EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000031454 (Gene tree)
Gene ID: 105481002
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 77223 bases
Position: chrKQ004775.1:8207474-8284696
Accession: 105481002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000014683	DND1_DSRM	PF14709.7	1.7e-24	1	1
ENSMNEP00000014699	DND1_DSRM	PF14709.7	1.8e-24	1	1
ENSMNEP00000014704	DND1_DSRM	PF14709.7	1.8e-24	1	1
ENSMNEP00000014704	RRM_1	PF00076.22	6.5e-39	1	3
ENSMNEP00000014704	RRM_1	PF00076.22	6.5e-39	2	3
ENSMNEP00000014704	RRM_1	PF00076.22	6.5e-39	3	3
ENSMNEP00000014683	RRM_1	PF00076.22	7.3e-39	1	3
ENSMNEP00000014683	RRM_1	PF00076.22	7.3e-39	2	3
ENSMNEP00000014683	RRM_1	PF00076.22	7.3e-39	3	3
ENSMNEP00000014699	RRM_1	PF00076.22	8.8e-39	1	3
ENSMNEP00000014699	RRM_1	PF00076.22	8.8e-39	2	3
ENSMNEP00000014699	RRM_1	PF00076.22	8.8e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000038909	A1CF-203	1692	-	ENSMNEP00000014704	563 (aa)	-	A0A2K6BTG5
ENSMNET00000038887	A1CF-201	2093	XM_011740244	ENSMNEP00000014683	584 (aa)	XP_011738546	A0A2K6BTE7
ENSMNET00000038904	A1CF-202	1803	XM_011740257	ENSMNEP00000014699	600 (aa)	XP_011738559	A0A2K6BTG0

Gene Model

Click here to download ENSMNEG00000031454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000031454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000031454	A1CF	54	52.427	ENSMNEG00000042077	SYNCRIP	57	51.077
ENSMNEG00000031454	A1CF	71	73.000	ENSMNEG00000002787	RBM46	85	73.000
ENSMNEG00000031454	A1CF	78	58.628	ENSMNEG00000040774	RBM47	87	68.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000031454	A1CF	100	97.785	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSMNEG00000031454	A1CF	100	74.368	ENSAPOG00000008259	a1cf	100	74.368	Acanthochromis_polyacanthus
ENSMNEG00000031454	A1CF	100	94.426	ENSAMEG00000000523	A1CF	100	94.426	Ailuropoda_melanoleuca
ENSMNEG00000031454	A1CF	100	76.198	ENSACIG00000008632	a1cf	100	77.355	Amphilophus_citrinellus
ENSMNEG00000031454	A1CF	100	75.042	ENSAOCG00000023744	a1cf	96	84.348	Amphiprion_ocellaris
ENSMNEG00000031454	A1CF	100	73.892	ENSAPEG00000009537	a1cf	100	74.713	Amphiprion_percula
ENSMNEG00000031454	A1CF	100	76.568	ENSATEG00000013720	a1cf	100	77.888	Anabas_testudineus
ENSMNEG00000031454	A1CF	100	88.027	ENSAPLG00000002964	A1CF	100	88.027	Anas_platyrhynchos
ENSMNEG00000031454	A1CF	100	85.128	ENSACAG00000015269	A1CF	100	85.128	Anolis_carolinensis
ENSMNEG00000031454	A1CF	100	98.294	ENSANAG00000019974	A1CF	100	98.294	Aotus_nancymaae
ENSMNEG00000031454	A1CF	100	74.709	ENSACLG00000017428	a1cf	100	76.206	Astatotilapia_calliptera
ENSMNEG00000031454	A1CF	100	72.893	ENSAMXG00000018180	a1cf	100	73.058	Astyanax_mexicanus
ENSMNEG00000031454	A1CF	100	94.889	ENSBTAG00000021195	A1CF	100	96.097	Bos_taurus
