EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000034683 (Gene tree)
Gene ID: 105470610
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 17342 bases
Position: chrKQ008039.1:7101041-7118382
Accession: 105470610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000021985	RRM_1	PF00076.22	2e-18	1	1
ENSMNEP00000021970	RRM_1	PF00076.22	6.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000046222	RBM38-201	2368	XM_011722766	ENSMNEP00000021970	237 (aa)	XP_011721068	A0A2K6CE85
ENSMNET00000046237	RBM38-202	366	-	ENSMNEP00000021985	121 (aa)	-	A0A2K6CE99

Gene Model

Click here to download ENSMNEG00000034683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000034683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000034683	RBM38	89	40.260	ENSMNEG00000045275	MSI2	66	40.260
ENSMNEG00000034683	RBM38	62	39.474	ENSMNEG00000033588	-	79	41.935
ENSMNEG00000034683	RBM38	86	44.262	ENSMNEG00000039618	-	69	44.262
ENSMNEG00000034683	RBM38	81	91.837	ENSMNEG00000040710	RBM24	100	64.961
ENSMNEG00000034683	RBM38	63	42.373	ENSMNEG00000040034	MSI1	80	36.842
ENSMNEG00000034683	RBM38	71	34.177	ENSMNEG00000044677	HNRNPAB	54	34.177
ENSMNEG00000034683	RBM38	74	42.857	ENSMNEG00000029148	HNRNPA2B1	83	40.000
ENSMNEG00000034683	RBM38	62	42.105	ENSMNEG00000042115	-	69	43.548
ENSMNEG00000034683	RBM38	65	47.826	ENSMNEG00000042504	-	58	47.826
ENSMNEG00000034683	RBM38	64	44.118	ENSMNEG00000042992	HNRNPA1	55	44.118
ENSMNEG00000034683	RBM38	60	34.247	ENSMNEG00000027176	-	88	34.247
ENSMNEG00000034683	RBM38	97	35.294	ENSMNEG00000040014	DAZAP1	50	34.862
ENSMNEG00000034683	RBM38	68	39.759	ENSMNEG00000000984	-	55	38.636
ENSMNEG00000034683	RBM38	70	31.765	ENSMNEG00000028921	SLIRP	78	30.682
ENSMNEG00000034683	RBM38	67	38.667	ENSMNEG00000015863	HNRNPA0	51	38.667
ENSMNEG00000034683	RBM38	89	36.697	ENSMNEG00000033116	CIRBP	50	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000034683	RBM38	100	99.174	ENSG00000132819	RBM38	100	99.174	Homo_sapiens
ENSMNEG00000034683	RBM38	81	85.859	ENSAPOG00000003301	rbm38	91	59.483	Acanthochromis_polyacanthus
ENSMNEG00000034683	RBM38	82	90.099	ENSAPOG00000009939	-	94	69.091	Acanthochromis_polyacanthus
ENSMNEG00000034683	RBM38	81	85.859	ENSACIG00000000010	rbm38	91	57.940	Amphilophus_citrinellus
ENSMNEG00000034683	RBM38	81	92.929	ENSACIG00000012502	-	100	88.889	Amphilophus_citrinellus
ENSMNEG00000034683	RBM38	100	79.675	ENSAOCG00000012559	RBM38	99	65.289	Amphiprion_ocellaris
ENSMNEG00000034683	RBM38	81	85.859	ENSAOCG00000013497	-	91	59.483	Amphiprion_ocellaris
ENSMNEG00000034683	RBM38	99	76.423	ENSAPEG00000013137	rbm38	99	60.331	Amphiprion_percula
ENSMNEG00000034683	RBM38	82	90.099	ENSAPEG00000023581	-	95	65.401	Amphiprion_percula
ENSMNEG00000034683	RBM38	81	84.848	ENSATEG00000016366	rbm38	94	61.607	Anabas_testudineus
ENSMNEG00000034683	RBM38	78	93.617	ENSATEG00000016710	-	92	66.379	Anabas_testudineus
