EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000032398 (Gene tree)
Gene ID: 105490034
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 30765 bases
Position: chrKQ005265.1:677036-707800
Accession: 105490034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000018177	ResIII	PF04851.15	1.1e-25	1	2
ENSMNEP00000018177	ResIII	PF04851.15	1.1e-25	2	2
ENSMNEP00000018156	ResIII	PF04851.15	1.2e-25	1	2
ENSMNEP00000018156	ResIII	PF04851.15	1.2e-25	2	2
ENSMNEP00000018125	ResIII	PF04851.15	1.2e-25	1	2
ENSMNEP00000018125	ResIII	PF04851.15	1.2e-25	2	2
ENSMNEP00000018199	ResIII	PF04851.15	4.6e-12	1	1
ENSMNEP00000018193	ResIII	PF04851.15	1.8e-10	1	1
ENSMNEP00000018177	DEAD	PF00270.29	7.1e-52	1	2
ENSMNEP00000018177	DEAD	PF00270.29	7.1e-52	2	2
ENSMNEP00000018156	DEAD	PF00270.29	7.2e-52	1	2
ENSMNEP00000018156	DEAD	PF00270.29	7.2e-52	2	2
ENSMNEP00000018125	DEAD	PF00270.29	7.2e-52	1	2
ENSMNEP00000018125	DEAD	PF00270.29	7.2e-52	2	2
ENSMNEP00000018199	DEAD	PF00270.29	8e-25	1	1
ENSMNEP00000018193	DEAD	PF00270.29	1.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000042389	SNRNP200-202	6408	-	ENSMNEP00000018156	2135 (aa)	-	A0A2K6C3B3
ENSMNET00000042428	SNRNP200-204	2073	-	ENSMNEP00000018193	690 (aa)	-	A0A2K6C3G8
ENSMNET00000042434	SNRNP200-205	3306	-	ENSMNEP00000018199	1101 (aa)	-	A0A2K6C3G9
ENSMNET00000042358	SNRNP200-201	7197	XM_011755251	ENSMNEP00000018125	2136 (aa)	XP_011753553	A0A2K6C382
ENSMNET00000042412	SNRNP200-203	6366	-	ENSMNEP00000018177	2121 (aa)	-	A0A2K6C3D5

Gene Model

Click here to download ENSMNEG00000032398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000032398's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000032398	SNRNP200	86	44.560	ENSMNEG00000032760	ASCC3	74	47.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000032398	SNRNP200	100	99.906	ENSG00000144028	SNRNP200	100	99.906	Homo_sapiens
ENSMNEG00000032398	SNRNP200	99	90.794	ENSAPOG00000010223	snrnp200	99	90.684	Acanthochromis_polyacanthus
ENSMNEG00000032398	SNRNP200	100	99.766	ENSAMEG00000008996	SNRNP200	100	99.766	Ailuropoda_melanoleuca
ENSMNEG00000032398	SNRNP200	97	90.150	ENSACIG00000001764	snrnp200	98	90.150	Amphilophus_citrinellus
ENSMNEG00000032398	SNRNP200	99	90.700	ENSAOCG00000024593	snrnp200	100	89.936	Amphiprion_ocellaris
ENSMNEG00000032398	SNRNP200	97	89.989	ENSAPEG00000012554	snrnp200	100	89.989	Amphiprion_percula
ENSMNEG00000032398	SNRNP200	99	90.559	ENSATEG00000022522	snrnp200	99	90.449	Anabas_testudineus
ENSMNEG00000032398	SNRNP200	99	97.595	ENSAPLG00000004313	SNRNP200	100	97.595	Anas_platyrhynchos
ENSMNEG00000032398	SNRNP200	99	97.485	ENSACAG00000000434	SNRNP200	100	97.485	Anolis_carolinensis
ENSMNEG00000032398	SNRNP200	100	95.336	ENSANAG00000036625	SNRNP200	100	95.756	Aotus_nancymaae
ENSMNEG00000032398	SNRNP200	99	90.418	ENSACLG00000011188	snrnp200	99	90.309	Astatotilapia_calliptera
ENSMNEG00000032398	SNRNP200	99	90.512	ENSAMXG00000005684	snrnp200	99	90.403	Astyanax_mexicanus
