EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000034217 (Gene tree)
Gene ID: 105469996
Gene Symbol: XRN1
Alias: SEP1
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 159268 bases
Position: chrKQ007845.1:9554933-9714200
Accession: 105469996
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000020879	XRN_N	PF03159.18	6.3e-96	1	1
ENSMNEP00000020874	XRN_N	PF03159.18	6.4e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000045128	XRN1-202	10076	XM_011721682	ENSMNEP00000020879	1694 (aa)	XP_011719984	A0A2K6CB41
ENSMNET00000045123	XRN1-201	10115	XM_011721678	ENSMNEP00000020874	1707 (aa)	XP_011719980	A0A2K6CB35

Gene Model

Click here to download ENSMNEG00000034217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000034217's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000034217	XRN1	100	97.462	ENSG00000114127	XRN1	100	100.000	Homo_sapiens
ENSMNEG00000034217	XRN1	95	72.801	ENSAPOG00000000622	xrn1	93	76.546	Acanthochromis_polyacanthus
ENSMNEG00000034217	XRN1	100	91.873	ENSAMEG00000012538	XRN1	100	91.873	Ailuropoda_melanoleuca
ENSMNEG00000034217	XRN1	95	72.417	ENSACIG00000001057	xrn1	94	72.579	Amphilophus_citrinellus
ENSMNEG00000034217	XRN1	100	61.003	ENSAOCG00000014097	xrn1	95	69.277	Amphiprion_ocellaris
ENSMNEG00000034217	XRN1	100	60.598	ENSAPEG00000006620	xrn1	98	63.024	Amphiprion_percula
ENSMNEG00000034217	XRN1	94	70.644	ENSATEG00000009752	xrn1	97	71.281	Anabas_testudineus
ENSMNEG00000034217	XRN1	99	76.190	ENSAPLG00000004905	XRN1	100	76.190	Anas_platyrhynchos
ENSMNEG00000034217	XRN1	100	72.579	ENSACAG00000004985	XRN1	100	72.579	Anolis_carolinensis
ENSMNEG00000034217	XRN1	100	96.694	ENSANAG00000029013	XRN1	100	96.694	Aotus_nancymaae
ENSMNEG00000034217	XRN1	100	60.433	ENSACLG00000004806	xrn1	96	62.173	Astatotilapia_calliptera
ENSMNEG00000034217	XRN1	99	60.722	ENSAMXG00000019370	xrn1	96	93.269	Astyanax_mexicanus
ENSMNEG00000034217	XRN1	100	92.267	ENSBTAG00000011524	XRN1	100	92.091	Bos_taurus
ENSMNEG00000034217	XRN1	71	39.392	WBGene00012730	xrn-1	80	39.408	Caenorhabditis_elegans
ENSMNEG00000034217	XRN1	100	96.871	ENSCJAG00000001872	XRN1	100	96.871	Callithrix_jacchus
ENSMNEG00000034217	XRN1	100	93.322	ENSCAFG00000007783	XRN1	100	93.322	Canis_familiaris
ENSMNEG00000034217	XRN1	100	92.201	ENSCAFG00020009120	XRN1	99	94.286	Canis_lupus_dingo
ENSMNEG00000034217	XRN1	99	90.283	ENSCHIG00000019192	XRN1	99	90.110	Capra_hircus
ENSMNEG00000034217	XRN1	100	94.218	ENSTSYG00000002705	XRN1	100	94.218	Carlito_syrichta
ENSMNEG00000034217	XRN1	55	76.285	ENSCAPG00000004604	-	99	76.285	Cavia_aperea
ENSMNEG00000034217	XRN1	100	97.344	ENSCCAG00000034800	XRN1	99	98.732	Cebus_capucinus
ENSMNEG00000034217	XRN1	100	99.590	ENSCATG00000041794	XRN1	100	99.590	Cercocebus_atys
ENSMNEG00000034217	XRN1	100	87.998	ENSCLAG00000001451	XRN1	99	95.880	Chinchilla_lanigera
ENSMNEG00000034217	XRN1	100	99.414	ENSCSAG00000011265	XRN1	100	99.414	Chlorocebus_sabaeus
ENSMNEG00000034217	XRN1	58	98.701	ENSCHOG00000013961	-	59	98.701	Choloepus_hoffmanni
ENSMNEG00000034217	XRN1	71	45.093	ENSCSAVG00000008584	-	98	44.669	Ciona_savignyi
