EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000034999 (Gene tree)
Gene ID: 105498602
Gene Symbol: TRIM39
Alias: RNF23
Full Name: tripartite motif containing 39
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 19524 bases
Position: chrKQ006106.1:597526-617049
Accession: 105498596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000022802	Rpr2	PF04032.16	6.8e-17	1	1
ENSMNEP00000022776	Rpr2	PF04032.16	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000047032	TRIM39-202	1512	-	ENSMNEP00000022776	503 (aa)	-	A0A2K6CGI9
ENSMNET00000047059	TRIM39-204	534	XM_011770773	ENSMNEP00000022802	177 (aa)	XP_011769075	A0A2K6CGL8
ENSMNET00000046982	TRIM39-201	4878	XM_011770762	ENSMNEP00000022726	488 (aa)	XP_011769064	A0A2K6CGD2
ENSMNET00000047047	TRIM39-203	1557	-	ENSMNEP00000022790	518 (aa)	-	A0A2K6CGL3

Gene Model

Click here to download ENSMNEG00000034999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000034999's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000034999	TRIM39	100	98.410	ENSANAG00000032075	TRIM39	100	98.410	Aotus_nancymaae
ENSMNEG00000034999	TRIM39	100	97.813	ENSCJAG00000020681	TRIM39	100	97.813	Callithrix_jacchus
ENSMNEG00000034999	TRIM39	100	98.211	ENSCCAG00000036784	TRIM39	100	98.211	Cebus_capucinus
ENSMNEG00000034999	TRIM39	100	99.602	ENSCATG00000044044	TRIM39	100	99.602	Cercocebus_atys
ENSMNEG00000034999	TRIM39	100	98.608	ENSGGOG00000016403	TRIM39	100	98.608	Gorilla_gorilla
ENSMNEG00000034999	TRIM39	100	100.000	ENSMFAG00000046182	TRIM39	100	100.000	Macaca_fascicularis
ENSMNEG00000034999	TRIM39	100	99.801	ENSMMUG00000011682	RPP21	100	99.801	Macaca_mulatta
ENSMNEG00000034999	TRIM39	100	99.801	ENSMLEG00000034263	TRIM39	100	99.801	Mandrillus_leucophaeus
ENSMNEG00000034999	TRIM39	100	98.608	ENSNLEG00000005026	TRIM39	100	98.608	Nomascus_leucogenys
ENSMNEG00000034999	TRIM39	100	98.807	ENSPPAG00000040674	TRIM39	100	98.807	Pan_paniscus
ENSMNEG00000034999	TRIM39	100	98.807	ENSPTRG00000017923	TRIM39	100	98.807	Pan_troglodytes
ENSMNEG00000034999	TRIM39	100	99.602	ENSPANG00000000655	TRIM39	100	99.602	Papio_anubis
ENSMNEG00000034999	TRIM39	100	99.602	ENSRBIG00000040889	TRIM39	100	99.602	Rhinopithecus_bieti
ENSMNEG00000034999	TRIM39	100	99.602	ENSRROG00000036496	TRIM39	100	99.602	Rhinopithecus_roxellana