EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000037229 (Gene tree)
Gene ID: 105487237
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 25750 bases
Position: chrKQ004995.1:2011372-2037121
Accession: 105487237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000027636	PRP21_like_P	PF12230.8	1.8e-51	1	1
ENSMNEP00000027649	PRP21_like_P	PF12230.8	2e-51	1	1
ENSMNEP00000027636	Surp	PF01805.20	1.1e-45	1	2
ENSMNEP00000027636	Surp	PF01805.20	1.1e-45	2	2
ENSMNEP00000027649	Surp	PF01805.20	1.3e-45	1	2
ENSMNEP00000027649	Surp	PF01805.20	1.3e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000051942	SF3A1-202	6953	-	ENSMNEP00000027649	828 (aa)	-	A0A2K6CVF1
ENSMNET00000051929	SF3A1-201	6220	XM_011750620	ENSMNEP00000027636	793 (aa)	XP_011748922	A0A2K6CVF7

Gene Model

Click here to download ENSMNEG00000037229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000037229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000037229	SF3A1	100	99.496	ENSG00000099995	SF3A1	100	99.496	Homo_sapiens
ENSMNEG00000037229	SF3A1	100	83.145	ENSAPOG00000020465	sf3a1	99	84.783	Acanthochromis_polyacanthus
ENSMNEG00000037229	SF3A1	100	98.113	ENSAMEG00000007737	SF3A1	100	98.113	Ailuropoda_melanoleuca
ENSMNEG00000037229	SF3A1	100	84.528	ENSACIG00000020672	sf3a1	98	85.938	Amphilophus_citrinellus
ENSMNEG00000037229	SF3A1	100	82.875	ENSAOCG00000003060	sf3a1	99	84.783	Amphiprion_ocellaris
ENSMNEG00000037229	SF3A1	100	83.000	ENSAPEG00000010735	sf3a1	99	84.910	Amphiprion_percula
ENSMNEG00000037229	SF3A1	97	85.696	ENSATEG00000021201	sf3a1	97	84.884	Anabas_testudineus
ENSMNEG00000037229	SF3A1	95	94.188	ENSAPLG00000009057	SF3A1	99	93.419	Anas_platyrhynchos
ENSMNEG00000037229	SF3A1	100	85.714	ENSACAG00000009415	SF3A1	100	85.172	Anolis_carolinensis
ENSMNEG00000037229	SF3A1	100	99.117	ENSANAG00000032045	SF3A1	100	99.117	Aotus_nancymaae
ENSMNEG00000037229	SF3A1	100	84.383	ENSACLG00000012622	sf3a1	98	86.180	Astatotilapia_calliptera
ENSMNEG00000037229	SF3A1	99	83.186	ENSAMXG00000005382	sf3a1	99	84.062	Astyanax_mexicanus
ENSMNEG00000037229	SF3A1	100	98.865	ENSBTAG00000003390	SF3A1	100	98.865	Bos_taurus
ENSMNEG00000037229	SF3A1	84	43.447	WBGene00004188	prp-21	94	43.502	Caenorhabditis_elegans
ENSMNEG00000037229	SF3A1	100	99.243	ENSCJAG00000010370	SF3A1	100	99.243	Callithrix_jacchus
ENSMNEG00000037229	SF3A1	100	98.613	ENSCAFG00000012559	SF3A1	100	98.613	Canis_familiaris
ENSMNEG00000037229	SF3A1	100	98.613	ENSCAFG00020000838	SF3A1	100	98.613	Canis_lupus_dingo
ENSMNEG00000037229	SF3A1	100	98.739	ENSCHIG00000018642	SF3A1	100	98.739	Capra_hircus
ENSMNEG00000037229	SF3A1	100	98.865	ENSTSYG00000004739	SF3A1	100	98.865	Carlito_syrichta
ENSMNEG00000037229	SF3A1	94	80.774	ENSCAPG00000015414	SF3A1	98	80.774	Cavia_aperea