ENSMNEG00000032398	SNRNP200	100	99.204	ENSBTAG00000000848	SNRNP200	100	99.204	Bos_taurus
ENSMNEG00000032398	SNRNP200	100	99.860	ENSCJAG00000007514	SNRNP200	100	99.860	Callithrix_jacchus
ENSMNEG00000032398	SNRNP200	100	99.855	ENSCAFG00020019979	SNRNP200	100	99.855	Canis_lupus_dingo
ENSMNEG00000032398	SNRNP200	100	99.391	ENSCHIG00000020611	SNRNP200	100	99.391	Capra_hircus
ENSMNEG00000032398	SNRNP200	100	99.855	ENSTSYG00000010467	SNRNP200	100	99.855	Carlito_syrichta
ENSMNEG00000032398	SNRNP200	99	99.342	ENSCAPG00000017234	SNRNP200	99	99.342	Cavia_aperea
ENSMNEG00000032398	SNRNP200	100	99.625	ENSCPOG00000006776	SNRNP200	100	99.625	Cavia_porcellus
ENSMNEG00000032398	SNRNP200	100	99.860	ENSCCAG00000033962	SNRNP200	100	99.860	Cebus_capucinus
ENSMNEG00000032398	SNRNP200	100	99.906	ENSCATG00000015790	SNRNP200	100	99.906	Cercocebus_atys
ENSMNEG00000032398	SNRNP200	100	99.485	ENSCLAG00000004116	SNRNP200	100	99.485	Chinchilla_lanigera
ENSMNEG00000032398	SNRNP200	100	99.860	ENSCSAG00000017369	SNRNP200	100	99.860	Chlorocebus_sabaeus
ENSMNEG00000032398	SNRNP200	77	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSMNEG00000032398	SNRNP200	100	97.662	ENSCPBG00000022571	SNRNP200	100	97.662	Chrysemys_picta_bellii
ENSMNEG00000032398	SNRNP200	99	76.506	ENSCING00000005082	-	99	76.646	Ciona_intestinalis
ENSMNEG00000032398	SNRNP200	100	94.395	ENSCANG00000033932	SNRNP200	100	99.851	Colobus_angolensis_palliatus
ENSMNEG00000032398	SNRNP200	100	99.672	ENSCGRG00001022610	Snrnp200	100	99.672	Cricetulus_griseus_chok1gshd
ENSMNEG00000032398	SNRNP200	100	99.112	ENSCGRG00000016472	Snrnp200	100	99.112	Cricetulus_griseus_crigri
ENSMNEG00000032398	SNRNP200	100	89.794	ENSCSEG00000016399	snrnp200	100	89.794	Cynoglossus_semilaevis
ENSMNEG00000032398	SNRNP200	100	85.534	ENSCVAG00000017631	snrnp200	99	85.534	Cyprinodon_variegatus
ENSMNEG00000032398	SNRNP200	100	90.262	ENSDARG00000077536	snrnp200	99	90.262	Danio_rerio
ENSMNEG00000032398	SNRNP200	100	98.632	ENSDNOG00000011227	SNRNP200	100	98.268	Dasypus_novemcinctus
ENSMNEG00000032398	SNRNP200	100	97.055	ENSDORG00000005861	Snrnp200	100	97.055	Dipodomys_ordii
ENSMNEG00000032398	SNRNP200	100	74.209	FBgn0263599	l(3)72Ab	99	74.115	Drosophila_melanogaster
ENSMNEG00000032398	SNRNP200	100	98.784	ENSETEG00000000162	SNRNP200	74	99.655	Echinops_telfairi
ENSMNEG00000032398	SNRNP200	83	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSMNEG00000032398	SNRNP200	100	98.648	ENSEASG00005001884	SNRNP200	100	98.648	Equus_asinus_asinus
ENSMNEG00000032398	SNRNP200	100	99.766	ENSECAG00000019675	SNRNP200	100	99.766	Equus_caballus
ENSMNEG00000032398	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSMNEG00000032398	SNRNP200	99	90.794	ENSELUG00000018948	snrnp200	99	90.684	Esox_lucius
ENSMNEG00000032398	SNRNP200	100	99.813	ENSFCAG00000010699	SNRNP200	100	99.813	Felis_catus
ENSMNEG00000032398	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSMNEG00000032398	SNRNP200	100	99.532	ENSFDAG00000004683	SNRNP200	100	99.532	Fukomys_damarensis