ENSMNEG00000034217	XRN1	100	99.115	ENSCANG00000037495	XRN1	100	99.115	Colobus_angolensis_palliatus
ENSMNEG00000034217	XRN1	100	87.926	ENSCGRG00001019411	Xrn1	99	96.038	Cricetulus_griseus_chok1gshd
ENSMNEG00000034217	XRN1	100	87.926	ENSCGRG00000012464	Xrn1	99	96.038	Cricetulus_griseus_crigri
ENSMNEG00000034217	XRN1	100	55.964	ENSCSEG00000021285	xrn1	94	95.192	Cynoglossus_semilaevis
ENSMNEG00000034217	XRN1	67	68.805	ENSCVAG00000013089	xrn1	99	71.869	Cyprinodon_variegatus
ENSMNEG00000034217	XRN1	99	62.993	ENSDARG00000091652	xrn1	98	79.747	Danio_rerio
ENSMNEG00000034217	XRN1	100	87.037	ENSDORG00000013833	Xrn1	100	86.979	Dipodomys_ordii
ENSMNEG00000034217	XRN1	75	39.860	FBgn0020261	pcm	76	39.768	Drosophila_melanogaster
ENSMNEG00000034217	XRN1	86	100.000	ENSETEG00000003978	XRN1	88	99.194	Echinops_telfairi
ENSMNEG00000034217	XRN1	100	93.029	ENSEASG00005002687	XRN1	99	96.197	Equus_asinus_asinus
ENSMNEG00000034217	XRN1	100	93.029	ENSECAG00000008301	XRN1	100	93.029	Equus_caballus
ENSMNEG00000034217	XRN1	92	83.187	ENSEEUG00000011323	XRN1	92	83.187	Erinaceus_europaeus
ENSMNEG00000034217	XRN1	100	61.753	ENSELUG00000000169	xrn1	94	63.735	Esox_lucius
ENSMNEG00000034217	XRN1	100	89.578	ENSFCAG00000027589	XRN1	99	95.824	Felis_catus
ENSMNEG00000034217	XRN1	100	74.733	ENSFALG00000007021	XRN1	100	74.789	Ficedula_albicollis
ENSMNEG00000034217	XRN1	100	88.921	ENSFDAG00000020494	XRN1	99	95.404	Fukomys_damarensis
ENSMNEG00000034217	XRN1	84	68.368	ENSGMOG00000006396	xrn1	80	68.368	Gadus_morhua
ENSMNEG00000034217	XRN1	100	75.014	ENSGALG00000002706	XRN1	100	75.014	Gallus_gallus
ENSMNEG00000034217	XRN1	100	59.852	ENSGACG00000014328	xrn1	96	61.452	Gasterosteus_aculeatus
ENSMNEG00000034217	XRN1	95	78.180	ENSGAGG00000017535	XRN1	99	78.180	Gopherus_agassizii
ENSMNEG00000034217	XRN1	100	97.657	ENSGGOG00000008047	XRN1	100	97.657	Gorilla_gorilla
ENSMNEG00000034217	XRN1	100	60.615	ENSHBUG00000005908	xrn1	98	72.784	Haplochromis_burtoni
ENSMNEG00000034217	XRN1	100	90.138	ENSHGLG00000014476	XRN1	99	96.355	Heterocephalus_glaber_female
ENSMNEG00000034217	XRN1	100	90.138	ENSHGLG00100015130	XRN1	99	96.355	Heterocephalus_glaber_male
ENSMNEG00000034217	XRN1	97	70.253	ENSHCOG00000014062	xrn1	96	70.253	Hippocampus_comes
ENSMNEG00000034217	XRN1	99	62.701	ENSIPUG00000015229	xrn1	96	64.745	Ictalurus_punctatus
ENSMNEG00000034217	XRN1	100	91.686	ENSSTOG00000013552	XRN1	99	97.464	Ictidomys_tridecemlineatus
ENSMNEG00000034217	XRN1	98	86.944	ENSJJAG00000010863	Xrn1	99	93.871	Jaculus_jaculus
ENSMNEG00000034217	XRN1	94	61.379	ENSKMAG00000021356	xrn1	94	76.160	Kryptolebias_marmoratus
ENSMNEG00000034217	XRN1	100	60.364	ENSLBEG00000018656	xrn1	97	96.117	Labrus_bergylta
ENSMNEG00000034217	XRN1	100	69.932	ENSLACG00000009020	XRN1	97	71.032	Latimeria_chalumnae
ENSMNEG00000034217	XRN1	100	65.977	ENSLOCG00000007944	xrn1	98	66.139	Lepisosteus_oculatus
ENSMNEG00000034217	XRN1	63	96.165	ENSLAFG00000015426	XRN1	100	96.165	Loxodonta_africana
ENSMNEG00000034217	XRN1	100	99.707	ENSMFAG00000032599	XRN1	100	99.707	Macaca_fascicularis