ENSMNEG00000037229	SF3A1	100	98.487	ENSCPOG00000014589	SF3A1	100	98.487	Cavia_porcellus
ENSMNEG00000037229	SF3A1	100	99.117	ENSCCAG00000032006	SF3A1	100	99.117	Cebus_capucinus
ENSMNEG00000037229	SF3A1	100	99.622	ENSCATG00000029241	SF3A1	100	99.622	Cercocebus_atys
ENSMNEG00000037229	SF3A1	100	98.361	ENSCLAG00000006508	SF3A1	100	98.361	Chinchilla_lanigera
ENSMNEG00000037229	SF3A1	100	99.748	ENSCSAG00000009470	SF3A1	100	99.748	Chlorocebus_sabaeus
ENSMNEG00000037229	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSMNEG00000037229	SF3A1	100	91.058	ENSCPBG00000007595	SF3A1	100	91.184	Chrysemys_picta_bellii
ENSMNEG00000037229	SF3A1	94	52.513	ENSCING00000008526	-	66	58.254	Ciona_intestinalis
ENSMNEG00000037229	SF3A1	96	51.613	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSMNEG00000037229	SF3A1	100	99.748	ENSCANG00000033564	SF3A1	100	99.748	Colobus_angolensis_palliatus
ENSMNEG00000037229	SF3A1	100	98.235	ENSCGRG00001008933	Sf3a1	100	98.235	Cricetulus_griseus_chok1gshd
ENSMNEG00000037229	SF3A1	100	98.235	ENSCGRG00000006127	Sf3a1	100	98.235	Cricetulus_griseus_crigri
ENSMNEG00000037229	SF3A1	100	81.784	ENSCSEG00000010792	sf3a1	99	82.179	Cynoglossus_semilaevis
ENSMNEG00000037229	SF3A1	100	83.145	ENSCVAG00000004560	sf3a1	98	84.375	Cyprinodon_variegatus
ENSMNEG00000037229	SF3A1	100	82.538	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSMNEG00000037229	SF3A1	100	98.491	ENSDNOG00000010629	SF3A1	100	98.491	Dasypus_novemcinctus
ENSMNEG00000037229	SF3A1	100	98.739	ENSDORG00000005613	Sf3a1	100	98.739	Dipodomys_ordii
ENSMNEG00000037229	SF3A1	84	60.211	FBgn0266917	Sf3a1	85	59.571	Drosophila_melanogaster
ENSMNEG00000037229	SF3A1	84	96.707	ENSETEG00000017194	SF3A1	100	94.587	Echinops_telfairi
ENSMNEG00000037229	SF3A1	98	66.344	ENSEBUG00000001285	sf3a1	96	66.914	Eptatretus_burgeri
ENSMNEG00000037229	SF3A1	100	98.991	ENSEASG00005010254	SF3A1	100	98.991	Equus_asinus_asinus
ENSMNEG00000037229	SF3A1	100	98.991	ENSECAG00000023962	SF3A1	100	98.991	Equus_caballus
ENSMNEG00000037229	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSMNEG00000037229	SF3A1	100	82.331	ENSELUG00000022578	sf3a1	98	83.205	Esox_lucius
ENSMNEG00000037229	SF3A1	100	98.613	ENSFCAG00000011932	SF3A1	100	98.613	Felis_catus
ENSMNEG00000037229	SF3A1	95	93.254	ENSFALG00000006944	SF3A1	100	91.940	Ficedula_albicollis
ENSMNEG00000037229	SF3A1	100	98.739	ENSFDAG00000009560	SF3A1	100	98.739	Fukomys_damarensis
ENSMNEG00000037229	SF3A1	100	84.277	ENSFHEG00000010866	sf3a1	98	85.547	Fundulus_heteroclitus
ENSMNEG00000037229	SF3A1	100	81.486	ENSGMOG00000016024	sf3a1	99	80.740	Gadus_morhua
ENSMNEG00000037229	SF3A1	95	94.180	ENSGALG00000007937	SF3A1	100	92.443	Gallus_gallus
ENSMNEG00000037229	SF3A1	100	83.270	ENSGAFG00000009111	sf3a1	99	83.525	Gambusia_affinis
