EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000032966 (Gene tree)
Gene ID: 105472733
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 61725 bases
Position: chrKQ008743.1:15319782-15381506
Accession: 105472733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000018326	RRM_1	PF00076.22	4.1e-09	1	1
ENSMNEP00000018316	RRM_1	PF00076.22	4.8e-09	1	1
ENSMNEP00000018284	RRM_1	PF00076.22	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000042561	SCAF4-203	3315	-	ENSMNEP00000018326	1104 (aa)	-	A0A2K6C3U0
ENSMNET00000042519	SCAF4-201	4519	XM_011726265	ENSMNEP00000018284	1154 (aa)	XP_011724567	A0A2K6C3Q7
ENSMNET00000042550	SCAF4-202	3396	-	ENSMNEP00000018316	1131 (aa)	-	A0A2K6C3S9

Gene Model

Click here to download ENSMNEG00000032966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000032966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000032966	SCAF4	100	98.097	ENSG00000156304	SCAF4	100	98.097	Homo_sapiens
ENSMNEG00000032966	SCAF4	78	52.620	ENSAPOG00000002946	scaf4a	55	59.091	Acanthochromis_polyacanthus
ENSMNEG00000032966	SCAF4	51	60.949	ENSAPOG00000019615	scaf4b	63	60.949	Acanthochromis_polyacanthus
ENSMNEG00000032966	SCAF4	74	94.046	ENSAMEG00000014987	SCAF4	96	93.803	Ailuropoda_melanoleuca
ENSMNEG00000032966	SCAF4	78	53.568	ENSAOCG00000000615	scaf4a	55	58.788	Amphiprion_ocellaris
ENSMNEG00000032966	SCAF4	78	53.348	ENSAPEG00000021229	scaf4a	55	58.636	Amphiprion_percula
ENSMNEG00000032966	SCAF4	99	74.978	ENSAPLG00000002509	SCAF4	58	85.103	Anas_platyrhynchos
ENSMNEG00000032966	SCAF4	95	69.838	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSMNEG00000032966	SCAF4	100	97.751	ENSANAG00000037494	SCAF4	100	97.751	Aotus_nancymaae
ENSMNEG00000032966	SCAF4	93	49.507	ENSAMXG00000008585	scaf4a	60	62.462	Astyanax_mexicanus
ENSMNEG00000032966	SCAF4	100	91.623	ENSBTAG00000018855	SCAF4	100	91.192	Bos_taurus
ENSMNEG00000032966	SCAF4	100	97.751	ENSCJAG00000008993	SCAF4	100	97.751	Callithrix_jacchus
ENSMNEG00000032966	SCAF4	99	92.502	ENSCAFG00000008863	SCAF4	99	92.764	Canis_familiaris
ENSMNEG00000032966	SCAF4	99	90.455	ENSCAFG00020026019	SCAF4	100	92.423	Canis_lupus_dingo
ENSMNEG00000032966	SCAF4	100	90.878	ENSCHIG00000008385	SCAF4	100	90.964	Capra_hircus
ENSMNEG00000032966	SCAF4	91	96.900	ENSTSYG00000011344	SCAF4	99	96.900	Carlito_syrichta
ENSMNEG00000032966	SCAF4	100	89.433	ENSCPOG00000012443	SCAF4	100	89.433	Cavia_porcellus
ENSMNEG00000032966	SCAF4	100	97.405	ENSCCAG00000033727	SCAF4	100	97.405	Cebus_capucinus
ENSMNEG00000032966	SCAF4	100	99.307	ENSCATG00000030379	SCAF4	100	99.307	Cercocebus_atys
ENSMNEG00000032966	SCAF4	99	91.688	ENSCLAG00000006298	SCAF4	100	91.515	Chinchilla_lanigera
ENSMNEG00000032966	SCAF4	100	98.617	ENSCSAG00000009438	SCAF4	100	98.617	Chlorocebus_sabaeus
ENSMNEG00000032966	SCAF4	100	98.529	ENSCANG00000029847	SCAF4	100	98.529	Colobus_angolensis_palliatus
ENSMNEG00000032966	SCAF4	99	82.164	ENSCGRG00001020821	Scaf4	100	82.237	Cricetulus_griseus_chok1gshd
ENSMNEG00000032966	SCAF4	99	81.856	ENSCGRG00000014360	Scaf4	99	86.094	Cricetulus_griseus_crigri
ENSMNEG00000032966	SCAF4	78	53.173	ENSCSEG00000019549	scaf4a	53	55.556	Cynoglossus_semilaevis
ENSMNEG00000032966	SCAF4	58	55.822	ENSCSEG00000012808	-	62	61.244	Cynoglossus_semilaevis
