EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000034854 (Gene tree)
Gene ID: 105485034
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 103794 bases
Position: chrKQ004831.1:5101596-5205389
Accession: 105485034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000022415	Ago_hook	PF10427.9	2.6e-19	1	1
ENSMNEP00000022422	Ago_hook	PF10427.9	5.6e-19	1	1
ENSMNEP00000022411	Ago_hook	PF10427.9	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000046670	TNRC6A-202	5760	XM_011747206	ENSMNEP00000022415	1919 (aa)	XP_024649653	A0A2K6CFH5
ENSMNET00000046666	TNRC6A-201	8460	XM_011747198	ENSMNEP00000022411	1968 (aa)	XP_011745501	A0A2K6CFG7
ENSMNET00000046677	TNRC6A-203	5808	-	ENSMNEP00000022422	1935 (aa)	-	A0A2K6CFJ7

Gene Model

Click here to download ENSMNEG00000034854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000034854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000034854	TNRC6A	99	42.289	ENSMNEG00000030405	TNRC6C	99	42.927
ENSMNEG00000034854	TNRC6A	97	40.924	ENSMNEG00000042745	TNRC6B	99	36.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000034854	TNRC6A	100	98.882	ENSG00000090905	TNRC6A	100	98.882	Homo_sapiens
ENSMNEG00000034854	TNRC6A	98	96.408	ENSAMEG00000009333	TNRC6A	100	96.408	Ailuropoda_melanoleuca
ENSMNEG00000034854	TNRC6A	99	80.755	ENSAPLG00000009978	TNRC6A	100	81.672	Anas_platyrhynchos
ENSMNEG00000034854	TNRC6A	100	54.327	ENSACAG00000011857	TNRC6A	100	56.347	Anolis_carolinensis
ENSMNEG00000034854	TNRC6A	100	98.476	ENSANAG00000025252	TNRC6A	100	98.476	Aotus_nancymaae
ENSMNEG00000034854	TNRC6A	92	55.776	ENSAMXG00000019919	tnrc6a	99	57.110	Astyanax_mexicanus
ENSMNEG00000034854	TNRC6A	100	94.789	ENSBTAG00000017999	TNRC6A	100	94.424	Bos_taurus
ENSMNEG00000034854	TNRC6A	100	98.732	ENSCJAG00000020677	TNRC6A	100	98.732	Callithrix_jacchus
ENSMNEG00000034854	TNRC6A	99	96.289	ENSCAFG00000017531	TNRC6A	100	96.289	Canis_familiaris
ENSMNEG00000034854	TNRC6A	99	93.909	ENSCAFG00020021160	TNRC6A	99	94.833	Canis_lupus_dingo
ENSMNEG00000034854	TNRC6A	100	94.372	ENSCHIG00000019448	TNRC6A	100	95.050	Capra_hircus
ENSMNEG00000034854	TNRC6A	100	96.596	ENSTSYG00000012711	TNRC6A	100	96.596	Carlito_syrichta
ENSMNEG00000034854	TNRC6A	99	95.722	ENSCPOG00000036684	TNRC6A	100	95.722	Cavia_porcellus
ENSMNEG00000034854	TNRC6A	100	98.730	ENSCCAG00000033664	TNRC6A	100	98.730	Cebus_capucinus
ENSMNEG00000034854	TNRC6A	99	99.530	ENSCATG00000019284	TNRC6A	99	99.527	Cercocebus_atys
ENSMNEG00000034854	TNRC6A	100	91.298	ENSCLAG00000010217	TNRC6A	100	91.245	Chinchilla_lanigera
ENSMNEG00000034854	TNRC6A	100	99.187	ENSCSAG00000006561	TNRC6A	100	99.187	Chlorocebus_sabaeus
ENSMNEG00000034854	TNRC6A	95	91.627	ENSCHOG00000009374	TNRC6A	95	91.627	Choloepus_hoffmanni
ENSMNEG00000034854	TNRC6A	90	82.448	ENSCPBG00000001881	TNRC6A	99	82.448	Chrysemys_picta_bellii
ENSMNEG00000034854	TNRC6A	100	99.136	ENSCANG00000041549	TNRC6A	100	99.136	Colobus_angolensis_palliatus
ENSMNEG00000034854	TNRC6A	100	94.427	ENSCGRG00001015021	Tnrc6a	100	94.427	Cricetulus_griseus_chok1gshd
ENSMNEG00000034854	TNRC6A	99	93.483	ENSCGRG00000013351	Tnrc6a	99	93.535	Cricetulus_griseus_crigri
ENSMNEG00000034854	TNRC6A	92	55.881	ENSDARG00000079688	tnrc6a	99	57.295	Danio_rerio
