EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000037901 (Gene tree)
Gene ID: 105469532
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 16959 bases
Position: chrKQ007745.1:3385334-3402292
Accession: 105469532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000029715	KH_1	PF00013.29	2.2e-07	1	1
ENSMNEP00000029672	KH_1	PF00013.29	3.1e-07	1	1
ENSMNEP00000029646	KH_1	PF00013.29	4.3e-07	1	1
ENSMNEP00000029601	KH_1	PF00013.29	4.3e-07	1	1
ENSMNEP00000029629	KH_1	PF00013.29	4.6e-07	1	1
ENSMNEP00000029679	KH_1	PF00013.29	4.7e-07	1	1
ENSMNEP00000029715	zf-CCHC	PF00098.23	0.0002	1	1
ENSMNEP00000029672	zf-CCHC	PF00098.23	0.00021	1	1
ENSMNEP00000029646	zf-CCHC	PF00098.23	0.00027	1	1
ENSMNEP00000029601	zf-CCHC	PF00098.23	0.00029	1	1
ENSMNEP00000029679	zf-CCHC	PF00098.23	0.0003	1	1
ENSMNEP00000029629	zf-CCHC	PF00098.23	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000054083	SF1-204	1518	-	ENSMNEP00000029672	505 (aa)	-	A0A2K6D178
ENSMNET00000054091	SF1-205	1998	-	ENSMNEP00000029679	665 (aa)	-	A0A2K6D191
ENSMNET00000054128	SF1-206	1257	-	ENSMNEP00000029715	418 (aa)	-	A0A2K6D1D1
ENSMNET00000054009	SF1-201	3704	XM_011720687	ENSMNEP00000029601	639 (aa)	XP_011718989	A0A2K6D116
ENSMNET00000054057	SF1-203	1824	-	ENSMNEP00000029646	607 (aa)	-	A0A2K6D160
ENSMNET00000054039	SF1-202	1977	-	ENSMNEP00000029629	658 (aa)	-	A0A2K6D142

Gene Model

Click here to download ENSMNEG00000037901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000037901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000037901	SF1	90	80.928	ENSAPOG00000012341	sf1	57	79.146	Acanthochromis_polyacanthus
ENSMNEG00000037901	SF1	89	99.730	ENSAMEG00000017828	SF1	100	94.216	Ailuropoda_melanoleuca
ENSMNEG00000037901	SF1	89	82.713	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSMNEG00000037901	SF1	90	80.412	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSMNEG00000037901	SF1	90	80.412	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSMNEG00000037901	SF1	89	81.579	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSMNEG00000037901	SF1	100	99.844	ENSANAG00000026664	-	100	99.844	Aotus_nancymaae
ENSMNEG00000037901	SF1	96	87.255	ENSANAG00000022607	-	99	87.562	Aotus_nancymaae
ENSMNEG00000037901	SF1	88	84.282	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSMNEG00000037901	SF1	88	85.829	ENSAMXG00000003630	sf1	50	82.723	Astyanax_mexicanus
ENSMNEG00000037901	SF1	100	100.000	ENSBTAG00000001035	SF1	100	100.000	Bos_taurus
ENSMNEG00000037901	SF1	100	100.000	ENSCJAG00000002780	SF1	100	100.000	Callithrix_jacchus
ENSMNEG00000037901	SF1	100	95.897	ENSCAFG00000014239	SF1	100	95.897	Canis_familiaris
ENSMNEG00000037901	SF1	100	100.000	ENSCAFG00020014381	SF1	100	100.000	Canis_lupus_dingo
ENSMNEG00000037901	SF1	100	100.000	ENSCHIG00000025867	SF1	100	100.000	Capra_hircus
ENSMNEG00000037901	SF1	82	98.925	ENSTSYG00000033618	SF1	98	98.925	Carlito_syrichta
ENSMNEG00000037901	SF1	88	99.457	ENSCAPG00000010762	SF1	87	98.636	Cavia_aperea
ENSMNEG00000037901	SF1	99	95.385	ENSCPOG00000012290	SF1	100	98.708	Cavia_porcellus
ENSMNEG00000037901	SF1	99	86.091	ENSCCAG00000023781	-	93	86.091	Cebus_capucinus
ENSMNEG00000037901	SF1	100	100.000	ENSCCAG00000037881	SF1	100	100.000	Cebus_capucinus
ENSMNEG00000037901	SF1	100	100.000	ENSCATG00000011564	SF1	100	100.000	Cercocebus_atys