ENSMNEG00000032966	SCAF4	100	89.360	ENSDNOG00000019014	SCAF4	94	89.706	Dasypus_novemcinctus
ENSMNEG00000032966	SCAF4	91	93.333	ENSETEG00000000583	SCAF4	99	79.249	Echinops_telfairi
ENSMNEG00000032966	SCAF4	100	93.080	ENSEASG00005007756	SCAF4	100	93.080	Equus_asinus_asinus
ENSMNEG00000032966	SCAF4	100	92.561	ENSECAG00000014248	SCAF4	100	93.253	Equus_caballus
ENSMNEG00000032966	SCAF4	58	52.703	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSMNEG00000032966	SCAF4	100	91.731	ENSFCAG00000002228	SCAF4	99	92.108	Felis_catus
ENSMNEG00000032966	SCAF4	99	88.281	ENSFDAG00000017780	SCAF4	100	88.879	Fukomys_damarensis
ENSMNEG00000032966	SCAF4	100	76.667	ENSGALG00000033965	SCAF4	58	84.469	Gallus_gallus
ENSMNEG00000032966	SCAF4	91	95.317	ENSGGOG00000015557	SCAF4	100	98.628	Gorilla_gorilla
ENSMNEG00000032966	SCAF4	100	89.735	ENSHGLG00000010582	SCAF4	100	90.847	Heterocephalus_glaber_female
ENSMNEG00000032966	SCAF4	99	89.610	ENSHGLG00100009441	SCAF4	100	90.736	Heterocephalus_glaber_male
ENSMNEG00000032966	SCAF4	68	49.770	ENSIPUG00000011285	scaf4	63	62.707	Ictalurus_punctatus
ENSMNEG00000032966	SCAF4	99	86.852	ENSSTOG00000004450	SCAF4	100	86.941	Ictidomys_tridecemlineatus
ENSMNEG00000032966	SCAF4	99	89.086	ENSJJAG00000019447	Scaf4	99	89.225	Jaculus_jaculus
ENSMNEG00000032966	SCAF4	97	60.577	ENSLACG00000013913	SCAF4	59	69.401	Latimeria_chalumnae
ENSMNEG00000032966	SCAF4	95	57.477	ENSLOCG00000009162	scaf4a	59	67.211	Lepisosteus_oculatus
ENSMNEG00000032966	SCAF4	99	93.544	ENSLAFG00000010710	SCAF4	100	91.138	Loxodonta_africana
ENSMNEG00000032966	SCAF4	100	99.567	ENSMFAG00000037668	SCAF4	100	99.567	Macaca_fascicularis
ENSMNEG00000032966	SCAF4	100	99.480	ENSMMUG00000001712	SCAF4	100	99.480	Macaca_mulatta
ENSMNEG00000032966	SCAF4	99	99.476	ENSMLEG00000039674	SCAF4	100	99.476	Mandrillus_leucophaeus
ENSMNEG00000032966	SCAF4	99	75.659	ENSMGAG00000014515	SCAF4	58	84.628	Meleagris_gallopavo
ENSMNEG00000032966	SCAF4	99	88.112	ENSMAUG00000013307	Scaf4	100	87.762	Mesocricetus_auratus
ENSMNEG00000032966	SCAF4	100	96.107	ENSMICG00000005256	SCAF4	100	96.107	Microcebus_murinus
ENSMNEG00000032966	SCAF4	100	84.265	ENSMOCG00000012087	Scaf4	95	90.897	Microtus_ochrogaster
ENSMNEG00000032966	SCAF4	100	84.211	ENSMODG00000021040	SCAF4	99	84.492	Monodelphis_domestica
ENSMNEG00000032966	SCAF4	100	83.591	MGP_CAROLIEiJ_G0020944	Scaf4	100	86.154	Mus_caroli
ENSMNEG00000032966	SCAF4	100	82.616	ENSMUSG00000022983	Scaf4	95	89.514	Mus_musculus
ENSMNEG00000032966	SCAF4	100	82.443	MGP_PahariEiJ_G0016649	Scaf4	100	85.641	Mus_pahari
ENSMNEG00000032966	SCAF4	100	83.850	MGP_SPRETEiJ_G0021850	Scaf4	100	85.850	Mus_spretus
ENSMNEG00000032966	SCAF4	100	92.162	ENSMPUG00000001078	SCAF4	100	92.334	Mustela_putorius_furo
ENSMNEG00000032966	SCAF4	99	76.898	ENSMLUG00000011472	SCAF4	79	83.315	Myotis_lucifugus
ENSMNEG00000032966	SCAF4	99	89.991	ENSNGAG00000005214	Scaf4	99	90.278	Nannospalax_galili
ENSMNEG00000032966	SCAF4	100	97.924	ENSNLEG00000003569	SCAF4	100	97.924	Nomascus_leucogenys
ENSMNEG00000032966	SCAF4	82	95.652	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSMNEG00000032966	SCAF4	100	88.295	ENSODEG00000002718	SCAF4	100	88.465	Octodon_degus
ENSMNEG00000032966	SCAF4	70	59.115	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSMNEG00000032966	SCAF4	100	88.630	ENSOCUG00000008336	SCAF4	100	88.803	Oryctolagus_cuniculus