ENSMNEG00000032398	SNRNP200	100	87.687	ENSFHEG00000003786	snrnp200	99	87.687	Fundulus_heteroclitus
ENSMNEG00000032398	SNRNP200	100	89.579	ENSGMOG00000004881	snrnp200	99	89.533	Gadus_morhua
ENSMNEG00000032398	SNRNP200	100	87.921	ENSGAFG00000010807	snrnp200	99	87.921	Gambusia_affinis
ENSMNEG00000032398	SNRNP200	100	89.911	ENSGACG00000011474	snrnp200	99	89.818	Gasterosteus_aculeatus
ENSMNEG00000032398	SNRNP200	95	97.584	ENSGAGG00000016069	SNRNP200	99	97.584	Gopherus_agassizii
ENSMNEG00000032398	SNRNP200	100	99.906	ENSGGOG00000005174	SNRNP200	100	99.906	Gorilla_gorilla
ENSMNEG00000032398	SNRNP200	97	87.673	ENSHBUG00000011322	snrnp200	99	87.720	Haplochromis_burtoni
ENSMNEG00000032398	SNRNP200	100	99.625	ENSHGLG00000006654	SNRNP200	100	99.625	Heterocephalus_glaber_female
ENSMNEG00000032398	SNRNP200	100	99.625	ENSHGLG00100018594	SNRNP200	100	99.625	Heterocephalus_glaber_male
ENSMNEG00000032398	SNRNP200	50	81.556	ENSIPUG00000007770	-	89	81.525	Ictalurus_punctatus
ENSMNEG00000032398	SNRNP200	100	99.766	ENSSTOG00000016351	SNRNP200	100	99.766	Ictidomys_tridecemlineatus
ENSMNEG00000032398	SNRNP200	100	99.579	ENSJJAG00000023659	Snrnp200	100	99.579	Jaculus_jaculus
ENSMNEG00000032398	SNRNP200	100	87.448	ENSKMAG00000003665	snrnp200	99	87.448	Kryptolebias_marmoratus
ENSMNEG00000032398	SNRNP200	100	90.169	ENSLBEG00000021585	snrnp200	99	90.169	Labrus_bergylta
ENSMNEG00000032398	SNRNP200	82	94.664	ENSLACG00000000226	SNRNP200	99	94.664	Latimeria_chalumnae
ENSMNEG00000032398	SNRNP200	100	92.088	ENSLOCG00000015198	snrnp200	99	92.088	Lepisosteus_oculatus
ENSMNEG00000032398	SNRNP200	100	99.391	ENSLAFG00000015626	SNRNP200	100	99.391	Loxodonta_africana
ENSMNEG00000032398	SNRNP200	100	99.953	ENSMFAG00000040174	SNRNP200	100	99.953	Macaca_fascicularis
ENSMNEG00000032398	SNRNP200	100	99.953	ENSMMUG00000023261	SNRNP200	100	99.953	Macaca_mulatta
ENSMNEG00000032398	SNRNP200	100	99.906	ENSMLEG00000019083	SNRNP200	100	99.906	Mandrillus_leucophaeus
ENSMNEG00000032398	SNRNP200	100	90.126	ENSMAMG00000007851	snrnp200	99	90.080	Mastacembelus_armatus
ENSMNEG00000032398	SNRNP200	97	87.673	ENSMZEG00005010787	snrnp200	99	87.720	Maylandia_zebra
ENSMNEG00000032398	SNRNP200	97	97.146	ENSMGAG00000001831	SNRNP200	100	97.146	Meleagris_gallopavo
ENSMNEG00000032398	SNRNP200	100	99.719	ENSMAUG00000011825	Snrnp200	100	99.719	Mesocricetus_auratus
ENSMNEG00000032398	SNRNP200	100	99.766	ENSMICG00000004710	SNRNP200	100	99.766	Microcebus_murinus
ENSMNEG00000032398	SNRNP200	100	97.144	ENSMOCG00000011814	Snrnp200	100	97.144	Microtus_ochrogaster
ENSMNEG00000032398	SNRNP200	99	88.915	ENSMMOG00000014167	snrnp200	99	88.811	Mola_mola
ENSMNEG00000032398	SNRNP200	100	98.876	ENSMODG00000008475	SNRNP200	100	98.876	Monodelphis_domestica
ENSMNEG00000032398	SNRNP200	99	90.700	ENSMALG00000001973	snrnp200	99	90.590	Monopterus_albus
ENSMNEG00000032398	SNRNP200	100	99.532	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.532	Mus_caroli
