EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000038822 (Gene tree)
Gene ID: 105489402
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 14644 bases
Position: chrKQ005180.1:3345233-3359876
Accession: 105489402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000031063	MBD	PF01429.19	3.8e-16	1	1
ENSMNEP00000031069	MBD	PF01429.19	4.2e-16	1	1
ENSMNEP00000031051	MBD	PF01429.19	4.2e-16	1	1
ENSMNEP00000031073	MBD	PF01429.19	4.3e-16	1	1
ENSMNEP00000031067	MBD	PF01429.19	4.4e-16	1	1
ENSMNEP00000030831	MBD	PF01429.19	4.5e-16	1	1
ENSMNEP00000031057	MBD	PF01429.19	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000055254	MBD1-201	1704	XM_011754188	ENSMNEP00000030831	567 (aa)	XP_011752490	A0A2K6D4K1
ENSMNET00000055486	MBD1-204	5034	XM_011754182	ENSMNEP00000031063	574 (aa)	XP_011752484	A0A2K6D559
ENSMNET00000055496	MBD1-207	3475	XM_011754209	ENSMNEP00000031073	550 (aa)	XP_011752511	A0A2K6D569
ENSMNET00000055490	MBD1-205	4980	XM_011754200	ENSMNEP00000031067	556 (aa)	XP_011752502	A0A2K6D558
ENSMNET00000055480	MBD1-203	5127	XM_011754172	ENSMNEP00000031057	605 (aa)	XP_011752474	A0A2K6D550
ENSMNET00000055492	MBD1-206	4920	XM_011754191	ENSMNEP00000031069	536 (aa)	XP_011752493	A0A2K6D582
ENSMNET00000055474	MBD1-202	5202	XM_011754166	ENSMNEP00000031051	630 (aa)	XP_011752468	A0A2K6D5A2

Gene Model

Click here to download ENSMNEG00000038822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000038822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000038822	MBD1	100	99.365	ENSG00000141644	MBD1	100	99.365	Homo_sapiens
ENSMNEG00000038822	MBD1	100	87.500	ENSAMEG00000000238	MBD1	96	87.975	Ailuropoda_melanoleuca
ENSMNEG00000038822	MBD1	69	45.297	ENSACAG00000006091	-	100	45.278	Anolis_carolinensis
ENSMNEG00000038822	MBD1	100	96.190	ENSANAG00000036253	MBD1	100	96.190	Aotus_nancymaae
ENSMNEG00000038822	MBD1	100	86.529	ENSBTAG00000003801	MBD1	100	87.322	Bos_taurus
ENSMNEG00000038822	MBD1	100	94.860	ENSCJAG00000004959	MBD1	100	95.247	Callithrix_jacchus
ENSMNEG00000038822	MBD1	100	86.529	ENSCAFG00000018928	MBD1	96	87.322	Canis_familiaris
ENSMNEG00000038822	MBD1	99	85.875	ENSCAFG00020024272	MBD1	97	86.677	Canis_lupus_dingo
ENSMNEG00000038822	MBD1	100	86.529	ENSCHIG00000021134	MBD1	100	87.322	Capra_hircus
ENSMNEG00000038822	MBD1	100	90.794	ENSTSYG00000000509	MBD1	100	90.794	Carlito_syrichta
ENSMNEG00000038822	MBD1	99	69.258	ENSCAPG00000015782	MBD1	96	68.421	Cavia_aperea
ENSMNEG00000038822	MBD1	100	74.124	ENSCPOG00000001671	MBD1	100	73.957	Cavia_porcellus
ENSMNEG00000038822	MBD1	100	94.165	ENSCCAG00000034600	MBD1	100	93.902	Cebus_capucinus
ENSMNEG00000038822	MBD1	100	99.524	ENSCATG00000029959	MBD1	100	99.524	Cercocebus_atys
ENSMNEG00000038822	MBD1	100	85.556	ENSCLAG00000007457	MBD1	89	85.556	Chinchilla_lanigera
ENSMNEG00000038822	MBD1	100	99.504	ENSCSAG00000018070	MBD1	100	99.504	Chlorocebus_sabaeus
ENSMNEG00000038822	MBD1	100	99.206	ENSCANG00000033425	MBD1	100	99.206	Colobus_angolensis_palliatus