ENSMNEG00000037229	SF3A1	100	82.872	ENSGACG00000011893	sf3a1	97	83.901	Gasterosteus_aculeatus
ENSMNEG00000037229	SF3A1	96	90.933	ENSGAGG00000000762	SF3A1	99	91.064	Gopherus_agassizii
ENSMNEG00000037229	SF3A1	100	99.496	ENSGGOG00000012631	SF3A1	100	99.496	Gorilla_gorilla
ENSMNEG00000037229	SF3A1	100	84.383	ENSHBUG00000015795	sf3a1	98	86.180	Haplochromis_burtoni
ENSMNEG00000037229	SF3A1	100	98.739	ENSHGLG00000007907	SF3A1	100	98.739	Heterocephalus_glaber_female
ENSMNEG00000037229	SF3A1	100	98.739	ENSHGLG00100013799	SF3A1	100	98.739	Heterocephalus_glaber_male
ENSMNEG00000037229	SF3A1	100	80.000	ENSHCOG00000015423	sf3a1	99	80.516	Hippocampus_comes
ENSMNEG00000037229	SF3A1	96	82.682	ENSIPUG00000002470	sf3a1	98	82.943	Ictalurus_punctatus
ENSMNEG00000037229	SF3A1	100	98.865	ENSSTOG00000013892	SF3A1	100	98.865	Ictidomys_tridecemlineatus
ENSMNEG00000037229	SF3A1	100	98.615	ENSJJAG00000022566	Sf3a1	100	98.615	Jaculus_jaculus
ENSMNEG00000037229	SF3A1	100	82.893	ENSKMAG00000002400	sf3a1	98	84.896	Kryptolebias_marmoratus
ENSMNEG00000037229	SF3A1	100	82.893	ENSLBEG00000022974	sf3a1	99	83.484	Labrus_bergylta
ENSMNEG00000037229	SF3A1	100	86.826	ENSLACG00000003565	SF3A1	97	88.281	Latimeria_chalumnae
ENSMNEG00000037229	SF3A1	100	85.088	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSMNEG00000037229	SF3A1	98	62.166	ENSLAFG00000026032	-	98	61.656	Loxodonta_africana
ENSMNEG00000037229	SF3A1	100	98.865	ENSLAFG00000000448	SF3A1	100	98.865	Loxodonta_africana
ENSMNEG00000037229	SF3A1	100	99.874	ENSMFAG00000031979	SF3A1	100	99.874	Macaca_fascicularis
ENSMNEG00000037229	SF3A1	100	99.874	ENSMMUG00000005547	SF3A1	100	99.874	Macaca_mulatta
ENSMNEG00000037229	SF3A1	100	99.748	ENSMLEG00000041908	SF3A1	100	99.748	Mandrillus_leucophaeus
ENSMNEG00000037229	SF3A1	97	85.382	ENSMAMG00000006460	sf3a1	97	85.511	Mastacembelus_armatus
ENSMNEG00000037229	SF3A1	100	84.383	ENSMZEG00005009633	sf3a1	98	86.180	Maylandia_zebra
ENSMNEG00000037229	SF3A1	95	94.180	ENSMGAG00000001330	SF3A1	99	93.411	Meleagris_gallopavo
ENSMNEG00000037229	SF3A1	92	94.809	ENSMAUG00000020317	Sf3a1	94	94.809	Mesocricetus_auratus
ENSMNEG00000037229	SF3A1	100	99.117	ENSMICG00000010038	SF3A1	100	99.117	Microcebus_murinus
ENSMNEG00000037229	SF3A1	100	98.361	ENSMOCG00000008438	Sf3a1	100	98.361	Microtus_ochrogaster
ENSMNEG00000037229	SF3A1	100	81.635	ENSMMOG00000015588	sf3a1	98	82.239	Mola_mola
ENSMNEG00000037229	SF3A1	100	97.478	ENSMODG00000009270	SF3A1	100	97.478	Monodelphis_domestica
ENSMNEG00000037229	SF3A1	100	84.509	ENSMALG00000000148	sf3a1	99	86.104	Monopterus_albus
ENSMNEG00000037229	SF3A1	100	98.108	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.108	Mus_caroli
ENSMNEG00000037229	SF3A1	100	98.108	ENSMUSG00000002129	Sf3a1	100	98.108	Mus_musculus
ENSMNEG00000037229	SF3A1	100	97.856	MGP_PahariEiJ_G0016862	Sf3a1	100	97.856	Mus_pahari
