EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000035968 (Gene tree)
Gene ID: 105484449
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 99310 bases
Position: chrKQ004830.1:3560128-3659437
Accession: 105484449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000024925	zf-CCCH	PF00642.24	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000049198	RC3H1-201	5898	XM_011746055	ENSMNEP00000024925	1133 (aa)	XP_011744357	A0A2K6CMN4

Gene Model

Click here to download ENSMNEG00000035968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000035968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000035968	RC3H1	96	52.650	ENSMNEG00000031599	RC3H2	95	81.345

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000035968	RC3H1	100	99.294	ENSG00000135870	RC3H1	100	99.294	Homo_sapiens
ENSMNEG00000035968	RC3H1	100	97.087	ENSAMEG00000015657	RC3H1	100	97.087	Ailuropoda_melanoleuca
ENSMNEG00000035968	RC3H1	100	88.405	ENSAPLG00000005341	RC3H1	100	88.405	Anas_platyrhynchos
ENSMNEG00000035968	RC3H1	100	85.428	ENSACAG00000015271	RC3H1	100	85.428	Anolis_carolinensis
ENSMNEG00000035968	RC3H1	100	99.117	ENSANAG00000036716	RC3H1	100	99.117	Aotus_nancymaae
ENSMNEG00000035968	RC3H1	100	96.028	ENSBTAG00000052708	RC3H1	100	96.028	Bos_taurus
ENSMNEG00000035968	RC3H1	100	98.764	ENSCJAG00000009106	RC3H1	100	98.764	Callithrix_jacchus
ENSMNEG00000035968	RC3H1	100	97.176	ENSCAFG00000014434	RC3H1	100	97.176	Canis_familiaris
ENSMNEG00000035968	RC3H1	100	97.090	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSMNEG00000035968	RC3H1	100	96.381	ENSCHIG00000002873	RC3H1	100	96.381	Capra_hircus
ENSMNEG00000035968	RC3H1	99	95.499	ENSTSYG00000003913	RC3H1	99	95.499	Carlito_syrichta
ENSMNEG00000035968	RC3H1	100	91.534	ENSCPOG00000004349	RC3H1	100	91.446	Cavia_porcellus
ENSMNEG00000035968	RC3H1	100	96.734	ENSCCAG00000025652	RC3H1	98	98.756	Cebus_capucinus
ENSMNEG00000035968	RC3H1	100	100.000	ENSCATG00000033497	RC3H1	100	100.000	Cercocebus_atys
ENSMNEG00000035968	RC3H1	100	95.062	ENSCLAG00000011267	RC3H1	100	95.062	Chinchilla_lanigera
ENSMNEG00000035968	RC3H1	96	99.540	ENSCSAG00000011823	RC3H1	85	99.540	Chlorocebus_sabaeus
ENSMNEG00000035968	RC3H1	100	89.912	ENSCPBG00000014670	RC3H1	100	89.912	Chrysemys_picta_bellii
ENSMNEG00000035968	RC3H1	100	99.647	ENSCANG00000032120	RC3H1	100	99.647	Colobus_angolensis_palliatus
ENSMNEG00000035968	RC3H1	100	94.351	ENSCGRG00001020812	Rc3h1	100	93.910	Cricetulus_griseus_chok1gshd
ENSMNEG00000035968	RC3H1	100	94.351	ENSCGRG00000011952	Rc3h1	100	93.910	Cricetulus_griseus_crigri
ENSMNEG00000035968	RC3H1	55	95.820	ENSDNOG00000011494	RC3H1	99	95.820	Dasypus_novemcinctus
ENSMNEG00000035968	RC3H1	100	96.028	ENSDORG00000004855	Rc3h1	100	96.028	Dipodomys_ordii
ENSMNEG00000035968	RC3H1	81	96.886	ENSETEG00000012064	RC3H1	87	96.886	Echinops_telfairi