ENSMNEG00000032966	SCAF4	64	50.162	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSMNEG00000032966	SCAF4	53	41.294	ENSORLG00020011857	scaf4a	52	59.311	Oryzias_latipes_hni
ENSMNEG00000032966	SCAF4	52	41.287	ENSORLG00015017880	scaf4a	52	61.346	Oryzias_latipes_hsok
ENSMNEG00000032966	SCAF4	99	93.852	ENSOGAG00000014653	SCAF4	94	94.638	Otolemur_garnettii
ENSMNEG00000032966	SCAF4	99	90.278	ENSOARG00000013894	SCAF4	99	90.172	Ovis_aries
ENSMNEG00000032966	SCAF4	100	98.097	ENSPPAG00000028535	SCAF4	100	98.097	Pan_paniscus
ENSMNEG00000032966	SCAF4	99	92.211	ENSPPRG00000000635	SCAF4	99	92.183	Panthera_pardus
ENSMNEG00000032966	SCAF4	99	90.619	ENSPTIG00000021578	SCAF4	99	88.673	Panthera_tigris_altaica
ENSMNEG00000032966	SCAF4	100	98.097	ENSPTRG00000013848	SCAF4	100	98.097	Pan_troglodytes
ENSMNEG00000032966	SCAF4	100	99.653	ENSPANG00000017332	SCAF4	100	99.653	Papio_anubis
ENSMNEG00000032966	SCAF4	64	63.984	ENSPKIG00000022408	scaf4a	90	66.517	Paramormyrops_kingsleyae
ENSMNEG00000032966	SCAF4	99	77.305	ENSPSIG00000014242	SCAF4	73	84.211	Pelodiscus_sinensis
ENSMNEG00000032966	SCAF4	60	88.807	ENSPCIG00000028183	SCAF4	91	82.290	Phascolarctos_cinereus
ENSMNEG00000032966	SCAF4	52	55.426	ENSPLAG00000004403	-	58	64.286	Poecilia_latipinna
ENSMNEG00000032966	SCAF4	100	98.270	ENSPPYG00000011355	SCAF4	100	98.270	Pongo_abelii
ENSMNEG00000032966	SCAF4	100	95.675	ENSPCOG00000018710	SCAF4	100	95.415	Propithecus_coquereli
ENSMNEG00000032966	SCAF4	100	91.609	ENSPVAG00000005220	SCAF4	100	91.869	Pteropus_vampyrus
ENSMNEG00000032966	SCAF4	75	57.480	ENSPNAG00000016892	scaf4a	60	63.323	Pygocentrus_nattereri
ENSMNEG00000032966	SCAF4	98	85.600	ENSRNOG00000002104	Scaf4	98	85.897	Rattus_norvegicus
ENSMNEG00000032966	SCAF4	100	96.485	ENSRBIG00000040007	SCAF4	100	96.485	Rhinopithecus_bieti
ENSMNEG00000032966	SCAF4	100	98.616	ENSRROG00000029488	SCAF4	100	98.616	Rhinopithecus_roxellana
ENSMNEG00000032966	SCAF4	99	85.333	ENSSHAG00000001581	SCAF4	99	84.018	Sarcophilus_harrisii
ENSMNEG00000032966	SCAF4	88	47.941	ENSSFOG00015006338	scaf4a	54	59.847	Scleropages_formosus
ENSMNEG00000032966	SCAF4	65	56.690	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSMNEG00000032966	SCAF4	79	53.568	ENSSMAG00000017901	scaf4a	53	53.461	Scophthalmus_maximus
ENSMNEG00000032966	SCAF4	57	61.290	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSMNEG00000032966	SCAF4	57	61.290	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSMNEG00000032966	SCAF4	100	89.446	ENSSARG00000009994	SCAF4	100	89.360	Sorex_araneus
ENSMNEG00000032966	SCAF4	100	90.300	ENSSSCG00000021023	SCAF4	100	90.129	Sus_scrofa
ENSMNEG00000032966	SCAF4	74	72.246	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSMNEG00000032966	SCAF4	50	58.451	ENSTRUG00000009536	-	65	57.818	Takifugu_rubripes
ENSMNEG00000032966	SCAF4	99	91.623	ENSTTRG00000010963	SCAF4	100	91.187	Tursiops_truncatus
ENSMNEG00000032966	SCAF4	100	90.398	ENSUAMG00000008860	SCAF4	100	90.484	Ursus_americanus
ENSMNEG00000032966	SCAF4	99	93.125	ENSUMAG00000016962	SCAF4	100	93.125	Ursus_maritimus
ENSMNEG00000032966	SCAF4	99	92.557	ENSVVUG00000002953	SCAF4	100	92.820	Vulpes_vulpes
ENSMNEG00000032966	SCAF4	99	56.209	ENSXETG00000007351	scaf4	75	66.618	Xenopus_tropicalis