EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000039259 (Gene tree)
Gene ID: 105464427
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 12158 bases
Position: chrKQ006630.1:9338509-9350666
Accession: 105464427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000031771	APOBEC_N	PF08210.11	8.6e-36	1	1
ENSMNEP00000031748	APOBEC_N	PF08210.11	1e-35	1	1
ENSMNEP00000031743	APOBEC_N	PF08210.11	1e-35	1	1
ENSMNEP00000031775	APOBEC_N	PF08210.11	1.3e-27	1	1
ENSMNEP00000031771	APOBEC_C	PF05240.14	1.5e-27	1	1
ENSMNEP00000031748	APOBEC_C	PF05240.14	1.5e-27	1	1
ENSMNEP00000031743	APOBEC_C	PF05240.14	1.6e-27	1	1
ENSMNEP00000031775	APOBEC_C	PF05240.14	5.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000056177	APOBEC3H-202	1026	XM_011712325	ENSMNEP00000031748	210 (aa)	XP_011710627	A0A2K6D755
ENSMNET00000056200	APOBEC3H-203	603	-	ENSMNEP00000031771	200 (aa)	-	A0A2K6D795
ENSMNET00000056203	APOBEC3H-204	465	-	ENSMNEP00000031775	154 (aa)	-	A0A2K6D789
ENSMNET00000056172	APOBEC3H-201	1645	XM_011712320	ENSMNEP00000031743	211 (aa)	XP_011710622	A0A2K6D745

Gene Model

Click here to download ENSMNEG00000039259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000039259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000039259	APOBEC3H	90	33.088	ENSMNEG00000043211	-	91	33.088
ENSMNEG00000039259	APOBEC3H	91	34.694	ENSMNEG00000045196	APOBEC3C	96	35.789
ENSMNEG00000039259	APOBEC3H	93	33.831	ENSMNEG00000043421	AICDA	98	33.831
ENSMNEG00000039259	APOBEC3H	88	43.820	ENSMNEG00000043316	APOBEC3D	89	42.742
ENSMNEG00000039259	APOBEC3H	89	37.173	ENSMNEG00000038847	APOBEC3G	90	36.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000039259	APOBEC3H	100	83.766	ENSG00000100298	APOBEC3H	100	83.766	Homo_sapiens
ENSMNEG00000039259	APOBEC3H	94	49.261	ENSAMEG00000010818	-	80	49.261	Ailuropoda_melanoleuca
ENSMNEG00000039259	APOBEC3H	94	73.632	ENSANAG00000025410	APOBEC3H	96	72.430	Aotus_nancymaae
ENSMNEG00000039259	APOBEC3H	99	52.222	ENSBTAG00000007755	APOBEC3H	94	52.222	Bos_taurus
ENSMNEG00000039259	APOBEC3H	100	73.000	ENSCJAG00000012524	APOBEC3H	100	73.000	Callithrix_jacchus
ENSMNEG00000039259	APOBEC3H	94	49.495	ENSCAFG00000001361	APOBEC3Z3	100	49.495	Canis_familiaris
ENSMNEG00000039259	APOBEC3H	95	47.739	ENSCAFG00020002584	-	94	49.730	Canis_lupus_dingo
ENSMNEG00000039259	APOBEC3H	94	51.667	ENSCHIG00000026580	-	98	51.351	Capra_hircus
ENSMNEG00000039259	APOBEC3H	99	48.684	ENSTSYG00000032894	-	100	51.685	Carlito_syrichta
ENSMNEG00000039259	APOBEC3H	99	54.106	ENSCPOG00000009257	-	93	54.106	Cavia_porcellus
ENSMNEG00000039259	APOBEC3H	100	73.885	ENSCCAG00000008525	APOBEC3H	100	73.885	Cebus_capucinus
ENSMNEG00000039259	APOBEC3H	100	94.805	ENSCATG00000030302	APOBEC3H	100	94.805	Cercocebus_atys
ENSMNEG00000039259	APOBEC3H	95	53.500	ENSCLAG00000016615	-	98	53.500	Chinchilla_lanigera
ENSMNEG00000039259	APOBEC3H	100	92.891	ENSCSAG00000006371	APOBEC3H	100	92.891	Chlorocebus_sabaeus
ENSMNEG00000039259	APOBEC3H	95	53.922	ENSCGRG00001022976	Apobec3	92	53.922	Cricetulus_griseus_chok1gshd
ENSMNEG00000039259	APOBEC3H	95	53.922	ENSCGRG00000005621	Apobec3	92	53.922	Cricetulus_griseus_crigri
ENSMNEG00000039259	APOBEC3H	90	52.973	ENSDORG00000027271	-	91	52.973	Dipodomys_ordii
ENSMNEG00000039259	APOBEC3H	94	50.500	ENSECAG00000007726	APOBEC3H	85	50.500	Equus_caballus
ENSMNEG00000039259	APOBEC3H	94	52.261	ENSFCAG00000005251	APOBEC3Z3	99	51.777	Felis_catus
ENSMNEG00000039259	APOBEC3H	91	54.286	ENSSTOG00000007125	-	85	53.333	Ictidomys_tridecemlineatus
