EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000035094 (Gene tree)
Gene ID: 105475185
Gene Symbol: -
Alias: -
Full Name: survival of motor neuron 1%2C telomeric
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 36597 bases
Position: chrKQ009049.1:16679585-16716181
Accession: 105475185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000023068	SMN	PF06003.12	1.3e-105	1	1
ENSMNEP00000023075	SMN	PF06003.12	1.7e-101	1	1
ENSMNEP00000023053	SMN	PF06003.12	1.9e-101	1	1
ENSMNEP00000023072	SMN	PF06003.12	7.7e-93	1	2
ENSMNEP00000023072	SMN	PF06003.12	7.7e-93	2	2
ENSMNEP00000023073	SMN	PF06003.12	1.9e-57	1	2
ENSMNEP00000023073	SMN	PF06003.12	1.9e-57	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000047336	-	885	-	ENSMNEP00000023075	294 (aa)	-	A0A2K6CHC9
ENSMNET00000047314	-	849	-	ENSMNEP00000023053	282 (aa)	-	A0A2K6CHD7
ENSMNET00000047334	-	684	-	ENSMNEP00000023073	227 (aa)	-	A0A2K6CHF6
ENSMNET00000047333	-	789	-	ENSMNEP00000023072	262 (aa)	-	A0A2K6CHD9
ENSMNET00000047329	-	885	XM_011730227	ENSMNEP00000023068	294 (aa)	XP_011728529	A0A2K6CHF1

Gene Model

Click here to download ENSMNEG00000035094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000035094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000035094	-	76	84.753	ENSMNEG00000036423	-	87	84.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000035094	-	100	97.802	ENSG00000205571	SMN2	100	97.802	Homo_sapiens
ENSMNEG00000035094	-	100	97.802	ENSG00000172062	SMN1	100	97.802	Homo_sapiens
ENSMNEG00000035094	-	92	52.809	ENSAPOG00000011324	smn1	94	53.237	Acanthochromis_polyacanthus
ENSMNEG00000035094	-	94	90.000	ENSAMEG00000003316	-	93	88.612	Ailuropoda_melanoleuca
ENSMNEG00000035094	-	91	52.060	ENSACIG00000019772	-	97	51.154	Amphilophus_citrinellus
ENSMNEG00000035094	-	92	52.809	ENSAOCG00000024444	smn1	94	53.237	Amphiprion_ocellaris
ENSMNEG00000035094	-	92	53.184	ENSAPEG00000016504	smn1	94	53.597	Amphiprion_percula
ENSMNEG00000035094	-	92	54.613	ENSATEG00000002182	smn1	81	53.875	Anabas_testudineus
ENSMNEG00000035094	-	68	55.959	ENSAPLG00000010912	-	99	53.922	Anas_platyrhynchos
ENSMNEG00000035094	-	81	81.633	ENSACAG00000010017	-	94	57.401	Anolis_carolinensis
ENSMNEG00000035094	-	100	91.216	ENSANAG00000032133	-	100	91.216	Aotus_nancymaae
ENSMNEG00000035094	-	92	54.815	ENSACLG00000007308	smn1	88	55.985	Astatotilapia_calliptera
ENSMNEG00000035094	-	54	57.746	ENSAMXG00000013884	smn1	97	47.826	Astyanax_mexicanus
ENSMNEG00000035094	-	95	84.701	ENSBTAG00000005743	SMN2	97	83.986	Bos_taurus
ENSMNEG00000035094	-	85	33.188	WBGene00004887	smn-1	94	32.432	Caenorhabditis_elegans
ENSMNEG00000035094	-	100	97.802	ENSCJAG00000016290	-	100	97.802	Callithrix_jacchus
ENSMNEG00000035094	-	95	87.687	ENSCAFG00000007812	SMN	97	87.544	Canis_familiaris
ENSMNEG00000035094	-	95	87.687	ENSCAFG00020019229	-	90	87.544	Canis_lupus_dingo
ENSMNEG00000035094	-	95	85.502	ENSCHIG00000015559	-	95	84.752	Capra_hircus