ENSMNEG00000034683	RBM38	82	91.919	ENSACAG00000016238	RBM38	97	74.153	Anolis_carolinensis
ENSMNEG00000034683	RBM38	100	100.000	ENSANAG00000031959	RBM38	100	100.000	Aotus_nancymaae
ENSMNEG00000034683	RBM38	78	94.681	ENSACLG00000019514	-	92	66.810	Astatotilapia_calliptera
ENSMNEG00000034683	RBM38	82	91.089	ENSAMXG00000015601	-	95	67.391	Astyanax_mexicanus
ENSMNEG00000034683	RBM38	78	86.170	ENSAMXG00000038120	rbm38	81	61.421	Astyanax_mexicanus
ENSMNEG00000034683	RBM38	100	98.347	ENSBTAG00000008105	RBM38	100	95.816	Bos_taurus
ENSMNEG00000034683	RBM38	74	85.393	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSMNEG00000034683	RBM38	100	100.000	ENSCJAG00000019139	RBM38	100	100.000	Callithrix_jacchus
ENSMNEG00000034683	RBM38	100	99.174	ENSCAFG00020021943	RBM38	100	95.397	Canis_lupus_dingo
ENSMNEG00000034683	RBM38	100	97.521	ENSCHIG00000002609	RBM38	100	94.561	Capra_hircus
ENSMNEG00000034683	RBM38	100	100.000	ENSCPOG00000012781	RBM38	100	95.816	Cavia_porcellus
ENSMNEG00000034683	RBM38	100	100.000	ENSCCAG00000036872	RBM38	100	100.000	Cebus_capucinus
ENSMNEG00000034683	RBM38	100	100.000	ENSCATG00000032133	RBM38	100	100.000	Cercocebus_atys
ENSMNEG00000034683	RBM38	93	100.000	ENSCLAG00000005906	RBM38	100	95.652	Chinchilla_lanigera
ENSMNEG00000034683	RBM38	100	100.000	ENSCSAG00000015503	RBM38	100	100.000	Chlorocebus_sabaeus
ENSMNEG00000034683	RBM38	81	94.898	ENSCPBG00000024059	RBM38	100	81.193	Chrysemys_picta_bellii
ENSMNEG00000034683	RBM38	80	84.536	ENSCSAVG00000001132	-	76	56.098	Ciona_savignyi
ENSMNEG00000034683	RBM38	99	80.833	ENSCANG00000030105	-	89	77.119	Colobus_angolensis_palliatus
ENSMNEG00000034683	RBM38	100	95.868	ENSCGRG00001012928	Rbm38	100	92.050	Cricetulus_griseus_chok1gshd
ENSMNEG00000034683	RBM38	79	82.292	ENSCSEG00000020943	rbm38	60	61.957	Cynoglossus_semilaevis
ENSMNEG00000034683	RBM38	78	93.617	ENSCSEG00000004701	-	93	70.968	Cynoglossus_semilaevis
ENSMNEG00000034683	RBM38	76	91.304	ENSCVAG00000015952	rbm38	91	59.227	Cyprinodon_variegatus
ENSMNEG00000034683	RBM38	78	95.745	ENSCVAG00000005472	-	92	66.379	Cyprinodon_variegatus
ENSMNEG00000034683	RBM38	78	92.553	ENSDARG00000058818	rbm38	92	64.126	Danio_rerio
ENSMNEG00000034683	RBM38	90	90.654	ENSDNOG00000032004	RBM38	100	90.654	Dasypus_novemcinctus
ENSMNEG00000034683	RBM38	88	85.047	ENSEBUG00000015164	rbm38	66	85.047	Eptatretus_burgeri
ENSMNEG00000034683	RBM38	100	98.347	ENSECAG00000007700	RBM38	100	95.397	Equus_caballus
ENSMNEG00000034683	RBM38	100	95.041	ENSEEUG00000013489	RBM38	100	94.167	Erinaceus_europaeus
ENSMNEG00000034683	RBM38	81	89.000	ENSELUG00000005849	-	95	66.667	Esox_lucius
ENSMNEG00000034683	RBM38	81	88.889	ENSELUG00000000585	-	84	66.495	Esox_lucius
ENSMNEG00000034683	RBM38	100	98.347	ENSFCAG00000042916	RBM38	100	98.347	Felis_catus
ENSMNEG00000034683	RBM38	85	93.204	ENSFALG00000010805	RBM38	93	83.799	Ficedula_albicollis