ENSMNEG00000031454	A1CF	100	97.306	ENSCJAG00000005045	A1CF	100	97.306	Callithrix_jacchus
ENSMNEG00000031454	A1CF	100	93.750	ENSCAFG00000015581	A1CF	100	94.257	Canis_familiaris
ENSMNEG00000031454	A1CF	100	93.750	ENSCAFG00020026421	A1CF	100	94.257	Canis_lupus_dingo
ENSMNEG00000031454	A1CF	100	93.277	ENSCHIG00000020411	A1CF	100	93.445	Capra_hircus
ENSMNEG00000031454	A1CF	100	92.833	ENSTSYG00000001755	A1CF	100	97.096	Carlito_syrichta
ENSMNEG00000031454	A1CF	100	83.129	ENSCAPG00000017386	A1CF	90	94.737	Cavia_aperea
ENSMNEG00000031454	A1CF	100	95.118	ENSCPOG00000009807	A1CF	100	94.444	Cavia_porcellus
ENSMNEG00000031454	A1CF	100	97.302	ENSCCAG00000018168	A1CF	100	97.302	Cebus_capucinus
ENSMNEG00000031454	A1CF	100	99.486	ENSCATG00000043715	A1CF	100	99.486	Cercocebus_atys
ENSMNEG00000031454	A1CF	100	94.631	ENSCLAG00000010424	A1CF	100	94.295	Chinchilla_lanigera
ENSMNEG00000031454	A1CF	100	97.973	ENSCSAG00000007032	A1CF	100	97.973	Chlorocebus_sabaeus
ENSMNEG00000031454	A1CF	99	90.365	ENSCHOG00000009089	A1CF	99	90.365	Choloepus_hoffmanni
ENSMNEG00000031454	A1CF	99	89.127	ENSCPBG00000026464	A1CF	100	87.352	Chrysemys_picta_bellii
ENSMNEG00000031454	A1CF	100	97.973	ENSCANG00000038032	A1CF	100	97.973	Colobus_angolensis_palliatus
ENSMNEG00000031454	A1CF	100	92.773	ENSCGRG00001017413	A1cf	100	92.773	Cricetulus_griseus_chok1gshd
ENSMNEG00000031454	A1CF	100	91.933	ENSCGRG00000017332	A1cf	100	92.605	Cricetulus_griseus_crigri
ENSMNEG00000031454	A1CF	100	73.466	ENSCSEG00000002361	a1cf	100	74.793	Cynoglossus_semilaevis
ENSMNEG00000031454	A1CF	100	75.413	ENSCVAG00000010520	a1cf	100	76.898	Cyprinodon_variegatus
ENSMNEG00000031454	A1CF	100	78.983	ENSDARG00000002968	a1cf	100	80.339	Danio_rerio
ENSMNEG00000031454	A1CF	100	93.445	ENSDNOG00000002829	A1CF	100	93.445	Dasypus_novemcinctus
ENSMNEG00000031454	A1CF	82	92.754	ENSETEG00000012527	A1CF	84	91.003	Echinops_telfairi
ENSMNEG00000031454	A1CF	100	95.142	ENSEASG00005012924	A1CF	100	95.142	Equus_asinus_asinus
ENSMNEG00000031454	A1CF	100	94.137	ENSECAG00000010424	A1CF	100	94.305	Equus_caballus
ENSMNEG00000031454	A1CF	82	80.258	ENSEEUG00000000013	A1CF	99	79.787	Erinaceus_europaeus
ENSMNEG00000031454	A1CF	100	77.592	ENSELUG00000003159	a1cf	100	78.428	Esox_lucius
ENSMNEG00000031454	A1CF	100	94.521	ENSFCAG00000011179	A1CF	100	94.521	Felis_catus
ENSMNEG00000031454	A1CF	100	87.350	ENSFALG00000013183	A1CF	100	87.350	Ficedula_albicollis
ENSMNEG00000031454	A1CF	100	95.400	ENSFDAG00000019371	A1CF	100	95.060	Fukomys_damarensis
ENSMNEG00000031454	A1CF	100	70.627	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSMNEG00000031454	A1CF	100	70.083	ENSGMOG00000018943	a1cf	100	70.413	Gadus_morhua
ENSMNEG00000031454	A1CF	99	84.590	ENSGALG00000003765	A1CF	97	87.189	Gallus_gallus