ENSMNEG00000035094	-	99	90.110	ENSTSYG00000012058	-	96	95.000	Carlito_syrichta
ENSMNEG00000035094	-	77	70.776	ENSCAPG00000011021	-	100	69.737	Cavia_aperea
ENSMNEG00000035094	-	99	83.516	ENSCPOG00000036973	-	99	82.253	Cavia_porcellus
ENSMNEG00000035094	-	100	81.250	ENSCPOG00000012328	-	96	82.230	Cavia_porcellus
ENSMNEG00000035094	-	100	96.703	ENSCCAG00000018127	-	100	96.703	Cebus_capucinus
ENSMNEG00000035094	-	100	98.901	ENSCATG00000037002	-	100	98.901	Cercocebus_atys
ENSMNEG00000035094	-	99	81.132	ENSCLAG00000000284	-	99	81.132	Chinchilla_lanigera
ENSMNEG00000035094	-	100	98.980	ENSCSAG00000015688	-	100	98.980	Chlorocebus_sabaeus
ENSMNEG00000035094	-	81	85.938	ENSCHOG00000007346	-	100	74.603	Choloepus_hoffmanni
ENSMNEG00000035094	-	98	61.538	ENSCPBG00000010968	-	98	61.798	Chrysemys_picta_bellii
ENSMNEG00000035094	-	99	92.115	ENSCANG00000033324	-	100	86.260	Colobus_angolensis_palliatus
ENSMNEG00000035094	-	100	98.901	ENSCANG00000038242	-	100	98.901	Colobus_angolensis_palliatus
ENSMNEG00000035094	-	99	64.726	ENSCGRG00001016998	-	96	65.125	Cricetulus_griseus_chok1gshd
ENSMNEG00000035094	-	99	85.714	ENSCGRG00001017959	-	97	84.342	Cricetulus_griseus_chok1gshd
ENSMNEG00000035094	-	99	85.714	ENSCGRG00000007698	Smn1	97	84.342	Cricetulus_griseus_crigri
ENSMNEG00000035094	-	82	64.286	ENSCSEG00000015227	smn1	97	50.534	Cynoglossus_semilaevis
ENSMNEG00000035094	-	94	52.416	ENSCVAG00000007498	smn1	94	52.381	Cyprinodon_variegatus
ENSMNEG00000035094	-	94	53.333	ENSDARG00000018494	smn1	96	54.182	Danio_rerio
ENSMNEG00000035094	-	82	83.817	ENSDNOG00000007283	-	99	83.817	Dasypus_novemcinctus
ENSMNEG00000035094	-	77	74.627	ENSDNOG00000045949	-	86	74.020	Dasypus_novemcinctus
ENSMNEG00000035094	-	99	84.397	ENSDORG00000007082	Smn1	99	80.412	Dipodomys_ordii
ENSMNEG00000035094	-	80	70.476	ENSETEG00000001406	-	89	70.652	Echinops_telfairi
ENSMNEG00000035094	-	94	39.796	ENSEBUG00000011902	smn1	95	38.849	Eptatretus_burgeri
ENSMNEG00000035094	-	99	77.739	ENSEASG00005018000	-	89	84.190	Equus_asinus_asinus
ENSMNEG00000035094	-	95	88.571	ENSECAG00000015215	-	96	88.571	Equus_caballus
ENSMNEG00000035094	-	89	81.746	ENSEEUG00000015777	-	100	81.746	Erinaceus_europaeus
ENSMNEG00000035094	-	93	55.515	ENSELUG00000018067	smn1	96	53.214	Esox_lucius
ENSMNEG00000035094	-	99	88.530	ENSFCAG00000028292	SMN	97	89.680	Felis_catus
ENSMNEG00000035094	-	90	60.700	ENSFALG00000012320	-	93	58.955	Ficedula_albicollis
ENSMNEG00000035094	-	99	80.208	ENSFDAG00000017683	-	99	80.471	Fukomys_damarensis
ENSMNEG00000035094	-	68	57.303	ENSFHEG00000018508	smn1	96	51.292	Fundulus_heteroclitus
ENSMNEG00000035094	-	97	49.451	ENSGMOG00000017279	smn1	93	50.000	Gadus_morhua
ENSMNEG00000035094	-	93	59.623	ENSGALG00000002430	SMN	97	57.246	Gallus_gallus
ENSMNEG00000035094	-	90	56.198	ENSGAFG00000009501	smn1	93	56.432	Gambusia_affinis
ENSMNEG00000035094	-	92	54.615	ENSGACG00000010584	smn1	91	53.077	Gasterosteus_aculeatus