ENSMNEG00000034683	RBM38	77	91.398	ENSFHEG00000017748	rbm38	91	57.940	Fundulus_heteroclitus
ENSMNEG00000034683	RBM38	78	95.745	ENSFHEG00000006160	-	92	72.430	Fundulus_heteroclitus
ENSMNEG00000034683	RBM38	78	93.617	ENSGMOG00000016655	-	96	74.725	Gadus_morhua
ENSMNEG00000034683	RBM38	81	94.898	ENSGALG00000026081	RBM38	100	79.358	Gallus_gallus
ENSMNEG00000034683	RBM38	80	85.714	ENSGACG00000015224	rbm38	98	63.333	Gasterosteus_aculeatus
ENSMNEG00000034683	RBM38	81	88.000	ENSGACG00000009873	-	100	66.816	Gasterosteus_aculeatus
ENSMNEG00000034683	RBM38	81	94.898	ENSGAGG00000001187	RBM38	100	81.651	Gopherus_agassizii
ENSMNEG00000034683	RBM38	81	84.848	ENSHBUG00000012058	rbm38	98	59.336	Haplochromis_burtoni
ENSMNEG00000034683	RBM38	78	94.681	ENSHBUG00000011778	-	92	70.776	Haplochromis_burtoni
ENSMNEG00000034683	RBM38	100	98.347	ENSHGLG00000015077	RBM38	100	92.050	Heterocephalus_glaber_female
ENSMNEG00000034683	RBM38	82	89.109	ENSHCOG00000005622	-	54	73.438	Hippocampus_comes
ENSMNEG00000034683	RBM38	74	85.556	ENSHCOG00000019040	rbm38	70	64.072	Hippocampus_comes
ENSMNEG00000034683	RBM38	82	91.089	ENSIPUG00000019349	-	95	65.086	Ictalurus_punctatus
ENSMNEG00000034683	RBM38	60	97.222	ENSJJAG00000016299	-	90	97.222	Jaculus_jaculus
ENSMNEG00000034683	RBM38	74	86.517	ENSKMAG00000012402	rbm38	98	54.701	Kryptolebias_marmoratus
ENSMNEG00000034683	RBM38	81	85.859	ENSLBEG00000018878	rbm38	91	59.227	Labrus_bergylta
ENSMNEG00000034683	RBM38	78	93.617	ENSLBEG00000016163	RBM38	92	69.863	Labrus_bergylta
ENSMNEG00000034683	RBM38	82	91.000	ENSLOCG00000003456	rbm38	95	72.000	Lepisosteus_oculatus
ENSMNEG00000034683	RBM38	98	100.000	ENSMFAG00000043808	RBM38	98	100.000	Macaca_fascicularis
ENSMNEG00000034683	RBM38	100	100.000	ENSMMUG00000031391	RBM38	100	100.000	Macaca_mulatta
ENSMNEG00000034683	RBM38	77	81.720	ENSMLEG00000043261	-	88	84.404	Mandrillus_leucophaeus
ENSMNEG00000034683	RBM38	82	90.099	ENSMAMG00000020499	RBM38	95	65.254	Mastacembelus_armatus
ENSMNEG00000034683	RBM38	81	84.848	ENSMAMG00000024135	rbm38	91	59.657	Mastacembelus_armatus
ENSMNEG00000034683	RBM38	81	84.848	ENSMZEG00005026036	rbm38	91	58.369	Maylandia_zebra
ENSMNEG00000034683	RBM38	78	94.681	ENSMZEG00005000849	-	92	70.776	Maylandia_zebra
ENSMNEG00000034683	RBM38	100	95.868	ENSMAUG00000021211	Rbm38	100	92.469	Mesocricetus_auratus
ENSMNEG00000034683	RBM38	90	96.759	ENSMICG00000038011	RBM38	100	96.759	Microcebus_murinus
ENSMNEG00000034683	RBM38	100	93.388	ENSMOCG00000008715	Rbm38	100	91.632	Microtus_ochrogaster
ENSMNEG00000034683	RBM38	96	82.759	ENSMMOG00000020051	-	99	67.647	Mola_mola
ENSMNEG00000034683	RBM38	100	88.430	ENSMODG00000016458	RBM38	100	79.668	Monodelphis_domestica
ENSMNEG00000034683	RBM38	81	81.633	ENSMALG00000022327	rbm38	93	57.522	Monopterus_albus
ENSMNEG00000034683	RBM38	82	90.099	ENSMALG00000004680	RBM38	70	74.074	Monopterus_albus
ENSMNEG00000034683	RBM38	100	94.215	MGP_CAROLIEiJ_G0024745	Rbm38	100	93.305	Mus_caroli