ENSMNEG00000031454	A1CF	100	70.833	ENSGAFG00000014868	a1cf	100	71.833	Gambusia_affinis
ENSMNEG00000031454	A1CF	100	72.697	ENSGACG00000010241	a1cf	100	73.355	Gasterosteus_aculeatus
ENSMNEG00000031454	A1CF	94	88.826	ENSGAGG00000016508	A1CF	98	87.965	Gopherus_agassizii
ENSMNEG00000031454	A1CF	100	97.015	ENSGGOG00000009670	A1CF	100	97.015	Gorilla_gorilla
ENSMNEG00000031454	A1CF	100	75.702	ENSHBUG00000021959	a1cf	100	77.025	Haplochromis_burtoni
ENSMNEG00000031454	A1CF	100	94.790	ENSHGLG00000008955	A1CF	100	94.454	Heterocephalus_glaber_female
ENSMNEG00000031454	A1CF	100	94.118	ENSHGLG00100000518	A1CF	100	93.782	Heterocephalus_glaber_male
ENSMNEG00000031454	A1CF	99	71.429	ENSHCOG00000017669	a1cf	100	71.778	Hippocampus_comes
ENSMNEG00000031454	A1CF	94	82.836	ENSIPUG00000010367	a1cf	96	82.836	Ictalurus_punctatus
ENSMNEG00000031454	A1CF	100	75.610	ENSKMAG00000006568	a1cf	100	76.423	Kryptolebias_marmoratus
ENSMNEG00000031454	A1CF	99	73.977	ENSLBEG00000020994	a1cf	98	75.783	Labrus_bergylta
ENSMNEG00000031454	A1CF	100	82.823	ENSLACG00000008061	A1CF	100	82.823	Latimeria_chalumnae
ENSMNEG00000031454	A1CF	100	81.240	ENSLOCG00000006302	a1cf	100	81.240	Lepisosteus_oculatus
ENSMNEG00000031454	A1CF	100	93.277	ENSLAFG00000015462	A1CF	100	93.277	Loxodonta_africana
ENSMNEG00000031454	A1CF	100	99.658	ENSMFAG00000035948	A1CF	100	99.658	Macaca_fascicularis
ENSMNEG00000031454	A1CF	100	99.658	ENSMMUG00000007077	A1CF	100	99.658	Macaca_mulatta
ENSMNEG00000031454	A1CF	100	98.230	ENSMLEG00000037223	A1CF	100	98.230	Mandrillus_leucophaeus
ENSMNEG00000031454	A1CF	100	74.295	ENSMAMG00000010402	a1cf	100	76.325	Mastacembelus_armatus
ENSMNEG00000031454	A1CF	100	74.707	ENSMZEG00005013245	a1cf	100	75.712	Maylandia_zebra
ENSMNEG00000031454	A1CF	100	87.374	ENSMGAG00000001507	A1CF	100	87.374	Meleagris_gallopavo
ENSMNEG00000031454	A1CF	100	92.101	ENSMAUG00000007422	A1cf	100	92.605	Mesocricetus_auratus
ENSMNEG00000031454	A1CF	100	95.932	ENSMICG00000003377	A1CF	100	95.932	Microcebus_murinus
ENSMNEG00000031454	A1CF	100	92.101	ENSMOCG00000021536	A1cf	100	92.269	Microtus_ochrogaster
ENSMNEG00000031454	A1CF	100	68.053	ENSMMOG00000009422	a1cf	100	70.000	Mola_mola
ENSMNEG00000031454	A1CF	97	89.744	ENSMODG00000016478	A1CF	99	91.248	Monodelphis_domestica
ENSMNEG00000031454	A1CF	100	72.835	ENSMALG00000012992	a1cf	100	72.835	Monopterus_albus
ENSMNEG00000031454	A1CF	100	93.015	MGP_CAROLIEiJ_G0022873	A1cf	100	93.526	Mus_caroli
ENSMNEG00000031454	A1CF	100	93.015	ENSMUSG00000052595	A1cf	99	95.801	Mus_musculus
ENSMNEG00000031454	A1CF	100	92.845	MGP_PahariEiJ_G0014366	A1cf	100	92.845	Mus_pahari
ENSMNEG00000031454	A1CF	100	92.504	MGP_SPRETEiJ_G0023792	A1cf	100	93.015	Mus_spretus