ENSMNEG00000035094	-	96	63.636	ENSGAGG00000011374	-	96	61.511	Gopherus_agassizii
ENSMNEG00000035094	-	92	38.071	ENSGAGG00000013639	-	91	38.144	Gopherus_agassizii
ENSMNEG00000035094	-	100	83.206	ENSGGOG00000026704	-	99	96.667	Gorilla_gorilla
ENSMNEG00000035094	-	97	97.802	ENSGGOG00000003872	-	100	97.561	Gorilla_gorilla
ENSMNEG00000035094	-	92	55.725	ENSHBUG00000013987	smn1	94	55.805	Haplochromis_burtoni
ENSMNEG00000035094	-	99	79.461	ENSHGLG00000001018	-	96	80.769	Heterocephalus_glaber_female
ENSMNEG00000035094	-	99	79.110	ENSHGLG00000001905	-	99	79.110	Heterocephalus_glaber_female
ENSMNEG00000035094	-	99	79.461	ENSHGLG00100011252	-	96	80.769	Heterocephalus_glaber_male
ENSMNEG00000035094	-	99	78.853	ENSHGLG00100018676	-	100	79.078	Heterocephalus_glaber_male
ENSMNEG00000035094	-	78	82.609	ENSHCOG00000017136	smn1	87	51.331	Hippocampus_comes
ENSMNEG00000035094	-	93	51.095	ENSIPUG00000012580	smn1	85	50.000	Ictalurus_punctatus
ENSMNEG00000035094	-	99	87.814	ENSSTOG00000012288	-	100	87.814	Ictidomys_tridecemlineatus
ENSMNEG00000035094	-	66	61.494	ENSJJAG00000014853	-	89	65.143	Jaculus_jaculus
ENSMNEG00000035094	-	92	55.109	ENSKMAG00000007239	smn1	96	53.435	Kryptolebias_marmoratus
ENSMNEG00000035094	-	92	52.190	ENSLBEG00000022550	smn1	94	53.957	Labrus_bergylta
ENSMNEG00000035094	-	93	37.410	ENSLACG00000009808	-	90	39.350	Latimeria_chalumnae
ENSMNEG00000035094	-	93	53.788	ENSLOCG00000011339	smn1	93	56.379	Lepisosteus_oculatus
ENSMNEG00000035094	-	99	87.912	ENSLAFG00000003425	-	100	81.690	Loxodonta_africana
ENSMNEG00000035094	-	100	100.000	ENSMFAG00000031523	SMN1	100	100.000	Macaca_fascicularis
ENSMNEG00000035094	-	100	95.604	ENSMFAG00000008812	-	100	93.537	Macaca_fascicularis
ENSMNEG00000035094	-	100	100.000	ENSMMUG00000020214	SMN1	100	100.000	Macaca_mulatta
ENSMNEG00000035094	-	100	93.407	ENSMMUG00000030594	-	100	92.857	Macaca_mulatta
ENSMNEG00000035094	-	100	99.291	ENSMLEG00000041902	-	100	99.291	Mandrillus_leucophaeus
ENSMNEG00000035094	-	92	53.383	ENSMAMG00000011034	smn1	94	52.174	Mastacembelus_armatus
ENSMNEG00000035094	-	92	53.435	ENSMZEG00005013634	smn1	94	55.805	Maylandia_zebra
ENSMNEG00000035094	-	68	55.959	ENSMGAG00000008889	-	97	52.941	Meleagris_gallopavo
ENSMNEG00000035094	-	99	83.516	ENSMAUG00000010262	Smn1	96	83.513	Mesocricetus_auratus
ENSMNEG00000035094	-	99	89.011	ENSMICG00000034708	-	99	89.011	Microcebus_murinus
ENSMNEG00000035094	-	99	83.154	ENSMOCG00000017833	Smn1	97	83.333	Microtus_ochrogaster
ENSMNEG00000035094	-	93	50.763	ENSMMOG00000005504	smn1	94	52.045	Mola_mola
ENSMNEG00000035094	-	84	83.333	ENSMODG00000001436	-	94	69.751	Monodelphis_domestica
ENSMNEG00000035094	-	93	50.000	ENSMALG00000008025	smn1	94	51.095	Monopterus_albus
ENSMNEG00000035094	-	99	84.615	MGP_CAROLIEiJ_G0018836	Smn1	96	84.643	Mus_caroli
ENSMNEG00000035094	-	99	83.871	ENSMUSG00000021645	Smn1	96	84.643	Mus_musculus
ENSMNEG00000035094	-	99	82.418	MGP_PahariEiJ_G0015911	Smn1	96	81.071	Mus_pahari