ENSMNEG00000034683	RBM38	100	94.215	ENSMUSG00000027510	Rbm38	100	93.724	Mus_musculus
ENSMNEG00000034683	RBM38	100	95.041	MGP_PahariEiJ_G0026186	Rbm38	100	92.887	Mus_pahari
ENSMNEG00000034683	RBM38	100	94.215	MGP_SPRETEiJ_G0025665	Rbm38	100	93.305	Mus_spretus
ENSMNEG00000034683	RBM38	81	98.980	ENSMPUG00000006518	RBM38	93	97.861	Mustela_putorius_furo
ENSMNEG00000034683	RBM38	90	91.667	ENSMLUG00000011140	RBM38	100	91.667	Myotis_lucifugus
ENSMNEG00000034683	RBM38	60	93.243	ENSNGAG00000014017	-	64	93.243	Nannospalax_galili
ENSMNEG00000034683	RBM38	78	94.681	ENSNBRG00000022545	-	92	66.234	Neolamprologus_brichardi
ENSMNEG00000034683	RBM38	92	79.130	ENSNBRG00000022685	rbm38	98	60.000	Neolamprologus_brichardi
ENSMNEG00000034683	RBM38	100	80.992	ENSMEUG00000005475	-	100	80.435	Notamacropus_eugenii
ENSMNEG00000034683	RBM38	100	100.000	ENSODEG00000007980	RBM38	100	96.653	Octodon_degus
ENSMNEG00000034683	RBM38	78	94.681	ENSONIG00000020324	-	92	66.087	Oreochromis_niloticus
ENSMNEG00000034683	RBM38	81	84.848	ENSONIG00000017073	rbm38	93	58.621	Oreochromis_niloticus
ENSMNEG00000034683	RBM38	88	90.566	ENSOANG00000009259	RBM38	90	77.447	Ornithorhynchus_anatinus
ENSMNEG00000034683	RBM38	78	87.368	ENSORLG00000012154	rbm38	77	60.914	Oryzias_latipes
ENSMNEG00000034683	RBM38	78	93.617	ENSORLG00000027180	-	92	64.530	Oryzias_latipes
ENSMNEG00000034683	RBM38	80	85.714	ENSORLG00020017871	rbm38	91	56.410	Oryzias_latipes_hni
ENSMNEG00000034683	RBM38	78	93.617	ENSORLG00020020751	-	95	62.249	Oryzias_latipes_hni
ENSMNEG00000034683	RBM38	94	78.947	ENSORLG00015012606	rbm38	97	57.872	Oryzias_latipes_hsok
ENSMNEG00000034683	RBM38	78	93.617	ENSORLG00015017040	-	92	65.086	Oryzias_latipes_hsok
ENSMNEG00000034683	RBM38	80	84.694	ENSOMEG00000006805	rbm38	77	61.929	Oryzias_melastigma
ENSMNEG00000034683	RBM38	78	93.617	ENSOMEG00000023912	-	92	64.502	Oryzias_melastigma
ENSMNEG00000034683	RBM38	100	99.180	ENSOGAG00000029136	RBM38	100	97.500	Otolemur_garnettii
ENSMNEG00000034683	RBM38	100	98.347	ENSPPRG00000009507	RBM38	100	98.347	Panthera_pardus
ENSMNEG00000034683	RBM38	81	100.000	ENSPTRG00000045845	-	70	97.656	Pan_troglodytes
ENSMNEG00000034683	RBM38	100	99.174	ENSPTRG00000013661	RBM38	100	99.174	Pan_troglodytes
ENSMNEG00000034683	RBM38	100	100.000	ENSPANG00000020919	-	100	100.000	Papio_anubis
ENSMNEG00000034683	RBM38	99	76.695	ENSPANG00000033127	-	100	76.695	Papio_anubis
ENSMNEG00000034683	RBM38	83	92.079	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSMNEG00000034683	RBM38	84	85.849	ENSPKIG00000025417	rbm38	98	62.705	Paramormyrops_kingsleyae
ENSMNEG00000034683	RBM38	86	92.308	ENSPSIG00000011649	RBM38	95	79.464	Pelodiscus_sinensis
ENSMNEG00000034683	RBM38	81	84.848	ENSPMGG00000011343	rbm38	94	57.143	Periophthalmus_magnuspinnatus
ENSMNEG00000034683	RBM38	78	87.234	ENSPMGG00000017094	-	92	64.103	Periophthalmus_magnuspinnatus