ENSMNEG00000034217	XRN1	100	99.707	ENSMMUG00000014038	XRN1	100	99.707	Macaca_mulatta
ENSMNEG00000034217	XRN1	94	71.429	ENSMAMG00000013219	xrn1	94	76.543	Mastacembelus_armatus
ENSMNEG00000034217	XRN1	100	60.319	ENSMZEG00005015099	xrn1	96	62.055	Maylandia_zebra
ENSMNEG00000034217	XRN1	99	74.942	ENSMGAG00000006333	XRN1	100	74.942	Meleagris_gallopavo
ENSMNEG00000034217	XRN1	100	94.405	ENSMICG00000048948	XRN1	96	100.000	Microcebus_murinus
ENSMNEG00000034217	XRN1	58	94.929	ENSMOCG00000008665	Xrn1	99	94.929	Microtus_ochrogaster
ENSMNEG00000034217	XRN1	100	82.439	ENSMODG00000021236	XRN1	100	82.147	Monodelphis_domestica
ENSMNEG00000034217	XRN1	100	57.949	ENSMALG00000004098	xrn1	100	57.849	Monopterus_albus
ENSMNEG00000034217	XRN1	96	95.103	MGP_CAROLIEiJ_G0032535	Xrn1	100	100.000	Mus_caroli
ENSMNEG00000034217	XRN1	100	86.828	ENSMUSG00000032410	Xrn1	100	100.000	Mus_musculus
ENSMNEG00000034217	XRN1	100	86.540	MGP_PahariEiJ_G0015404	Xrn1	100	100.000	Mus_pahari
ENSMNEG00000034217	XRN1	100	86.771	MGP_SPRETEiJ_G0033678	Xrn1	100	100.000	Mus_spretus
ENSMNEG00000034217	XRN1	100	93.556	ENSMPUG00000012040	XRN1	100	93.556	Mustela_putorius_furo
ENSMNEG00000034217	XRN1	100	89.492	ENSMLUG00000016885	XRN1	100	89.376	Myotis_lucifugus
ENSMNEG00000034217	XRN1	58	91.442	ENSNGAG00000023964	Xrn1	99	91.733	Nannospalax_galili
ENSMNEG00000034217	XRN1	100	97.993	ENSNLEG00000004726	XRN1	100	97.993	Nomascus_leucogenys
ENSMNEG00000034217	XRN1	77	98.969	ENSMEUG00000014473	-	80	99.029	Notamacropus_eugenii
ENSMNEG00000034217	XRN1	79	84.320	ENSOPRG00000007337	-	78	84.320	Ochotona_princeps
ENSMNEG00000034217	XRN1	100	61.552	ENSONIG00000016673	xrn1	99	64.793	Oreochromis_niloticus
ENSMNEG00000034217	XRN1	92	77.953	ENSOANG00000006735	XRN1	100	77.827	Ornithorhynchus_anatinus
ENSMNEG00000034217	XRN1	100	90.258	ENSOCUG00000001861	XRN1	100	90.086	Oryctolagus_cuniculus
ENSMNEG00000034217	XRN1	100	60.850	ENSORLG00000013005	xrn1	100	60.171	Oryzias_latipes
ENSMNEG00000034217	XRN1	100	61.073	ENSORLG00020005559	xrn1	100	61.348	Oryzias_latipes_hni
ENSMNEG00000034217	XRN1	100	61.080	ENSORLG00015022523	xrn1	89	72.298	Oryzias_latipes_hsok
ENSMNEG00000034217	XRN1	93	72.498	ENSOMEG00000015397	xrn1	99	72.742	Oryzias_melastigma
ENSMNEG00000034217	XRN1	100	91.218	ENSOGAG00000000170	XRN1	100	91.218	Otolemur_garnettii
ENSMNEG00000034217	XRN1	99	92.786	ENSOARG00000006343	XRN1	99	92.610	Ovis_aries
ENSMNEG00000034217	XRN1	100	97.598	ENSPPAG00000010180	XRN1	100	97.598	Pan_paniscus
ENSMNEG00000034217	XRN1	100	93.687	ENSPPRG00000007125	XRN1	100	93.687	Panthera_pardus
ENSMNEG00000034217	XRN1	100	93.746	ENSPTIG00000021081	XRN1	100	93.746	Panthera_tigris_altaica
ENSMNEG00000034217	XRN1	100	97.657	ENSPTRG00000015482	XRN1	100	97.657	Pan_troglodytes
ENSMNEG00000034217	XRN1	100	99.590	ENSPANG00000010638	XRN1	100	99.590	Papio_anubis
ENSMNEG00000034217	XRN1	100	76.927	ENSPSIG00000018050	XRN1	100	77.042	Pelodiscus_sinensis
ENSMNEG00000034217	XRN1	57	77.237	ENSPMGG00000002648	xrn1	98	78.336	Periophthalmus_magnuspinnatus
ENSMNEG00000034217	XRN1	58	95.721	ENSPEMG00000020610	Xrn1	99	95.721	Peromyscus_maniculatus_bairdii