ENSMNEG00000031454	A1CF	100	88.682	ENSMPUG00000016971	A1CF	100	88.682	Mustela_putorius_furo
ENSMNEG00000031454	A1CF	100	92.605	ENSMLUG00000016071	A1CF	100	92.605	Myotis_lucifugus
ENSMNEG00000031454	A1CF	100	93.277	ENSNGAG00000015136	A1cf	100	93.445	Nannospalax_galili
ENSMNEG00000031454	A1CF	100	76.198	ENSNBRG00000001712	a1cf	100	77.521	Neolamprologus_brichardi
ENSMNEG00000031454	A1CF	100	97.479	ENSNLEG00000012028	A1CF	100	97.479	Nomascus_leucogenys
ENSMNEG00000031454	A1CF	94	91.486	ENSMEUG00000015909	A1CF	100	91.304	Notamacropus_eugenii
ENSMNEG00000031454	A1CF	93	84.952	ENSOPRG00000010667	A1CF	97	85.094	Ochotona_princeps
ENSMNEG00000031454	A1CF	100	75.372	ENSONIG00000019105	a1cf	100	77.025	Oreochromis_niloticus
ENSMNEG00000031454	A1CF	82	88.651	ENSOANG00000007360	A1CF	99	90.196	Ornithorhynchus_anatinus
ENSMNEG00000031454	A1CF	100	94.048	ENSOCUG00000011587	A1CF	100	94.728	Oryctolagus_cuniculus
ENSMNEG00000031454	A1CF	100	72.520	ENSORLG00000013342	a1cf	100	72.520	Oryzias_latipes
ENSMNEG00000031454	A1CF	100	73.977	ENSORLG00020000586	a1cf	100	74.346	Oryzias_latipes_hni
ENSMNEG00000031454	A1CF	100	74.141	ENSORLG00015018569	a1cf	100	74.510	Oryzias_latipes_hsok
ENSMNEG00000031454	A1CF	100	75.456	ENSOMEG00000013531	a1cf	100	75.456	Oryzias_melastigma
ENSMNEG00000031454	A1CF	100	94.595	ENSOGAG00000012884	A1CF	100	94.595	Otolemur_garnettii
ENSMNEG00000031454	A1CF	100	93.109	ENSOARG00000013695	A1CF	100	93.277	Ovis_aries
ENSMNEG00000031454	A1CF	100	97.181	ENSPPAG00000028115	A1CF	100	98.583	Pan_paniscus
ENSMNEG00000031454	A1CF	100	93.581	ENSPPRG00000012180	A1CF	100	93.581	Panthera_pardus
ENSMNEG00000031454	A1CF	100	93.581	ENSPTIG00000021223	A1CF	100	93.581	Panthera_tigris_altaica
ENSMNEG00000031454	A1CF	100	97.785	ENSPTRG00000002508	A1CF	100	97.785	Pan_troglodytes
ENSMNEG00000031454	A1CF	100	99.658	ENSPANG00000021988	A1CF	100	99.658	Papio_anubis
ENSMNEG00000031454	A1CF	100	79.264	ENSPKIG00000025176	a1cf	100	79.097	Paramormyrops_kingsleyae
ENSMNEG00000031454	A1CF	100	88.718	ENSPSIG00000010318	A1CF	100	88.547	Pelodiscus_sinensis
ENSMNEG00000031454	A1CF	93	71.048	ENSPMGG00000013359	a1cf	99	68.522	Periophthalmus_magnuspinnatus
ENSMNEG00000031454	A1CF	100	93.782	ENSPEMG00000015021	A1cf	100	93.613	Peromyscus_maniculatus_bairdii
ENSMNEG00000031454	A1CF	100	90.940	ENSPCIG00000002175	A1CF	100	90.769	Phascolarctos_cinereus
ENSMNEG00000031454	A1CF	100	74.593	ENSPFOG00000007437	-	100	76.059	Poecilia_formosa
ENSMNEG00000031454	A1CF	100	74.756	ENSPFOG00000006683	a1cf	100	76.221	Poecilia_formosa
ENSMNEG00000031454	A1CF	100	75.578	ENSPLAG00000001210	-	100	77.063	Poecilia_latipinna
ENSMNEG00000031454	A1CF	100	75.578	ENSPLAG00000000026	a1cf	100	77.063	Poecilia_latipinna