ENSMNEG00000037229	SF3A1	100	98.108	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.108	Mus_spretus
ENSMNEG00000037229	SF3A1	100	98.613	ENSMPUG00000013144	SF3A1	100	98.613	Mustela_putorius_furo
ENSMNEG00000037229	SF3A1	100	98.739	ENSMLUG00000002139	SF3A1	100	98.739	Myotis_lucifugus
ENSMNEG00000037229	SF3A1	100	98.613	ENSNGAG00000016977	Sf3a1	100	98.613	Nannospalax_galili
ENSMNEG00000037229	SF3A1	100	84.635	ENSNBRG00000016642	sf3a1	96	86.825	Neolamprologus_brichardi
ENSMNEG00000037229	SF3A1	100	99.748	ENSNLEG00000003686	SF3A1	100	99.748	Nomascus_leucogenys
ENSMNEG00000037229	SF3A1	96	87.632	ENSMEUG00000008741	SF3A1	100	87.632	Notamacropus_eugenii
ENSMNEG00000037229	SF3A1	100	98.235	ENSOPRG00000016636	SF3A1	100	98.235	Ochotona_princeps
ENSMNEG00000037229	SF3A1	100	98.739	ENSODEG00000002571	SF3A1	100	98.739	Octodon_degus
ENSMNEG00000037229	SF3A1	100	84.105	ENSONIG00000010848	sf3a1	98	85.547	Oreochromis_niloticus
ENSMNEG00000037229	SF3A1	100	98.361	ENSOCUG00000007633	SF3A1	100	98.361	Oryctolagus_cuniculus
ENSMNEG00000037229	SF3A1	96	82.021	ENSORLG00000013050	sf3a1	99	83.578	Oryzias_latipes
ENSMNEG00000037229	SF3A1	99	80.380	ENSORLG00020003236	sf3a1	94	83.712	Oryzias_latipes_hni
ENSMNEG00000037229	SF3A1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSMNEG00000037229	SF3A1	100	82.767	ENSOMEG00000013362	sf3a1	99	83.613	Oryzias_melastigma
ENSMNEG00000037229	SF3A1	100	98.991	ENSOGAG00000012931	SF3A1	100	98.991	Otolemur_garnettii
ENSMNEG00000037229	SF3A1	100	96.974	ENSOARG00000006849	SF3A1	100	96.974	Ovis_aries
ENSMNEG00000037229	SF3A1	100	98.487	ENSPPAG00000041790	SF3A1	100	98.487	Pan_paniscus
ENSMNEG00000037229	SF3A1	100	98.613	ENSPPRG00000004391	SF3A1	100	98.613	Panthera_pardus
ENSMNEG00000037229	SF3A1	97	98.575	ENSPTIG00000000844	SF3A1	100	98.575	Panthera_tigris_altaica
ENSMNEG00000037229	SF3A1	100	99.496	ENSPTRG00000014240	SF3A1	100	99.496	Pan_troglodytes
ENSMNEG00000037229	SF3A1	100	99.748	ENSPANG00000020772	SF3A1	100	99.748	Papio_anubis
ENSMNEG00000037229	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSMNEG00000037229	SF3A1	96	84.424	ENSPMGG00000023096	sf3a1	100	84.424	Periophthalmus_magnuspinnatus
ENSMNEG00000037229	SF3A1	100	98.487	ENSPEMG00000009494	Sf3a1	100	98.487	Peromyscus_maniculatus_bairdii
ENSMNEG00000037229	SF3A1	69	77.677	ENSPMAG00000007139	-	90	79.065	Petromyzon_marinus
ENSMNEG00000037229	SF3A1	100	97.226	ENSPCIG00000022692	SF3A1	100	97.226	Phascolarctos_cinereus
ENSMNEG00000037229	SF3A1	100	75.377	ENSPFOG00000016768	sf3a1	93	79.048	Poecilia_formosa
ENSMNEG00000037229	SF3A1	100	83.648	ENSPLAG00000017268	sf3a1	97	85.229	Poecilia_latipinna
ENSMNEG00000037229	SF3A1	84	86.145	ENSPMEG00000019811	sf3a1	98	85.392	Poecilia_mexicana