ENSMNEG00000032398	SNRNP200	100	99.579	ENSMUSG00000003660	Snrnp200	100	99.579	Mus_musculus
ENSMNEG00000032398	SNRNP200	100	99.625	MGP_PahariEiJ_G0025695	Snrnp200	100	99.625	Mus_pahari
ENSMNEG00000032398	SNRNP200	100	99.579	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSMNEG00000032398	SNRNP200	100	99.719	ENSMPUG00000008949	SNRNP200	100	99.719	Mustela_putorius_furo
ENSMNEG00000032398	SNRNP200	100	95.459	ENSMLUG00000027511	-	100	95.459	Myotis_lucifugus
ENSMNEG00000032398	SNRNP200	100	99.158	ENSMLUG00000010493	SNRNP200	100	99.158	Myotis_lucifugus
ENSMNEG00000032398	SNRNP200	100	99.813	ENSNGAG00000021993	Snrnp200	100	99.813	Nannospalax_galili
ENSMNEG00000032398	SNRNP200	90	90.203	ENSNBRG00000017960	snrnp200	98	90.203	Neolamprologus_brichardi
ENSMNEG00000032398	SNRNP200	100	98.480	ENSNLEG00000000025	SNRNP200	100	96.232	Nomascus_leucogenys
ENSMNEG00000032398	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSMNEG00000032398	SNRNP200	100	95.880	ENSOPRG00000015464	SNRNP200	100	95.880	Ochotona_princeps
ENSMNEG00000032398	SNRNP200	100	99.485	ENSODEG00000008366	SNRNP200	100	99.485	Octodon_degus
ENSMNEG00000032398	SNRNP200	99	90.418	ENSONIG00000010714	snrnp200	99	90.309	Oreochromis_niloticus
ENSMNEG00000032398	SNRNP200	100	99.672	ENSOCUG00000009864	SNRNP200	100	99.672	Oryctolagus_cuniculus
ENSMNEG00000032398	SNRNP200	100	90.215	ENSORLG00000012286	snrnp200	100	90.215	Oryzias_latipes
ENSMNEG00000032398	SNRNP200	100	90.262	ENSORLG00020004648	snrnp200	100	90.262	Oryzias_latipes_hni
ENSMNEG00000032398	SNRNP200	100	90.215	ENSORLG00015019114	snrnp200	100	90.236	Oryzias_latipes_hsok
ENSMNEG00000032398	SNRNP200	99	90.465	ENSOMEG00000011834	snrnp200	99	90.356	Oryzias_melastigma
ENSMNEG00000032398	SNRNP200	100	99.813	ENSOGAG00000006879	SNRNP200	100	99.813	Otolemur_garnettii
ENSMNEG00000032398	SNRNP200	100	98.936	ENSOARG00000013949	SNRNP200	100	98.362	Ovis_aries
ENSMNEG00000032398	SNRNP200	100	99.906	ENSPPAG00000041559	SNRNP200	100	99.906	Pan_paniscus
ENSMNEG00000032398	SNRNP200	100	99.813	ENSPPRG00000004435	SNRNP200	100	99.813	Panthera_pardus
ENSMNEG00000032398	SNRNP200	100	99.345	ENSPTIG00000006380	SNRNP200	100	99.345	Panthera_tigris_altaica
ENSMNEG00000032398	SNRNP200	100	99.906	ENSPTRG00000012230	SNRNP200	100	99.906	Pan_troglodytes
ENSMNEG00000032398	SNRNP200	100	99.860	ENSPANG00000006017	SNRNP200	100	99.860	Papio_anubis
ENSMNEG00000032398	SNRNP200	100	91.011	ENSPKIG00000014762	snrnp200	99	91.011	Paramormyrops_kingsleyae
ENSMNEG00000032398	SNRNP200	100	97.117	ENSPSIG00000008580	SNRNP200	100	96.631	Pelodiscus_sinensis
ENSMNEG00000032398	SNRNP200	100	98.986	ENSPEMG00000020700	-	100	99.387	Peromyscus_maniculatus_bairdii
ENSMNEG00000032398	SNRNP200	100	98.876	ENSPCIG00000023050	SNRNP200	100	98.876	Phascolarctos_cinereus
ENSMNEG00000032398	SNRNP200	100	90.267	ENSPFOG00000015110	snrnp200	99	90.267	Poecilia_formosa
ENSMNEG00000032398	SNRNP200	97	90.110	ENSPLAG00000006711	snrnp200	99	90.110	Poecilia_latipinna