ENSMNEG00000031454	A1CF	100	67.320	ENSPMEG00000015529	-	100	68.791	Poecilia_mexicana
ENSMNEG00000031454	A1CF	100	68.212	ENSPMEG00000000921	a1cf	100	69.702	Poecilia_mexicana
ENSMNEG00000031454	A1CF	100	74.430	ENSPREG00000016298	a1cf	100	75.896	Poecilia_reticulata
ENSMNEG00000031454	A1CF	100	98.637	ENSPPYG00000002819	A1CF	100	98.637	Pongo_abelii
ENSMNEG00000031454	A1CF	79	75.000	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSMNEG00000031454	A1CF	100	94.966	ENSPCOG00000024172	A1CF	100	94.966	Propithecus_coquereli
ENSMNEG00000031454	A1CF	100	74.878	ENSPNYG00000017944	a1cf	100	76.183	Pundamilia_nyererei
ENSMNEG00000031454	A1CF	100	80.369	ENSPNAG00000007704	a1cf	100	80.369	Pygocentrus_nattereri
ENSMNEG00000031454	A1CF	100	93.356	ENSRNOG00000033195	A1cf	100	93.867	Rattus_norvegicus
ENSMNEG00000031454	A1CF	100	91.582	ENSRBIG00000042892	A1CF	100	98.400	Rhinopithecus_bieti
ENSMNEG00000031454	A1CF	100	98.311	ENSRROG00000041398	A1CF	100	98.311	Rhinopithecus_roxellana
ENSMNEG00000031454	A1CF	100	96.807	ENSSBOG00000021930	A1CF	100	97.813	Saimiri_boliviensis_boliviensis
ENSMNEG00000031454	A1CF	100	89.744	ENSSHAG00000005096	A1CF	100	89.744	Sarcophilus_harrisii
ENSMNEG00000031454	A1CF	100	79.496	ENSSFOG00015011774	a1cf	100	79.496	Scleropages_formosus
ENSMNEG00000031454	A1CF	100	73.941	ENSSMAG00000013271	a1cf	100	74.267	Scophthalmus_maximus
ENSMNEG00000031454	A1CF	100	75.124	ENSSDUG00000013930	a1cf	100	75.954	Seriola_dumerili
ENSMNEG00000031454	A1CF	100	70.234	ENSSLDG00000004290	a1cf	100	71.237	Seriola_lalandi_dorsalis
ENSMNEG00000031454	A1CF	99	80.840	ENSSARG00000005940	A1CF	96	84.946	Sorex_araneus
ENSMNEG00000031454	A1CF	99	84.975	ENSSPUG00000006797	A1CF	99	84.140	Sphenodon_punctatus
ENSMNEG00000031454	A1CF	100	93.782	ENSSSCG00000010431	A1CF	100	93.950	Sus_scrofa
ENSMNEG00000031454	A1CF	100	85.953	ENSTGUG00000005090	A1CF	100	85.953	Taeniopygia_guttata
ENSMNEG00000031454	A1CF	98	75.220	ENSTRUG00000001982	a1cf	100	73.083	Takifugu_rubripes
ENSMNEG00000031454	A1CF	100	73.984	ENSTNIG00000003580	a1cf	100	73.659	Tetraodon_nigroviridis
ENSMNEG00000031454	A1CF	100	85.904	ENSTTRG00000013190	A1CF	100	86.070	Tursiops_truncatus
ENSMNEG00000031454	A1CF	100	95.719	ENSUAMG00000020065	A1CF	100	95.719	Ursus_americanus
ENSMNEG00000031454	A1CF	100	93.919	ENSUMAG00000011162	A1CF	100	93.919	Ursus_maritimus
ENSMNEG00000031454	A1CF	87	90.838	ENSVPAG00000006130	A1CF	86	90.838	Vicugna_pacos
ENSMNEG00000031454	A1CF	100	95.205	ENSVVUG00000002504	A1CF	100	95.377	Vulpes_vulpes
ENSMNEG00000031454	A1CF	100	77.889	ENSXETG00000006611	a1cf	100	77.722	Xenopus_tropicalis
ENSMNEG00000031454	A1CF	100	76.910	ENSXCOG00000003302	a1cf	100	77.907	Xiphophorus_couchianus
ENSMNEG00000031454	A1CF	100	75.902	ENSXMAG00000016703	a1cf	100	76.885	Xiphophorus_maculatus