ENSMNEG00000037229	SF3A1	100	83.774	ENSPREG00000010347	sf3a1	97	85.621	Poecilia_reticulata
ENSMNEG00000037229	SF3A1	100	99.748	ENSPPYG00000011707	SF3A1	100	99.748	Pongo_abelii
ENSMNEG00000037229	SF3A1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSMNEG00000037229	SF3A1	100	99.117	ENSPCOG00000026630	SF3A1	100	99.117	Propithecus_coquereli
ENSMNEG00000037229	SF3A1	100	94.451	ENSPVAG00000017719	SF3A1	94	97.852	Pteropus_vampyrus
ENSMNEG00000037229	SF3A1	100	84.383	ENSPNYG00000018706	sf3a1	98	86.180	Pundamilia_nyererei
ENSMNEG00000037229	SF3A1	98	83.842	ENSPNAG00000003721	sf3a1	98	85.046	Pygocentrus_nattereri
ENSMNEG00000037229	SF3A1	100	97.982	ENSRNOG00000005218	Sf3a1	100	97.982	Rattus_norvegicus
ENSMNEG00000037229	SF3A1	100	99.638	ENSRBIG00000032167	SF3A1	100	99.638	Rhinopithecus_bieti
ENSMNEG00000037229	SF3A1	100	99.622	ENSRROG00000044908	SF3A1	100	99.622	Rhinopithecus_roxellana
ENSMNEG00000037229	SF3A1	97	94.961	ENSSBOG00000021960	SF3A1	100	99.114	Saimiri_boliviensis_boliviensis
ENSMNEG00000037229	SF3A1	99	93.165	ENSSHAG00000003666	SF3A1	98	94.825	Sarcophilus_harrisii
ENSMNEG00000037229	SF3A1	100	83.250	ENSSFOG00015004579	sf3a1	99	85.000	Scleropages_formosus
ENSMNEG00000037229	SF3A1	100	81.761	ENSSMAG00000004275	sf3a1	99	82.005	Scophthalmus_maximus
ENSMNEG00000037229	SF3A1	100	83.625	ENSSDUG00000022219	sf3a1	99	84.527	Seriola_dumerili
ENSMNEG00000037229	SF3A1	100	83.625	ENSSLDG00000012642	sf3a1	99	84.527	Seriola_lalandi_dorsalis
ENSMNEG00000037229	SF3A1	97	95.337	ENSSARG00000005960	SF3A1	100	95.337	Sorex_araneus
ENSMNEG00000037229	SF3A1	96	92.098	ENSSPUG00000018863	SF3A1	100	91.667	Sphenodon_punctatus
ENSMNEG00000037229	SF3A1	100	84.654	ENSSPAG00000011856	sf3a1	99	85.038	Stegastes_partitus
ENSMNEG00000037229	SF3A1	100	98.739	ENSSSCG00000010002	SF3A1	100	98.739	Sus_scrofa
ENSMNEG00000037229	SF3A1	95	94.195	ENSTGUG00000010547	SF3A1	99	93.645	Taeniopygia_guttata
ENSMNEG00000037229	SF3A1	100	81.384	ENSTRUG00000006118	sf3a1	97	82.222	Takifugu_rubripes
ENSMNEG00000037229	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSMNEG00000037229	SF3A1	100	91.551	ENSTBEG00000012771	SF3A1	92	100.000	Tupaia_belangeri
ENSMNEG00000037229	SF3A1	100	98.489	ENSTTRG00000001535	SF3A1	100	98.489	Tursiops_truncatus
ENSMNEG00000037229	SF3A1	99	97.840	ENSUAMG00000006750	SF3A1	99	97.840	Ursus_americanus
ENSMNEG00000037229	SF3A1	99	97.832	ENSUMAG00000016665	SF3A1	99	97.832	Ursus_maritimus
ENSMNEG00000037229	SF3A1	100	98.613	ENSVVUG00000003075	SF3A1	100	98.613	Vulpes_vulpes
ENSMNEG00000037229	SF3A1	100	85.571	ENSXETG00000016144	sf3a1	100	85.320	Xenopus_tropicalis
ENSMNEG00000037229	SF3A1	100	83.019	ENSXCOG00000015653	sf3a1	99	83.269	Xiphophorus_couchianus
ENSMNEG00000037229	SF3A1	100	83.145	ENSXMAG00000002753	sf3a1	99	83.397	Xiphophorus_maculatus