ENSMNEG00000034217	XRN1	65	50.970	ENSPMAG00000002975	xrn1	91	78.736	Petromyzon_marinus
ENSMNEG00000034217	XRN1	100	81.643	ENSPCIG00000028735	XRN1	99	89.929	Phascolarctos_cinereus
ENSMNEG00000034217	XRN1	91	64.638	ENSPFOG00000013932	xrn1	99	65.019	Poecilia_formosa
ENSMNEG00000034217	XRN1	91	63.729	ENSPLAG00000021653	xrn1	99	64.231	Poecilia_latipinna
ENSMNEG00000034217	XRN1	89	64.230	ENSPMEG00000003076	xrn1	95	64.744	Poecilia_mexicana
ENSMNEG00000034217	XRN1	100	60.706	ENSPREG00000021147	xrn1	100	60.485	Poecilia_reticulata
ENSMNEG00000034217	XRN1	100	97.657	ENSPPYG00000014172	XRN1	100	97.657	Pongo_abelii
ENSMNEG00000034217	XRN1	90	81.801	ENSPCAG00000005638	XRN1	100	81.801	Procavia_capensis
ENSMNEG00000034217	XRN1	100	94.867	ENSPCOG00000013089	XRN1	99	97.264	Propithecus_coquereli
ENSMNEG00000034217	XRN1	96	92.461	ENSPVAG00000016265	XRN1	96	92.461	Pteropus_vampyrus
ENSMNEG00000034217	XRN1	96	71.203	ENSPNYG00000010570	xrn1	94	71.101	Pundamilia_nyererei
ENSMNEG00000034217	XRN1	99	60.541	ENSPNAG00000023531	xrn1	96	61.928	Pygocentrus_nattereri
ENSMNEG00000034217	XRN1	100	87.522	ENSRNOG00000042951	Xrn1	100	87.406	Rattus_norvegicus
ENSMNEG00000034217	XRN1	100	98.477	ENSRBIG00000041227	XRN1	100	98.477	Rhinopithecus_bieti
ENSMNEG00000034217	XRN1	67	54.496	YGL173C	XRN1	81	34.513	Saccharomyces_cerevisiae
ENSMNEG00000034217	XRN1	100	96.753	ENSSBOG00000029561	XRN1	100	96.753	Saimiri_boliviensis_boliviensis
ENSMNEG00000034217	XRN1	99	81.893	ENSSHAG00000016207	XRN1	100	81.598	Sarcophilus_harrisii
ENSMNEG00000034217	XRN1	100	61.396	ENSSFOG00015024211	xrn1	97	63.079	Scleropages_formosus
ENSMNEG00000034217	XRN1	94	72.617	ENSSMAG00000016534	xrn1	95	72.617	Scophthalmus_maximus
ENSMNEG00000034217	XRN1	90	72.335	ENSSDUG00000010306	xrn1	91	72.335	Seriola_dumerili
ENSMNEG00000034217	XRN1	95	71.895	ENSSLDG00000021543	xrn1	97	71.895	Seriola_lalandi_dorsalis
ENSMNEG00000034217	XRN1	68	85.331	ENSSARG00000007741	-	83	85.331	Sorex_araneus
ENSMNEG00000034217	XRN1	100	77.017	ENSTGUG00000008498	XRN1	100	77.075	Taeniopygia_guttata
ENSMNEG00000034217	XRN1	100	58.576	ENSTRUG00000004895	xrn1	96	75.157	Takifugu_rubripes
ENSMNEG00000034217	XRN1	96	68.367	ENSTNIG00000017615	xrn1	96	60.520	Tetraodon_nigroviridis
ENSMNEG00000034217	XRN1	84	97.574	ENSTBEG00000003256	XRN1	89	87.560	Tupaia_belangeri
ENSMNEG00000034217	XRN1	100	89.104	ENSTTRG00000012914	XRN1	100	88.869	Tursiops_truncatus
ENSMNEG00000034217	XRN1	100	92.681	ENSUAMG00000001608	XRN1	99	94.286	Ursus_americanus
ENSMNEG00000034217	XRN1	100	94.555	ENSUMAG00000013625	XRN1	100	94.555	Ursus_maritimus
ENSMNEG00000034217	XRN1	100	90.685	ENSVPAG00000004690	XRN1	100	90.685	Vicugna_pacos
ENSMNEG00000034217	XRN1	100	94.200	ENSVVUG00000024461	XRN1	99	96.989	Vulpes_vulpes
ENSMNEG00000034217	XRN1	100	69.240	ENSXETG00000000619	xrn1	97	88.710	Xenopus_tropicalis
ENSMNEG00000034217	XRN1	100	61.185	ENSXCOG00000007917	xrn1	95	63.084	Xiphophorus_couchianus
ENSMNEG00000034217	XRN1	92	71.801	ENSXMAG00000018320	xrn1	98	71.883	Xiphophorus_maculatus