ENSMNEG00000034683	RBM38	100	88.430	ENSPCIG00000013648	RBM38	100	79.253	Phascolarctos_cinereus
ENSMNEG00000034683	RBM38	78	90.426	ENSPFOG00000011658	rbm38	91	58.547	Poecilia_formosa
ENSMNEG00000034683	RBM38	78	95.745	ENSPLAG00000002500	-	92	66.949	Poecilia_latipinna
ENSMNEG00000034683	RBM38	78	90.426	ENSPLAG00000005218	rbm38	91	58.547	Poecilia_latipinna
ENSMNEG00000034683	RBM38	78	90.426	ENSPMEG00000015770	rbm38	91	58.547	Poecilia_mexicana
ENSMNEG00000034683	RBM38	78	90.426	ENSPREG00000007398	rbm38	91	58.974	Poecilia_reticulata
ENSMNEG00000034683	RBM38	100	99.180	ENSPCOG00000026201	RBM38	100	99.180	Propithecus_coquereli
ENSMNEG00000034683	RBM38	100	66.946	ENSPVAG00000006457	RBM38	100	66.946	Pteropus_vampyrus
ENSMNEG00000034683	RBM38	81	93.939	ENSPNYG00000019727	-	100	89.744	Pundamilia_nyererei
ENSMNEG00000034683	RBM38	86	78.704	ENSPNYG00000021373	rbm38	98	58.996	Pundamilia_nyererei
ENSMNEG00000034683	RBM38	82	91.089	ENSPNAG00000015123	-	96	78.030	Pygocentrus_nattereri
ENSMNEG00000034683	RBM38	79	91.667	ENSPNAG00000010596	rbm38	76	69.892	Pygocentrus_nattereri
ENSMNEG00000034683	RBM38	100	95.041	ENSRNOG00000006420	Rbm38	100	93.305	Rattus_norvegicus
ENSMNEG00000034683	RBM38	100	88.430	ENSRROG00000036388	-	100	81.857	Rhinopithecus_roxellana
ENSMNEG00000034683	RBM38	88	100.000	ENSSBOG00000031053	RBM38	100	100.000	Saimiri_boliviensis_boliviensis
ENSMNEG00000034683	RBM38	78	93.617	ENSSFOG00015004453	rbm38	92	68.468	Scleropages_formosus
ENSMNEG00000034683	RBM38	81	85.859	ENSSDUG00000022611	rbm38	91	60.515	Seriola_dumerili
ENSMNEG00000034683	RBM38	78	93.617	ENSSDUG00000021082	RBM38	92	66.667	Seriola_dumerili
ENSMNEG00000034683	RBM38	81	85.859	ENSSLDG00000010845	rbm38	90	64.019	Seriola_lalandi_dorsalis
ENSMNEG00000034683	RBM38	78	93.617	ENSSLDG00000011778	RBM38	92	66.667	Seriola_lalandi_dorsalis
ENSMNEG00000034683	RBM38	81	85.859	ENSSPAG00000011113	rbm38	91	59.657	Stegastes_partitus
ENSMNEG00000034683	RBM38	78	93.617	ENSSPAG00000020989	RBM38	91	69.014	Stegastes_partitus
ENSMNEG00000034683	RBM38	100	99.174	ENSSSCG00000007504	RBM38	100	96.653	Sus_scrofa
ENSMNEG00000034683	RBM38	78	88.298	ENSTRUG00000024954	rbm38	91	56.332	Takifugu_rubripes
ENSMNEG00000034683	RBM38	78	93.617	ENSTRUG00000019869	-	92	68.240	Takifugu_rubripes
ENSMNEG00000034683	RBM38	78	94.681	ENSTNIG00000007093	-	97	70.721	Tetraodon_nigroviridis
ENSMNEG00000034683	RBM38	98	89.916	ENSTBEG00000001689	-	64	89.916	Tupaia_belangeri
ENSMNEG00000034683	RBM38	100	99.174	ENSUAMG00000019780	RBM38	100	96.653	Ursus_americanus
ENSMNEG00000034683	RBM38	100	99.174	ENSVVUG00000017246	RBM38	100	95.397	Vulpes_vulpes
ENSMNEG00000034683	RBM38	83	90.099	ENSXETG00000011268	rbm38	100	75.111	Xenopus_tropicalis
ENSMNEG00000034683	RBM38	78	95.745	ENSXCOG00000017324	-	60	78.947	Xiphophorus_couchianus
ENSMNEG00000034683	RBM38	77	91.398	ENSXMAG00000023662	rbm38	91	58.798	Xiphophorus_maculatus