EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000030762 (Gene tree)
Gene ID: 105483667
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide F
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 44459 bases
Position: chrKQ009458.1:4794274-4838732
Accession: 105483667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000012978	LSM	PF01423.22	4.2e-21	1	1
ENSMNEP00000012973	LSM	PF01423.22	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000037172	-	384	-	ENSMNEP00000012973	127 (aa)	-	A0A2K6BNK8
ENSMNET00000037177	-	476	XM_011744640	ENSMNEP00000012978	86 (aa)	XP_011742942	A0A2K6BNL3

Gene Model

Click here to download ENSMNEG00000030762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000030762's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000030762	-	69	41.758	ENSMNEG00000038420	SRSF3	96	41.758
ENSMNEG00000030762	-	52	42.424	ENSMNEG00000041666	-	51	42.424
ENSMNEG00000030762	-	66	40.351	ENSMNEG00000040412	-	73	41.071
ENSMNEG00000030762	-	77	51.515	ENSMNEG00000034820	-	83	51.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000030762	-	50	97.674	ENSCHIG00000017139	-	87	91.525	Capra_hircus
ENSMNEG00000030762	-	100	100.000	ENSCATG00000003132	-	100	100.000	Cercocebus_atys
ENSMNEG00000030762	-	50	100.000	ENSCPBG00000001948	-	94	91.837	Chrysemys_picta_bellii
ENSMNEG00000030762	-	100	100.000	ENSCANG00000006758	-	100	100.000	Colobus_angolensis_palliatus
ENSMNEG00000030762	-	91	58.974	ENSFCAG00000037511	-	87	61.644	Felis_catus
ENSMNEG00000030762	-	51	90.909	ENSFCAG00000032773	-	70	90.909	Felis_catus
ENSMNEG00000030762	-	57	87.755	ENSGAGG00000014834	-	75	97.727	Gopherus_agassizii
ENSMNEG00000030762	-	100	100.000	ENSMFAG00000035517	-	100	100.000	Macaca_fascicularis
ENSMNEG00000030762	-	100	100.000	ENSMMUG00000009302	-	100	100.000	Macaca_mulatta
ENSMNEG00000030762	-	100	100.000	ENSMLEG00000033558	-	100	100.000	Mandrillus_leucophaeus
ENSMNEG00000030762	-	100	100.000	ENSNLEG00000005835	-	100	100.000	Nomascus_leucogenys
ENSMNEG00000030762	-	50	97.674	ENSOGAG00000014320	-	100	96.226	Otolemur_garnettii
ENSMNEG00000030762	-	100	100.000	ENSPPAG00000003072	-	100	100.000	Pan_paniscus
ENSMNEG00000030762	-	73	76.190	ENSPPRG00000020147	-	100	76.190	Panthera_pardus
ENSMNEG00000030762	-	100	100.000	ENSPTRG00000005317	-	100	94.488	Pan_troglodytes
ENSMNEG00000030762	-	100	100.000	ENSPANG00000014632	-	100	100.000	Papio_anubis
ENSMNEG00000030762	-	100	100.000	ENSPCIG00000017205	-	100	100.000	Phascolarctos_cinereus
ENSMNEG00000030762	-	53	93.478	ENSPFOG00000020883	-	100	93.478	Poecilia_formosa
ENSMNEG00000030762	-	100	100.000	ENSRBIG00000028811	-	100	100.000	Rhinopithecus_bieti
ENSMNEG00000030762	-	100	100.000	ENSRROG00000031057	-	100	100.000	Rhinopithecus_roxellana
ENSMNEG00000030762	-	64	78.182	ENSVVUG00000003155	-	73	78.182	Vulpes_vulpes