ENSMNEG00000032398	SNRNP200	97	90.055	ENSPMEG00000021166	snrnp200	99	90.055	Poecilia_mexicana
ENSMNEG00000032398	SNRNP200	100	90.356	ENSPREG00000008875	snrnp200	99	90.356	Poecilia_reticulata
ENSMNEG00000032398	SNRNP200	100	99.906	ENSPPYG00000012068	SNRNP200	100	99.906	Pongo_abelii
ENSMNEG00000032398	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSMNEG00000032398	SNRNP200	100	99.813	ENSPCOG00000024608	SNRNP200	100	99.813	Propithecus_coquereli
ENSMNEG00000032398	SNRNP200	96	99.660	ENSPVAG00000005860	SNRNP200	93	99.660	Pteropus_vampyrus
ENSMNEG00000032398	SNRNP200	99	85.995	ENSPNYG00000017476	snrnp200	99	85.901	Pundamilia_nyererei
ENSMNEG00000032398	SNRNP200	100	86.002	ENSPNAG00000010998	snrnp200	99	86.002	Pygocentrus_nattereri
ENSMNEG00000032398	SNRNP200	100	99.719	ENSRNOG00000012157	Snrnp200	100	99.719	Rattus_norvegicus
ENSMNEG00000032398	SNRNP200	100	99.906	ENSRBIG00000044690	-	100	99.906	Rhinopithecus_bieti
ENSMNEG00000032398	SNRNP200	100	99.906	ENSRROG00000037952	-	100	99.906	Rhinopithecus_roxellana
ENSMNEG00000032398	SNRNP200	100	99.860	ENSSBOG00000035471	SNRNP200	100	99.860	Saimiri_boliviensis_boliviensis
ENSMNEG00000032398	SNRNP200	97	98.791	ENSSHAG00000000758	SNRNP200	100	98.791	Sarcophilus_harrisii
ENSMNEG00000032398	SNRNP200	99	91.545	ENSSFOG00015018826	snrnp200	99	91.433	Scleropages_formosus
ENSMNEG00000032398	SNRNP200	99	90.371	ENSSMAG00000005463	snrnp200	99	90.262	Scophthalmus_maximus
ENSMNEG00000032398	SNRNP200	99	90.653	ENSSDUG00000021410	snrnp200	99	90.543	Seriola_dumerili
ENSMNEG00000032398	SNRNP200	99	90.606	ENSSLDG00000010884	snrnp200	99	90.496	Seriola_lalandi_dorsalis
ENSMNEG00000032398	SNRNP200	95	98.928	ENSSARG00000010728	SNRNP200	96	98.928	Sorex_araneus
ENSMNEG00000032398	SNRNP200	100	97.425	ENSSPUG00000003726	-	100	97.425	Sphenodon_punctatus
ENSMNEG00000032398	SNRNP200	99	90.700	ENSSPAG00000001842	snrnp200	99	90.590	Stegastes_partitus
ENSMNEG00000032398	SNRNP200	100	99.625	ENSSSCG00000008127	SNRNP200	100	99.625	Sus_scrofa
ENSMNEG00000032398	SNRNP200	99	87.975	ENSTGUG00000014475	-	100	87.975	Taeniopygia_guttata
ENSMNEG00000032398	SNRNP200	99	90.324	ENSTRUG00000001307	snrnp200	99	90.215	Takifugu_rubripes
ENSMNEG00000032398	SNRNP200	100	88.073	ENSTNIG00000004320	snrnp200	98	88.073	Tetraodon_nigroviridis
ENSMNEG00000032398	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSMNEG00000032398	SNRNP200	100	99.438	ENSTTRG00000004983	SNRNP200	100	99.438	Tursiops_truncatus
ENSMNEG00000032398	SNRNP200	95	90.578	ENSUAMG00000008395	-	95	92.926	Ursus_americanus
ENSMNEG00000032398	SNRNP200	100	99.813	ENSUMAG00000012385	SNRNP200	100	99.813	Ursus_maritimus
ENSMNEG00000032398	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSMNEG00000032398	SNRNP200	100	99.855	ENSVVUG00000026247	SNRNP200	100	99.855	Vulpes_vulpes
ENSMNEG00000032398	SNRNP200	100	94.250	ENSXETG00000001243	snrnp200	100	94.250	Xenopus_tropicalis
ENSMNEG00000032398	SNRNP200	97	90.364	ENSXMAG00000002058	snrnp200	98	90.364	Xiphophorus_maculatus