ENSMNEG00000034854	TNRC6A	99	92.475	ENSDNOG00000013989	TNRC6A	99	93.351	Dasypus_novemcinctus
ENSMNEG00000034854	TNRC6A	98	85.156	ENSETEG00000014658	TNRC6A	99	85.156	Echinops_telfairi
ENSMNEG00000034854	TNRC6A	100	96.089	ENSEASG00005017693	TNRC6A	100	96.887	Equus_asinus_asinus
ENSMNEG00000034854	TNRC6A	100	96.089	ENSECAG00000025056	TNRC6A	100	96.887	Equus_caballus
ENSMNEG00000034854	TNRC6A	99	88.345	ENSEEUG00000004530	TNRC6A	99	89.172	Erinaceus_europaeus
ENSMNEG00000034854	TNRC6A	100	95.020	ENSFCAG00000025236	TNRC6A	100	95.020	Felis_catus
ENSMNEG00000034854	TNRC6A	99	78.485	ENSFALG00000003757	TNRC6A	99	79.589	Ficedula_albicollis
ENSMNEG00000034854	TNRC6A	90	82.478	ENSGALG00000006068	TNRC6A	99	82.882	Gallus_gallus
ENSMNEG00000034854	TNRC6A	90	81.656	ENSGAGG00000023209	TNRC6A	99	81.944	Gopherus_agassizii
ENSMNEG00000034854	TNRC6A	99	98.770	ENSGGOG00000005137	TNRC6A	99	98.770	Gorilla_gorilla
ENSMNEG00000034854	TNRC6A	95	72.589	ENSHGLG00000007368	-	93	73.094	Heterocephalus_glaber_female
ENSMNEG00000034854	TNRC6A	99	93.675	ENSHGLG00000012474	-	100	93.570	Heterocephalus_glaber_female
ENSMNEG00000034854	TNRC6A	99	93.100	ENSHGLG00100012496	-	100	93.048	Heterocephalus_glaber_male
ENSMNEG00000034854	TNRC6A	99	95.888	ENSSTOG00000023394	TNRC6A	99	95.888	Ictidomys_tridecemlineatus
ENSMNEG00000034854	TNRC6A	99	68.638	ENSLACG00000006277	TNRC6A	100	70.144	Latimeria_chalumnae
ENSMNEG00000034854	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSMNEG00000034854	TNRC6A	98	94.287	ENSLAFG00000004209	TNRC6A	99	94.231	Loxodonta_africana
ENSMNEG00000034854	TNRC6A	100	99.793	ENSMFAG00000003824	TNRC6A	100	99.793	Macaca_fascicularis
ENSMNEG00000034854	TNRC6A	100	99.746	ENSMMUG00000020428	TNRC6A	100	99.746	Macaca_mulatta
ENSMNEG00000034854	TNRC6A	99	98.697	ENSMLEG00000042737	TNRC6A	97	98.697	Mandrillus_leucophaeus
ENSMNEG00000034854	TNRC6A	99	79.587	ENSMGAG00000006455	TNRC6A	99	80.192	Meleagris_gallopavo
ENSMNEG00000034854	TNRC6A	100	94.167	ENSMAUG00000012750	Tnrc6a	100	94.167	Mesocricetus_auratus
ENSMNEG00000034854	TNRC6A	100	97.713	ENSMICG00000030685	TNRC6A	100	97.713	Microcebus_murinus
ENSMNEG00000034854	TNRC6A	100	94.633	ENSMOCG00000000152	Tnrc6a	100	94.633	Microtus_ochrogaster
ENSMNEG00000034854	TNRC6A	99	80.945	ENSMODG00000016348	TNRC6A	99	81.710	Monodelphis_domestica
ENSMNEG00000034854	TNRC6A	99	92.902	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.925	Mus_caroli
ENSMNEG00000034854	TNRC6A	100	93.382	ENSMUSG00000052707	Tnrc6a	99	95.282	Mus_musculus
ENSMNEG00000034854	TNRC6A	99	93.537	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.568	Mus_pahari
ENSMNEG00000034854	TNRC6A	100	93.598	MGP_SPRETEiJ_G0031539	Tnrc6a	100	95.282	Mus_spretus
ENSMNEG00000034854	TNRC6A	97	83.904	ENSMPUG00000012324	TNRC6A	100	83.850	Mustela_putorius_furo
ENSMNEG00000034854	TNRC6A	99	91.567	ENSMLUG00000002701	TNRC6A	100	92.529	Myotis_lucifugus
ENSMNEG00000034854	TNRC6A	99	95.099	ENSNGAG00000020702	Tnrc6a	100	95.099	Nannospalax_galili
ENSMNEG00000034854	TNRC6A	99	97.656	ENSNLEG00000011851	TNRC6A	98	97.656	Nomascus_leucogenys
ENSMNEG00000034854	TNRC6A	77	89.480	ENSMEUG00000015959	-	77	89.480	Notamacropus_eugenii