ENSMNEG00000035094	-	99	83.516	MGP_SPRETEiJ_G0019718	Smn1	96	83.929	Mus_spretus
ENSMNEG00000035094	-	99	88.929	ENSMPUG00000014470	-	95	89.963	Mustela_putorius_furo
ENSMNEG00000035094	-	94	90.000	ENSMLUG00000010603	-	92	88.153	Myotis_lucifugus
ENSMNEG00000035094	-	99	84.946	ENSNGAG00000019833	Smn1	97	85.409	Nannospalax_galili
ENSMNEG00000035094	-	92	54.579	ENSNBRG00000023000	smn1	94	55.556	Neolamprologus_brichardi
ENSMNEG00000035094	-	100	97.163	ENSNLEG00000004454	-	100	97.163	Nomascus_leucogenys
ENSMNEG00000035094	-	80	63.596	ENSMEUG00000011393	-	99	65.066	Notamacropus_eugenii
ENSMNEG00000035094	-	81	90.625	ENSOPRG00000002015	-	100	83.004	Ochotona_princeps
ENSMNEG00000035094	-	99	81.690	ENSODEG00000015976	-	97	81.690	Octodon_degus
ENSMNEG00000035094	-	92	55.830	ENSONIG00000011799	smn1	95	54.779	Oreochromis_niloticus
ENSMNEG00000035094	-	78	90.698	ENSOANG00000001626	-	95	64.835	Ornithorhynchus_anatinus
ENSMNEG00000035094	-	99	79.787	ENSOCUG00000025183	-	96	79.930	Oryctolagus_cuniculus
ENSMNEG00000035094	-	94	88.406	ENSOCUG00000026649	-	97	82.699	Oryctolagus_cuniculus
ENSMNEG00000035094	-	99	83.904	ENSOCUG00000017097	-	99	83.904	Oryctolagus_cuniculus
ENSMNEG00000035094	-	92	53.612	ENSORLG00000010552	smn1	94	53.137	Oryzias_latipes
ENSMNEG00000035094	-	92	52.692	ENSORLG00020007936	smn1	93	55.285	Oryzias_latipes_hni
ENSMNEG00000035094	-	92	50.558	ENSORLG00015022425	smn1	94	52.747	Oryzias_latipes_hsok
ENSMNEG00000035094	-	92	52.985	ENSOMEG00000007824	smn1	94	53.455	Oryzias_melastigma
ENSMNEG00000035094	-	95	81.181	ENSOGAG00000031414	-	94	81.181	Otolemur_garnettii
ENSMNEG00000035094	-	93	82.482	ENSOARG00000005425	-	99	82.482	Ovis_aries
ENSMNEG00000035094	-	100	97.802	ENSPPAG00000036640	-	100	97.802	Pan_paniscus
ENSMNEG00000035094	-	99	88.889	ENSPPRG00000005575	-	97	90.036	Panthera_pardus
ENSMNEG00000035094	-	99	89.247	ENSPTIG00000007745	-	97	90.391	Panthera_tigris_altaica
ENSMNEG00000035094	-	100	97.802	ENSPTRG00000016955	-	100	97.802	Pan_troglodytes
ENSMNEG00000035094	-	100	99.320	ENSPANG00000013601	-	100	99.320	Papio_anubis
ENSMNEG00000035094	-	100	94.505	ENSPANG00000000253	-	99	92.440	Papio_anubis
ENSMNEG00000035094	-	76	91.892	ENSPKIG00000011096	smn1	93	54.772	Paramormyrops_kingsleyae
ENSMNEG00000035094	-	92	60.741	ENSPSIG00000014787	-	89	58.955	Pelodiscus_sinensis
ENSMNEG00000035094	-	92	49.446	ENSPMGG00000012285	smn1	97	50.000	Periophthalmus_magnuspinnatus
ENSMNEG00000035094	-	90	41.985	ENSPMAG00000005004	smn1	93	40.780	Petromyzon_marinus
ENSMNEG00000035094	-	96	69.708	ENSPCIG00000025764	-	96	71.530	Phascolarctos_cinereus
ENSMNEG00000035094	-	92	53.612	ENSPFOG00000007786	smn1	94	53.309	Poecilia_formosa
ENSMNEG00000035094	-	90	57.851	ENSPLAG00000012071	smn1	93	58.091	Poecilia_latipinna
ENSMNEG00000035094	-	90	57.438	ENSPMEG00000017085	smn1	93	57.676	Poecilia_mexicana
ENSMNEG00000035094	-	90	57.851	ENSPREG00000005824	smn1	93	58.091	Poecilia_reticulata
ENSMNEG00000035094	-	91	95.911	ENSPPYG00000015533	-	97	95.911	Pongo_abelii