ENSMNEG00000038822	MBD1	100	75.041	ENSCGRG00001014843	Mbd1	100	75.041	Cricetulus_griseus_chok1gshd
ENSMNEG00000038822	MBD1	99	63.492	ENSCGRG00000014135	Mbd1	96	63.316	Cricetulus_griseus_crigri
ENSMNEG00000038822	MBD1	100	82.726	ENSDNOG00000015998	MBD1	100	83.994	Dasypus_novemcinctus
ENSMNEG00000038822	MBD1	99	74.382	ENSDORG00000013917	Mbd1	97	78.963	Dipodomys_ordii
ENSMNEG00000038822	MBD1	100	86.392	ENSEASG00005003857	MBD1	100	87.975	Equus_asinus_asinus
ENSMNEG00000038822	MBD1	100	86.326	ENSECAG00000011497	MBD1	80	87.974	Equus_caballus
ENSMNEG00000038822	MBD1	84	50.725	ENSELUG00000004375	mbd1b	52	50.725	Esox_lucius
ENSMNEG00000038822	MBD1	100	88.133	ENSFCAG00000015730	MBD1	100	88.608	Felis_catus
ENSMNEG00000038822	MBD1	99	80.492	ENSFDAG00000011085	MBD1	96	80.480	Fukomys_damarensis
ENSMNEG00000038822	MBD1	75	31.207	ENSFHEG00000020120	mbd1b	51	31.991	Fundulus_heteroclitus
ENSMNEG00000038822	MBD1	70	30.711	ENSGACG00000012106	-	50	60.656	Gasterosteus_aculeatus
ENSMNEG00000038822	MBD1	100	99.048	ENSGGOG00000016966	MBD1	100	99.048	Gorilla_gorilla
ENSMNEG00000038822	MBD1	65	37.791	ENSHBUG00000014270	mbd1b	51	52.174	Haplochromis_burtoni
ENSMNEG00000038822	MBD1	100	85.950	ENSHGLG00000008740	MBD1	100	85.950	Heterocephalus_glaber_female
ENSMNEG00000038822	MBD1	100	81.010	ENSHGLG00100005198	MBD1	100	87.821	Heterocephalus_glaber_male
ENSMNEG00000038822	MBD1	70	36.058	ENSHCOG00000009952	mbd1b	53	36.667	Hippocampus_comes
ENSMNEG00000038822	MBD1	100	83.252	ENSSTOG00000007780	MBD1	100	83.415	Ictidomys_tridecemlineatus
ENSMNEG00000038822	MBD1	98	75.709	ENSJJAG00000022859	Mbd1	96	75.709	Jaculus_jaculus
ENSMNEG00000038822	MBD1	96	36.673	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSMNEG00000038822	MBD1	99	75.788	ENSLAFG00000031328	MBD1	97	75.788	Loxodonta_africana
ENSMNEG00000038822	MBD1	100	100.000	ENSMFAG00000026335	MBD1	100	100.000	Macaca_fascicularis
ENSMNEG00000038822	MBD1	100	100.000	ENSMMUG00000009050	MBD1	100	100.000	Macaca_mulatta
ENSMNEG00000038822	MBD1	100	99.683	ENSMLEG00000043121	MBD1	100	99.683	Mandrillus_leucophaeus
ENSMNEG00000038822	MBD1	50	81.041	ENSMAUG00000021798	-	97	81.041	Mesocricetus_auratus
ENSMNEG00000038822	MBD1	100	90.081	ENSMICG00000006414	MBD1	100	90.407	Microcebus_murinus
ENSMNEG00000038822	MBD1	51	73.852	ENSMOCG00000011976	-	100	73.852	Microtus_ochrogaster
ENSMNEG00000038822	MBD1	62	43.077	ENSMODG00000001286	-	58	43.928	Monodelphis_domestica
ENSMNEG00000038822	MBD1	53	48.485	ENSMALG00000007808	mbd1b	52	55.385	Monopterus_albus
ENSMNEG00000038822	MBD1	99	67.568	ENSMUSG00000024561	Mbd1	97	68.471	Mus_musculus
ENSMNEG00000038822	MBD1	100	68.362	MGP_PahariEiJ_G0019128	Mbd1	100	68.680	Mus_pahari
ENSMNEG00000038822	MBD1	98	68.882	MGP_SPRETEiJ_G0023304	Mbd1	99	69.643	Mus_spretus
ENSMNEG00000038822	MBD1	100	87.184	ENSMPUG00000008843	MBD1	96	87.658	Mustela_putorius_furo
ENSMNEG00000038822	MBD1	100	85.397	ENSMLUG00000008286	MBD1	96	85.397	Myotis_lucifugus