ENSMNEG00000037901	SF1	94	98.947	ENSCSAG00000007258	SF1	98	99.079	Chlorocebus_sabaeus
ENSMNEG00000037901	SF1	84	92.571	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSMNEG00000037901	SF1	88	92.683	ENSCPBG00000023763	SF1	66	85.135	Chrysemys_picta_bellii
ENSMNEG00000037901	SF1	73	67.093	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSMNEG00000037901	SF1	86	59.137	ENSCSAVG00000009055	-	72	63.787	Ciona_savignyi
ENSMNEG00000037901	SF1	100	100.000	ENSCANG00000042201	SF1	100	100.000	Colobus_angolensis_palliatus
ENSMNEG00000037901	SF1	100	99.531	ENSCGRG00001003677	Sf1	100	99.531	Cricetulus_griseus_chok1gshd
ENSMNEG00000037901	SF1	94	98.105	ENSCGRG00000001708	Sf1	99	98.162	Cricetulus_griseus_crigri
ENSMNEG00000037901	SF1	89	80.628	ENSCSEG00000014375	sf1	58	76.359	Cynoglossus_semilaevis
ENSMNEG00000037901	SF1	89	84.324	ENSCVAG00000001670	sf1	63	79.167	Cyprinodon_variegatus
ENSMNEG00000037901	SF1	91	82.474	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSMNEG00000037901	SF1	94	98.526	ENSDNOG00000001282	SF1	98	98.527	Dasypus_novemcinctus
ENSMNEG00000037901	SF1	100	100.000	ENSDORG00000016334	Sf1	100	100.000	Dipodomys_ordii
ENSMNEG00000037901	SF1	92	92.479	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSMNEG00000037901	SF1	94	98.526	ENSEASG00005018272	SF1	98	98.711	Equus_asinus_asinus
ENSMNEG00000037901	SF1	94	98.737	ENSECAG00000024544	SF1	98	98.895	Equus_caballus
ENSMNEG00000037901	SF1	78	99.077	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSMNEG00000037901	SF1	88	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSMNEG00000037901	SF1	100	95.897	ENSFCAG00000012231	SF1	100	95.897	Felis_catus
ENSMNEG00000037901	SF1	98	94.127	ENSFDAG00000009833	SF1	99	94.127	Fukomys_damarensis
ENSMNEG00000037901	SF1	91	80.155	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSMNEG00000037901	SF1	79	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSMNEG00000037901	SF1	91	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSMNEG00000037901	SF1	92	80.000	ENSGACG00000000826	sf1	67	78.947	Gasterosteus_aculeatus
ENSMNEG00000037901	SF1	88	92.683	ENSGAGG00000021691	SF1	72	85.135	Gopherus_agassizii
ENSMNEG00000037901	SF1	89	82.895	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSMNEG00000037901	SF1	100	95.745	ENSHGLG00000009541	SF1	100	95.745	Heterocephalus_glaber_female
ENSMNEG00000037901	SF1	88	100.000	ENSHGLG00100013879	-	92	97.154	Heterocephalus_glaber_male
ENSMNEG00000037901	SF1	77	88.974	ENSHGLG00100008076	-	87	87.067	Heterocephalus_glaber_male
ENSMNEG00000037901	SF1	91	89.005	ENSHGLG00100008255	-	94	86.555	Heterocephalus_glaber_male
ENSMNEG00000037901	SF1	89	80.628	ENSHCOG00000011388	sf1	58	76.942	Hippocampus_comes
ENSMNEG00000037901	SF1	98	100.000	ENSSTOG00000009790	-	100	100.000	Ictidomys_tridecemlineatus
ENSMNEG00000037901	SF1	89	93.973	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSMNEG00000037901	SF1	100	99.844	ENSJJAG00000011788	Sf1	100	99.844	Jaculus_jaculus
ENSMNEG00000037901	SF1	91	81.841	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSMNEG00000037901	SF1	89	82.199	ENSLBEG00000019836	sf1	64	78.230	Labrus_bergylta
ENSMNEG00000037901	SF1	90	81.053	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSMNEG00000037901	SF1	88	85.294	ENSLOCG00000002130	sf1	59	82.552	Lepisosteus_oculatus