ENSMNEG00000035094	-	83	65.138	ENSPPYG00000019189	-	99	65.596	Pongo_abelii
ENSMNEG00000035094	-	87	85.938	ENSPCAG00000004187	-	99	80.741	Procavia_capensis
ENSMNEG00000035094	-	85	94.915	ENSPCOG00000022307	-	99	77.193	Propithecus_coquereli
ENSMNEG00000035094	-	99	89.247	ENSPVAG00000005977	-	99	89.041	Pteropus_vampyrus
ENSMNEG00000035094	-	92	54.579	ENSPNYG00000014148	smn1	94	55.556	Pundamilia_nyererei
ENSMNEG00000035094	-	93	51.145	ENSPNAG00000014007	smn1	84	49.123	Pygocentrus_nattereri
ENSMNEG00000035094	-	99	83.516	ENSRNOG00000018067	Smn1	96	83.274	Rattus_norvegicus
ENSMNEG00000035094	-	100	98.901	ENSRBIG00000037052	-	100	98.901	Rhinopithecus_bieti
ENSMNEG00000035094	-	93	92.308	ENSRBIG00000036775	-	95	83.214	Rhinopithecus_bieti
ENSMNEG00000035094	-	100	98.936	ENSRROG00000039399	-	100	98.936	Rhinopithecus_roxellana
ENSMNEG00000035094	-	100	82.847	ENSRROG00000031088	-	100	80.000	Rhinopithecus_roxellana
ENSMNEG00000035094	-	100	96.703	ENSSBOG00000011665	-	100	96.703	Saimiri_boliviensis_boliviensis
ENSMNEG00000035094	-	78	93.846	ENSSBOG00000020112	-	87	86.800	Saimiri_boliviensis_boliviensis
ENSMNEG00000035094	-	99	68.440	ENSSHAG00000001499	-	95	71.429	Sarcophilus_harrisii
ENSMNEG00000035094	-	90	54.472	ENSSFOG00015015507	smn1	94	54.472	Scleropages_formosus
ENSMNEG00000035094	-	93	51.311	ENSSMAG00000007922	smn1	94	52.518	Scophthalmus_maximus
ENSMNEG00000035094	-	92	52.920	ENSSDUG00000018533	smn1	94	53.047	Seriola_dumerili
ENSMNEG00000035094	-	92	53.285	ENSSLDG00000021135	smn1	94	53.405	Seriola_lalandi_dorsalis
ENSMNEG00000035094	-	90	71.622	ENSSPUG00000000373	-	95	62.545	Sphenodon_punctatus
ENSMNEG00000035094	-	92	53.160	ENSSPAG00000004345	smn1	94	54.545	Stegastes_partitus
ENSMNEG00000035094	-	97	65.748	ENSSSCG00000029127	-	96	66.129	Sus_scrofa
ENSMNEG00000035094	-	72	58.216	ENSSSCG00000033865	-	94	62.150	Sus_scrofa
ENSMNEG00000035094	-	99	88.889	ENSSSCG00000016970	-	99	88.699	Sus_scrofa
ENSMNEG00000035094	-	98	59.075	ENSTGUG00000001548	-	96	60.902	Taeniopygia_guttata
ENSMNEG00000035094	-	91	48.881	ENSTRUG00000000736	smn	95	49.627	Takifugu_rubripes
ENSMNEG00000035094	-	93	48.897	ENSTNIG00000009892	smn1	95	48.387	Tetraodon_nigroviridis
ENSMNEG00000035094	-	70	88.043	ENSTBEG00000002399	-	89	88.043	Tupaia_belangeri
ENSMNEG00000035094	-	94	87.500	ENSTTRG00000005080	-	95	84.698	Tursiops_truncatus
ENSMNEG00000035094	-	70	89.130	ENSUAMG00000024947	-	67	89.130	Ursus_americanus
ENSMNEG00000035094	-	94	91.250	ENSUMAG00000007842	-	72	89.324	Ursus_maritimus
ENSMNEG00000035094	-	88	90.000	ENSVPAG00000009887	-	96	76.030	Vicugna_pacos
ENSMNEG00000035094	-	95	87.687	ENSVVUG00000006934	-	97	87.544	Vulpes_vulpes
ENSMNEG00000035094	-	88	37.546	ENSXETG00000004912	-	79	60.317	Xenopus_tropicalis
ENSMNEG00000035094	-	90	67.901	ENSXETG00000018189	smn2	95	52.431	Xenopus_tropicalis
ENSMNEG00000035094	-	91	56.557	ENSXMAG00000001521	smn1	94	56.790	Xiphophorus_maculatus