ENSMNEG00000038822	MBD1	98	73.391	ENSNGAG00000011412	Mbd1	96	73.391	Nannospalax_galili
ENSMNEG00000038822	MBD1	98	84.848	ENSNLEG00000032711	-	89	84.848	Nomascus_leucogenys
ENSMNEG00000038822	MBD1	100	98.678	ENSNLEG00000011661	-	100	98.678	Nomascus_leucogenys
ENSMNEG00000038822	MBD1	100	75.041	ENSOPRG00000007647	MBD1	100	75.041	Ochotona_princeps
ENSMNEG00000038822	MBD1	99	78.269	ENSODEG00000018451	MBD1	97	78.975	Octodon_degus
ENSMNEG00000038822	MBD1	65	36.905	ENSONIG00000020289	mbd1b	51	55.385	Oreochromis_niloticus
ENSMNEG00000038822	MBD1	92	46.328	ENSOANG00000014593	-	100	48.106	Ornithorhynchus_anatinus
ENSMNEG00000038822	MBD1	100	83.994	ENSOCUG00000006554	MBD1	100	84.469	Oryctolagus_cuniculus
ENSMNEG00000038822	MBD1	63	31.527	ENSOMEG00000023660	mbd1b	53	56.923	Oryzias_melastigma
ENSMNEG00000038822	MBD1	100	87.500	ENSOGAG00000003784	MBD1	96	87.500	Otolemur_garnettii
ENSMNEG00000038822	MBD1	100	86.234	ENSOARG00000004218	MBD1	95	87.025	Ovis_aries
ENSMNEG00000038822	MBD1	100	99.174	ENSPPAG00000038886	MBD1	100	99.174	Pan_paniscus
ENSMNEG00000038822	MBD1	100	88.303	ENSPPRG00000021387	MBD1	100	88.797	Panthera_pardus
ENSMNEG00000038822	MBD1	100	88.303	ENSPTIG00000021231	MBD1	100	88.797	Panthera_tigris_altaica
ENSMNEG00000038822	MBD1	100	99.206	ENSPTRG00000010021	MBD1	100	99.206	Pan_troglodytes
ENSMNEG00000038822	MBD1	100	99.647	ENSPANG00000010867	MBD1	100	99.647	Papio_anubis
ENSMNEG00000038822	MBD1	99	63.993	ENSPEMG00000022630	Mbd1	97	63.932	Peromyscus_maniculatus_bairdii
ENSMNEG00000038822	MBD1	92	53.191	ENSPCIG00000027937	-	79	46.967	Phascolarctos_cinereus
ENSMNEG00000038822	MBD1	100	99.174	ENSPPYG00000009158	MBD1	91	99.174	Pongo_abelii
ENSMNEG00000038822	MBD1	99	76.529	ENSPCAG00000001648	MBD1	93	85.878	Procavia_capensis
ENSMNEG00000038822	MBD1	100	92.739	ENSPCOG00000012450	MBD1	100	92.739	Propithecus_coquereli
ENSMNEG00000038822	MBD1	99	52.431	ENSRNOG00000024104	Mbd1	96	55.479	Rattus_norvegicus
ENSMNEG00000038822	MBD1	100	98.921	ENSRBIG00000041294	MBD1	100	98.921	Rhinopithecus_bieti
ENSMNEG00000038822	MBD1	100	99.048	ENSRROG00000032517	MBD1	100	99.048	Rhinopithecus_roxellana
ENSMNEG00000038822	MBD1	100	95.470	ENSSBOG00000027169	MBD1	100	95.470	Saimiri_boliviensis_boliviensis
ENSMNEG00000038822	MBD1	84	46.253	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSMNEG00000038822	MBD1	52	48.913	ENSSPAG00000021447	mbd1b	55	31.713	Stegastes_partitus
ENSMNEG00000038822	MBD1	100	88.993	ENSSSCG00000004516	MBD1	100	88.993	Sus_scrofa
ENSMNEG00000038822	MBD1	73	31.163	ENSTRUG00000013422	mbd1b	54	30.464	Takifugu_rubripes
ENSMNEG00000038822	MBD1	74	84.167	ENSTBEG00000012651	-	68	84.167	Tupaia_belangeri
ENSMNEG00000038822	MBD1	100	85.008	ENSTTRG00000015523	MBD1	100	85.667	Tursiops_truncatus
ENSMNEG00000038822	MBD1	100	83.003	ENSUAMG00000004752	MBD1	100	83.993	Ursus_americanus
ENSMNEG00000038822	MBD1	100	87.644	ENSUMAG00000002947	MBD1	100	88.138	Ursus_maritimus