ENSMNEG00000039259	APOBEC3H	88	50.735	ENSJJAG00000016840	-	82	50.735	Jaculus_jaculus
ENSMNEG00000039259	APOBEC3H	94	51.685	ENSLAFG00000027404	-	96	51.685	Loxodonta_africana
ENSMNEG00000039259	APOBEC3H	100	99.052	ENSMFAG00000031827	APOBEC3H	100	99.052	Macaca_fascicularis
ENSMNEG00000039259	APOBEC3H	100	99.351	ENSMMUG00000001016	APOBEC3H	100	99.351	Macaca_mulatta
ENSMNEG00000039259	APOBEC3H	100	96.209	ENSMLEG00000033417	APOBEC3H	100	96.209	Mandrillus_leucophaeus
ENSMNEG00000039259	APOBEC3H	95	52.451	ENSMAUG00000011683	Apobec3	88	52.451	Mesocricetus_auratus
ENSMNEG00000039259	APOBEC3H	94	51.256	ENSMOCG00000021576	Apobec3	84	51.759	Microtus_ochrogaster
ENSMNEG00000039259	APOBEC3H	95	48.020	MGP_CAROLIEiJ_G0020029	Apobec3	99	48.020	Mus_caroli
ENSMNEG00000039259	APOBEC3H	95	46.535	ENSMUSG00000009585	Apobec3	99	46.535	Mus_musculus
ENSMNEG00000039259	APOBEC3H	95	48.293	MGP_PahariEiJ_G0020031	-	88	48.293	Mus_pahari
ENSMNEG00000039259	APOBEC3H	94	46.500	MGP_SPRETEiJ_G0020927	Apobec3	92	47.568	Mus_spretus
ENSMNEG00000039259	APOBEC3H	94	49.746	ENSMPUG00000013239	-	75	49.746	Mustela_putorius_furo
ENSMNEG00000039259	APOBEC3H	96	47.500	ENSNGAG00000018998	Apobec3	100	47.500	Nannospalax_galili
ENSMNEG00000039259	APOBEC3H	100	86.256	ENSNLEG00000015218	-	100	86.256	Nomascus_leucogenys
ENSMNEG00000039259	APOBEC3H	93	43.575	ENSOCUG00000023913	-	88	43.575	Oryctolagus_cuniculus
ENSMNEG00000039259	APOBEC3H	94	51.667	ENSOARG00000016290	APOBEC3F	97	51.667	Ovis_aries
ENSMNEG00000039259	APOBEC3H	100	83.117	ENSPPAG00000036522	APOBEC3H	100	83.117	Pan_paniscus
ENSMNEG00000039259	APOBEC3H	94	52.020	ENSPPRG00000003941	-	99	52.020	Panthera_pardus
ENSMNEG00000039259	APOBEC3H	89	37.500	ENSPPRG00000003675	-	81	38.608	Panthera_pardus
ENSMNEG00000039259	APOBEC3H	94	52.020	ENSPTIG00000010283	-	99	52.020	Panthera_tigris_altaica
ENSMNEG00000039259	APOBEC3H	100	83.117	ENSPTRG00000014390	APOBEC3H	100	83.117	Pan_troglodytes
ENSMNEG00000039259	APOBEC3H	100	95.238	ENSPANG00000010774	APOBEC3H	100	95.238	Papio_anubis
ENSMNEG00000039259	APOBEC3H	95	48.529	ENSPEMG00000000456	Apobec3	83	48.529	Peromyscus_maniculatus_bairdii
ENSMNEG00000039259	APOBEC3H	95	87.562	ENSPPYG00000011834	-	100	85.782	Pongo_abelii
ENSMNEG00000039259	APOBEC3H	89	43.575	ENSPCAG00000015655	-	99	43.646	Procavia_capensis
ENSMNEG00000039259	APOBEC3H	64	37.795	ENSPVAG00000024267	-	93	37.795	Pteropus_vampyrus
ENSMNEG00000039259	APOBEC3H	64	38.583	ENSPVAG00000024161	-	93	38.583	Pteropus_vampyrus
ENSMNEG00000039259	APOBEC3H	90	52.174	ENSPVAG00000009462	-	98	51.685	Pteropus_vampyrus
ENSMNEG00000039259	APOBEC3H	94	51.613	ENSRNOG00000016852	Apobec3	90	51.613	Rattus_norvegicus
ENSMNEG00000039259	APOBEC3H	100	91.000	ENSRBIG00000029088	APOBEC3H	100	91.000	Rhinopithecus_bieti
ENSMNEG00000039259	APOBEC3H	100	90.500	ENSRROG00000024699	APOBEC3H	100	90.500	Rhinopithecus_roxellana
ENSMNEG00000039259	APOBEC3H	99	67.299	ENSSBOG00000030005	APOBEC3H	100	73.770	Saimiri_boliviensis_boliviensis
ENSMNEG00000039259	APOBEC3H	97	52.857	ENSSSCG00000000091	APOBEC3B	92	51.659	Sus_scrofa
ENSMNEG00000039259	APOBEC3H	84	56.923	ENSTBEG00000001532	-	100	53.143	Tupaia_belangeri
ENSMNEG00000039259	APOBEC3H	88	55.147	ENSTTRG00000001266	-	100	52.198	Tursiops_truncatus
ENSMNEG00000039259	APOBEC3H	91	52.381	ENSUAMG00000004427	-	85	51.832	Ursus_americanus
ENSMNEG00000039259	APOBEC3H	95	54.422	ENSUMAG00000014435	-	99	53.535	Ursus_maritimus
ENSMNEG00000039259	APOBEC3H	65	56.154	ENSVPAG00000011108	-	98	56.154	Vicugna_pacos