ENSMNEG00000034854	TNRC6A	96	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSMNEG00000034854	TNRC6A	99	89.537	ENSODEG00000012802	TNRC6A	99	89.222	Octodon_degus
ENSMNEG00000034854	TNRC6A	88	82.295	ENSOANG00000007672	TNRC6A	99	83.256	Ornithorhynchus_anatinus
ENSMNEG00000034854	TNRC6A	99	91.675	ENSOCUG00000004325	TNRC6A	100	92.637	Oryctolagus_cuniculus
ENSMNEG00000034854	TNRC6A	99	96.672	ENSOGAG00000006666	TNRC6A	100	96.672	Otolemur_garnettii
ENSMNEG00000034854	TNRC6A	99	93.616	ENSOARG00000017950	TNRC6A	98	95.399	Ovis_aries
ENSMNEG00000034854	TNRC6A	99	98.881	ENSPPAG00000028379	TNRC6A	100	98.881	Pan_paniscus
ENSMNEG00000034854	TNRC6A	100	95.020	ENSPPRG00000005861	TNRC6A	100	95.020	Panthera_pardus
ENSMNEG00000034854	TNRC6A	99	94.201	ENSPTIG00000006346	TNRC6A	99	94.151	Panthera_tigris_altaica
ENSMNEG00000034854	TNRC6A	99	97.238	ENSPTRG00000007898	TNRC6A	99	97.238	Pan_troglodytes
ENSMNEG00000034854	TNRC6A	100	97.205	ENSPANG00000018523	TNRC6A	100	97.205	Papio_anubis
ENSMNEG00000034854	TNRC6A	89	78.054	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSMNEG00000034854	TNRC6A	76	77.635	ENSPSIG00000003965	TNRC6A	100	77.635	Pelodiscus_sinensis
ENSMNEG00000034854	TNRC6A	100	94.216	ENSPEMG00000016318	Tnrc6a	100	94.627	Peromyscus_maniculatus_bairdii
ENSMNEG00000034854	TNRC6A	99	82.503	ENSPCIG00000012106	TNRC6A	100	83.602	Phascolarctos_cinereus
ENSMNEG00000034854	TNRC6A	99	98.373	ENSPPYG00000007202	TNRC6A	100	98.373	Pongo_abelii
ENSMNEG00000034854	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSMNEG00000034854	TNRC6A	100	95.274	ENSPCOG00000010134	TNRC6A	100	95.274	Propithecus_coquereli
ENSMNEG00000034854	TNRC6A	89	70.712	ENSPVAG00000012066	TNRC6A	99	70.883	Pteropus_vampyrus
ENSMNEG00000034854	TNRC6A	100	94.271	ENSRNOG00000024737	Tnrc6a	100	94.115	Rattus_norvegicus
ENSMNEG00000034854	TNRC6A	100	99.070	ENSRBIG00000014222	TNRC6A	100	99.073	Rhinopithecus_bieti
ENSMNEG00000034854	TNRC6A	100	98.933	ENSRROG00000032360	TNRC6A	100	98.933	Rhinopithecus_roxellana
ENSMNEG00000034854	TNRC6A	99	96.564	ENSSBOG00000036197	TNRC6A	100	99.298	Saimiri_boliviensis_boliviensis
ENSMNEG00000034854	TNRC6A	90	83.875	ENSSHAG00000008811	TNRC6A	99	84.330	Sarcophilus_harrisii
ENSMNEG00000034854	TNRC6A	88	67.515	ENSSFOG00015008920	tnrc6a	99	69.115	Scleropages_formosus
ENSMNEG00000034854	TNRC6A	72	83.877	ENSSARG00000002479	TNRC6A	89	83.152	Sorex_araneus
ENSMNEG00000034854	TNRC6A	91	78.244	ENSSPUG00000010525	TNRC6A	100	79.115	Sphenodon_punctatus
ENSMNEG00000034854	TNRC6A	100	96.254	ENSSSCG00000038870	TNRC6A	100	97.718	Sus_scrofa
ENSMNEG00000034854	TNRC6A	99	79.316	ENSTGUG00000006142	TNRC6A	100	79.886	Taeniopygia_guttata
ENSMNEG00000034854	TNRC6A	98	94.430	ENSTBEG00000014965	TNRC6A	100	94.430	Tupaia_belangeri
ENSMNEG00000034854	TNRC6A	94	97.950	ENSTTRG00000002008	TNRC6A	93	97.950	Tursiops_truncatus
ENSMNEG00000034854	TNRC6A	79	95.175	ENSUAMG00000006656	-	93	95.175	Ursus_americanus
ENSMNEG00000034854	TNRC6A	100	94.287	ENSUMAG00000008274	TNRC6A	100	97.410	Ursus_maritimus
ENSMNEG00000034854	TNRC6A	53	97.273	ENSVPAG00000010764	-	52	97.273	Vicugna_pacos
ENSMNEG00000034854	TNRC6A	96	100.000	ENSVVUG00000005380	TNRC6A	100	96.342	Vulpes_vulpes
ENSMNEG00000034854	TNRC6A	95	64.923	ENSXETG00000030437	TNRC6A	99	66.127	Xenopus_tropicalis