030405	TNRC6C	52	81.093	ENSVPAG00000006765	-	99	81.100	Vicugna_pacos
ENSMNEG00000030405	TNRC6C	100	91.780	ENSVVUG00000015268	TNRC6C	100	91.780	Vulpes_vulpes
ENSMNEG00000030405	TNRC6C	100	75.323	ENSXETG00000019470	tnrc6c	100	74.677	Xenopus_tropicalis
ENSMNEG00000030405	TNRC6C	100	49.771	ENSXMAG00000025971	tnrc6c1	100	49.034	Xiphophorus_maculatus