ENSMNEG00000035968	RC3H1	100	96.117	ENSEASG00005017000	RC3H1	100	96.117	Equus_asinus_asinus
ENSMNEG00000035968	RC3H1	100	95.940	ENSECAG00000021208	RC3H1	100	95.940	Equus_caballus
ENSMNEG00000035968	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSMNEG00000035968	RC3H1	100	97.529	ENSFCAG00000014924	RC3H1	100	97.529	Felis_catus
ENSMNEG00000035968	RC3H1	100	87.424	ENSFALG00000002947	RC3H1	100	86.900	Ficedula_albicollis
ENSMNEG00000035968	RC3H1	100	95.238	ENSFDAG00000013303	RC3H1	100	95.238	Fukomys_damarensis
ENSMNEG00000035968	RC3H1	100	87.379	ENSGALG00000004587	RC3H1	100	87.379	Gallus_gallus
ENSMNEG00000035968	RC3H1	100	88.256	ENSGAGG00000018194	RC3H1	100	88.519	Gopherus_agassizii
ENSMNEG00000035968	RC3H1	100	92.348	ENSGGOG00000005735	RC3H1	100	92.348	Gorilla_gorilla
ENSMNEG00000035968	RC3H1	88	88.904	ENSHGLG00000004183	-	99	88.859	Heterocephalus_glaber_female
ENSMNEG00000035968	RC3H1	100	94.621	ENSHGLG00100008577	RC3H1	100	94.621	Heterocephalus_glaber_male
ENSMNEG00000035968	RC3H1	100	96.649	ENSSTOG00000016033	RC3H1	100	96.649	Ictidomys_tridecemlineatus
ENSMNEG00000035968	RC3H1	100	95.234	ENSJJAG00000018915	Rc3h1	100	95.057	Jaculus_jaculus
ENSMNEG00000035968	RC3H1	100	75.565	ENSLACG00000016186	RC3H1	100	78.699	Latimeria_chalumnae
ENSMNEG00000035968	RC3H1	97	97.632	ENSLAFG00000004367	RC3H1	100	97.632	Loxodonta_africana
ENSMNEG00000035968	RC3H1	100	99.912	ENSMFAG00000033725	RC3H1	100	99.912	Macaca_fascicularis
ENSMNEG00000035968	RC3H1	100	99.823	ENSMMUG00000000630	RC3H1	100	99.823	Macaca_mulatta
ENSMNEG00000035968	RC3H1	100	99.912	ENSMLEG00000037455	RC3H1	100	99.912	Mandrillus_leucophaeus
ENSMNEG00000035968	RC3H1	97	94.556	ENSMAUG00000020864	Rc3h1	100	94.052	Mesocricetus_auratus
ENSMNEG00000035968	RC3H1	100	97.617	ENSMICG00000003000	RC3H1	100	97.617	Microcebus_murinus
ENSMNEG00000035968	RC3H1	93	92.992	ENSMOCG00000016587	Rc3h1	98	92.614	Microtus_ochrogaster
ENSMNEG00000035968	RC3H1	100	92.416	ENSMODG00000004289	RC3H1	100	92.504	Monodelphis_domestica
ENSMNEG00000035968	RC3H1	100	93.910	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.469	Mus_caroli
ENSMNEG00000035968	RC3H1	100	93.733	ENSMUSG00000040423	Rc3h1	100	93.292	Mus_musculus
ENSMNEG00000035968	RC3H1	100	93.557	MGP_PahariEiJ_G0027992	Rc3h1	100	93.116	Mus_pahari
ENSMNEG00000035968	RC3H1	100	93.557	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.116	Mus_spretus
ENSMNEG00000035968	RC3H1	100	96.825	ENSMPUG00000004747	RC3H1	100	96.825	Mustela_putorius_furo
ENSMNEG00000035968	RC3H1	100	95.675	ENSMLUG00000011127	RC3H1	100	95.675	Myotis_lucifugus
ENSMNEG00000035968	RC3H1	100	95.940	ENSNGAG00000011135	Rc3h1	100	95.499	Nannospalax_galili
ENSMNEG00000035968	RC3H1	100	99.206	ENSNLEG00000015327	RC3H1	100	99.206	Nomascus_leucogenys
ENSMNEG00000035968	RC3H1	99	82.935	ENSOPRG00000013068	RC3H1	99	83.024	Ochotona_princeps
ENSMNEG00000035968	RC3H1	100	94.709	ENSODEG00000014185	RC3H1	100	94.709	Octodon_degus