ENSMNEG00000037901	SF1	99	97.385	ENSLAFG00000007201	SF1	100	97.385	Loxodonta_africana
ENSMNEG00000037901	SF1	100	100.000	ENSMFAG00000033122	SF1	100	100.000	Macaca_fascicularis
ENSMNEG00000037901	SF1	99	100.000	ENSMMUG00000022606	SF1	100	100.000	Macaca_mulatta
ENSMNEG00000037901	SF1	99	100.000	ENSMLEG00000040706	SF1	99	100.000	Mandrillus_leucophaeus
ENSMNEG00000037901	SF1	90	80.928	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSMNEG00000037901	SF1	89	82.632	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSMNEG00000037901	SF1	100	95.137	ENSMAUG00000014064	Sf1	100	95.137	Mesocricetus_auratus
ENSMNEG00000037901	SF1	100	99.844	ENSMICG00000001202	SF1	100	99.844	Microcebus_murinus
ENSMNEG00000037901	SF1	100	95.137	ENSMOCG00000022038	Sf1	100	95.137	Microtus_ochrogaster
ENSMNEG00000037901	SF1	88	81.720	ENSMMOG00000020474	sf1	60	76.456	Mola_mola
ENSMNEG00000037901	SF1	89	98.391	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSMNEG00000037901	SF1	89	82.888	ENSMALG00000020521	sf1	68	76.611	Monopterus_albus
ENSMNEG00000037901	SF1	100	99.374	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSMNEG00000037901	SF1	100	99.374	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSMNEG00000037901	SF1	100	99.374	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSMNEG00000037901	SF1	100	99.374	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSMNEG00000037901	SF1	100	98.748	ENSMPUG00000012684	SF1	100	98.748	Mustela_putorius_furo
ENSMNEG00000037901	SF1	91	95.288	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSMNEG00000037901	SF1	99	99.683	ENSMLUG00000015217	-	99	99.683	Myotis_lucifugus
ENSMNEG00000037901	SF1	100	95.593	ENSNGAG00000005550	Sf1	100	95.593	Nannospalax_galili
ENSMNEG00000037901	SF1	88	84.282	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSMNEG00000037901	SF1	100	99.844	ENSNLEG00000005236	-	100	99.844	Nomascus_leucogenys
ENSMNEG00000037901	SF1	94	97.474	ENSMEUG00000013424	SF1	100	97.575	Notamacropus_eugenii
ENSMNEG00000037901	SF1	94	98.319	ENSOPRG00000005008	SF1	100	98.400	Ochotona_princeps
ENSMNEG00000037901	SF1	100	92.705	ENSODEG00000006102	-	100	92.705	Octodon_degus
ENSMNEG00000037901	SF1	89	82.895	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSMNEG00000037901	SF1	78	88.608	ENSOANG00000002909	SF1	97	87.817	Ornithorhynchus_anatinus
ENSMNEG00000037901	SF1	99	95.692	ENSOCUG00000026486	SF1	100	95.692	Oryctolagus_cuniculus
ENSMNEG00000037901	SF1	89	81.102	ENSORLG00000011853	sf1	58	76.739	Oryzias_latipes
ENSMNEG00000037901	SF1	91	79.744	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSMNEG00000037901	SF1	89	80.577	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSMNEG00000037901	SF1	91	80.256	ENSOMEG00000005210	sf1	60	77.458	Oryzias_melastigma
ENSMNEG00000037901	SF1	100	96.049	ENSOGAG00000016196	SF1	100	96.049	Otolemur_garnettii
ENSMNEG00000037901	SF1	91	100.000	ENSOARG00000009166	SF1	99	92.807	Ovis_aries
ENSMNEG00000037901	SF1	99	99.272	ENSPPAG00000002799	-	100	100.000	Pan_paniscus
ENSMNEG00000037901	SF1	96	100.000	ENSPPRG00000013566	SF1	100	100.000	Panthera_pardus
ENSMNEG00000037901	SF1	90	99.200	ENSPTIG00000016141	SF1	92	100.000	Panthera_tigris_altaica
ENSMNEG00000037901	SF1	100	99.761	ENSPTRG00000003846	SF1	100	99.761	Pan_troglodytes
ENSMNEG00000037901	SF1	100	100.000	ENSPANG00000020754	SF1	100	100.000	Papio_anubis