ENSMNEG00000035968	RC3H1	100	91.790	ENSOANG00000000924	RC3H1	100	91.703	Ornithorhynchus_anatinus
ENSMNEG00000035968	RC3H1	99	96.150	ENSOCUG00000004930	RC3H1	98	96.150	Oryctolagus_cuniculus
ENSMNEG00000035968	RC3H1	100	90.396	ENSOGAG00000004044	RC3H1	100	90.396	Otolemur_garnettii
ENSMNEG00000035968	RC3H1	100	96.667	ENSOARG00000013011	RC3H1	100	96.667	Ovis_aries
ENSMNEG00000035968	RC3H1	100	99.295	ENSPPAG00000039253	RC3H1	100	99.295	Pan_paniscus
ENSMNEG00000035968	RC3H1	100	96.823	ENSPPRG00000009007	RC3H1	100	96.823	Panthera_pardus
ENSMNEG00000035968	RC3H1	100	97.188	ENSPTIG00000015326	RC3H1	100	97.188	Panthera_tigris_altaica
ENSMNEG00000035968	RC3H1	100	99.295	ENSPTRG00000001702	RC3H1	100	99.295	Pan_troglodytes
ENSMNEG00000035968	RC3H1	100	99.912	ENSPANG00000008886	RC3H1	100	99.912	Papio_anubis
ENSMNEG00000035968	RC3H1	100	89.045	ENSPSIG00000016181	RC3H1	100	89.308	Pelodiscus_sinensis
ENSMNEG00000035968	RC3H1	100	93.910	ENSPEMG00000011966	Rc3h1	100	93.557	Peromyscus_maniculatus_bairdii
ENSMNEG00000035968	RC3H1	70	94.430	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSMNEG00000035968	RC3H1	100	95.940	ENSPPYG00000000490	RC3H1	98	98.565	Pongo_abelii
ENSMNEG00000035968	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSMNEG00000035968	RC3H1	83	96.902	ENSPCOG00000021795	RC3H1	96	96.902	Propithecus_coquereli
ENSMNEG00000035968	RC3H1	100	87.996	ENSPVAG00000007593	RC3H1	100	87.996	Pteropus_vampyrus
ENSMNEG00000035968	RC3H1	97	61.627	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSMNEG00000035968	RC3H1	100	99.735	ENSRBIG00000037743	RC3H1	100	99.735	Rhinopithecus_bieti
ENSMNEG00000035968	RC3H1	100	99.647	ENSRROG00000036546	RC3H1	100	99.647	Rhinopithecus_roxellana
ENSMNEG00000035968	RC3H1	93	89.583	ENSSBOG00000010664	RC3H1	100	92.526	Saimiri_boliviensis_boliviensis
ENSMNEG00000035968	RC3H1	100	91.278	ENSSHAG00000007589	RC3H1	100	91.366	Sarcophilus_harrisii
ENSMNEG00000035968	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSMNEG00000035968	RC3H1	100	84.588	ENSSPUG00000018472	RC3H1	100	84.049	Sphenodon_punctatus
ENSMNEG00000035968	RC3H1	100	97.529	ENSSSCG00000015498	RC3H1	100	97.529	Sus_scrofa
ENSMNEG00000035968	RC3H1	100	87.719	ENSTGUG00000004090	RC3H1	100	87.719	Taeniopygia_guttata
ENSMNEG00000035968	RC3H1	89	97.561	ENSTBEG00000005015	RC3H1	89	97.561	Tupaia_belangeri
ENSMNEG00000035968	RC3H1	100	96.740	ENSTTRG00000008572	RC3H1	100	96.740	Tursiops_truncatus
ENSMNEG00000035968	RC3H1	100	96.470	ENSUAMG00000019525	RC3H1	100	96.470	Ursus_americanus
ENSMNEG00000035968	RC3H1	100	97.002	ENSUMAG00000020087	RC3H1	100	97.002	Ursus_maritimus
ENSMNEG00000035968	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSMNEG00000035968	RC3H1	100	96.834	ENSVVUG00000014201	RC3H1	100	96.834	Vulpes_vulpes
ENSMNEG00000035968	RC3H1	100	79.112	ENSXETG00000020030	rc3h1	100	78.659	Xenopus_tropicalis