ENSMNEG00000037901	SF1	76	78.834	ENSPKIG00000012116	sf1	89	73.775	Paramormyrops_kingsleyae
ENSMNEG00000037901	SF1	69	87.179	ENSPSIG00000003610	SF1	97	75.490	Pelodiscus_sinensis
ENSMNEG00000037901	SF1	100	96.212	ENSPEMG00000010463	Sf1	100	96.212	Peromyscus_maniculatus_bairdii
ENSMNEG00000037901	SF1	80	72.107	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSMNEG00000037901	SF1	100	98.905	ENSPCIG00000018173	SF1	100	98.905	Phascolarctos_cinereus
ENSMNEG00000037901	SF1	91	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSMNEG00000037901	SF1	88	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSMNEG00000037901	SF1	88	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSMNEG00000037901	SF1	90	82.292	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSMNEG00000037901	SF1	100	95.745	ENSPPYG00000003098	-	99	99.811	Pongo_abelii
ENSMNEG00000037901	SF1	94	98.316	ENSPCAG00000013631	SF1	80	98.343	Procavia_capensis
ENSMNEG00000037901	SF1	100	99.844	ENSPCOG00000027546	SF1	100	99.844	Propithecus_coquereli
ENSMNEG00000037901	SF1	94	98.526	ENSPVAG00000016938	SF1	83	97.297	Pteropus_vampyrus
ENSMNEG00000037901	SF1	89	82.632	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSMNEG00000037901	SF1	89	85.185	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSMNEG00000037901	SF1	100	99.374	ENSRNOG00000021085	Sf1	100	99.374	Rattus_norvegicus
ENSMNEG00000037901	SF1	100	97.883	ENSRBIG00000042818	SF1	100	97.883	Rhinopithecus_bieti
ENSMNEG00000037901	SF1	100	98.086	ENSRROG00000045655	SF1	100	99.051	Rhinopithecus_roxellana
ENSMNEG00000037901	SF1	70	43.182	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSMNEG00000037901	SF1	99	80.815	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSMNEG00000037901	SF1	90	91.906	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSMNEG00000037901	SF1	91	81.137	ENSSFOG00015021978	sf1	58	77.859	Scleropages_formosus
ENSMNEG00000037901	SF1	89	79.896	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSMNEG00000037901	SF1	90	80.206	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSMNEG00000037901	SF1	90	80.206	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSMNEG00000037901	SF1	90	96.923	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSMNEG00000037901	SF1	85	92.416	ENSSPUG00000012907	SF1	86	81.226	Sphenodon_punctatus
ENSMNEG00000037901	SF1	90	80.670	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSMNEG00000037901	SF1	100	99.844	ENSSSCG00000013021	SF1	100	99.844	Sus_scrofa
ENSMNEG00000037901	SF1	92	72.265	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSMNEG00000037901	SF1	96	84.804	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSMNEG00000037901	SF1	93	94.444	ENSTTRG00000008857	SF1	100	94.834	Tursiops_truncatus
ENSMNEG00000037901	SF1	82	97.137	ENSUAMG00000011977	SF1	100	97.137	Ursus_americanus
ENSMNEG00000037901	SF1	89	100.000	ENSUMAG00000007268	SF1	95	98.864	Ursus_maritimus
ENSMNEG00000037901	SF1	65	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSMNEG00000037901	SF1	94	98.947	ENSVVUG00000028585	SF1	98	99.079	Vulpes_vulpes
ENSMNEG00000037901	SF1	94	82.663	ENSXETG00000008434	sf1	66	83.805	Xenopus_tropicalis
ENSMNEG00000037901	SF1	87	84.932	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSMNEG00000037901	SF1	89	83.113	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus