EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000039415 (Gene tree)
Gene ID: 105494455
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 29800 bases
Position: chrKQ005701.1:3061079-3090878
Accession: 105494455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000032276	PWI	PF01480.17	9.3e-30	1	1
ENSMNEP00000032256	PWI	PF01480.17	1e-29	1	1
ENSMNEP00000032243	PWI	PF01480.17	1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000056710	SRRM1-203	2451	-	ENSMNEP00000032276	816 (aa)	-	A0A2K6D8Q5
ENSMNET00000056677	SRRM1-201	3964	XM_011762875	ENSMNEP00000032243	917 (aa)	XP_011761177	A0A2K6D8J0
ENSMNET00000056690	SRRM1-202	3925	XM_011762879	ENSMNEP00000032256	904 (aa)	XP_011761181	A0A2K6D8N5

Gene Model

Click here to download ENSMNEG00000039415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000039415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000039415	SRRM1	100	99.668	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSMNEG00000039415	SRRM1	100	97.495	ENSAMEG00000010075	SRRM1	100	97.495	Ailuropoda_melanoleuca
ENSMNEG00000039415	SRRM1	100	98.673	ENSANAG00000035606	SRRM1	100	98.673	Aotus_nancymaae
ENSMNEG00000039415	SRRM1	100	97.603	ENSCJAG00000020822	SRRM1	100	97.929	Callithrix_jacchus
ENSMNEG00000039415	SRRM1	100	98.009	ENSCAFG00020020948	SRRM1	100	98.009	Canis_lupus_dingo
ENSMNEG00000039415	SRRM1	96	89.245	ENSCAFG00020000003	-	98	89.322	Canis_lupus_dingo
ENSMNEG00000039415	SRRM1	100	98.009	ENSTSYG00000006782	SRRM1	100	98.009	Carlito_syrichta
ENSMNEG00000039415	SRRM1	99	94.537	ENSCAPG00000011473	SRRM1	100	94.537	Cavia_aperea
ENSMNEG00000039415	SRRM1	100	95.465	ENSCPOG00000015594	SRRM1	59	94.805	Cavia_porcellus
ENSMNEG00000039415	SRRM1	100	98.451	ENSCCAG00000029474	SRRM1	100	98.451	Cebus_capucinus
ENSMNEG00000039415	SRRM1	100	100.000	ENSCATG00000031303	SRRM1	100	100.000	Cercocebus_atys
ENSMNEG00000039415	SRRM1	74	97.222	ENSCHOG00000000027	SRRM1	73	97.222	Choloepus_hoffmanni
ENSMNEG00000039415	SRRM1	100	99.668	ENSCANG00000028271	SRRM1	100	99.668	Colobus_angolensis_palliatus
ENSMNEG00000039415	SRRM1	96	93.439	ENSDNOG00000049141	SRRM1	98	93.439	Dasypus_novemcinctus
ENSMNEG00000039415	SRRM1	100	96.841	ENSEASG00005004270	SRRM1	100	96.841	Equus_asinus_asinus
ENSMNEG00000039415	SRRM1	100	97.124	ENSECAG00000026981	SRRM1	100	97.124	Equus_caballus
ENSMNEG00000039415	SRRM1	100	98.119	ENSFCAG00000000678	-	100	98.119	Felis_catus
ENSMNEG00000039415	SRRM1	100	99.632	ENSGGOG00000005209	SRRM1	100	99.632	Gorilla_gorilla
ENSMNEG00000039415	SRRM1	100	98.230	ENSSTOG00000014640	SRRM1	100	98.230	Ictidomys_tridecemlineatus
ENSMNEG00000039415	SRRM1	100	94.592	ENSLAFG00000013830	SRRM1	60	92.895	Loxodonta_africana
ENSMNEG00000039415	SRRM1	86	77.437	ENSMFAG00000038841	-	61	80.684	Macaca_fascicularis
ENSMNEG00000039415	SRRM1	100	100.000	ENSMFAG00000025726	SRRM1	100	100.000	Macaca_fascicularis
ENSMNEG00000039415	SRRM1	100	99.889	ENSMMUG00000006645	SRRM1	100	99.889	Macaca_mulatta
ENSMNEG00000039415	SRRM1	59	70.709	ENSMLEG00000032221	-	61	73.384	Mandrillus_leucophaeus
ENSMNEG00000039415	SRRM1	100	92.826	ENSMLEG00000038030	-	100	94.363	Mandrillus_leucophaeus
ENSMNEG00000039415	SRRM1	100	98.341	ENSMICG00000006553	SRRM1	100	98.341	Microcebus_murinus
ENSMNEG00000039415	SRRM1	96	94.869	ENSMLUG00000006246	SRRM1	87	94.869	Myotis_lucifugus
ENSMNEG00000039415	SRRM1	100	99.755	ENSNLEG00000008966	SRRM1	100	99.755	Nomascus_leucogenys
ENSMNEG00000039415	SRRM1	55	89.815	ENSMEUG00000014704	SRRM1	60	88.095	Notamacropus_eugenii
ENSMNEG00000039415	SRRM1	100	96.526	ENSOCUG00000008438	SRRM1	59	95.572	Oryctolagus_cuniculus
ENSMNEG00000039415	SRRM1	100	97.059	ENSOGAG00000010210	SRRM1	100	97.059	Otolemur_garnettii
ENSMNEG00000039415	SRRM1	100	99.558	ENSPPAG00000043918	SRRM1	100	99.558	Pan_paniscus
ENSMNEG00000039415	SRRM1	100	98.119	ENSPPRG00000002509	SRRM1	100	98.119	Panthera_pardus
ENSMNEG00000039415	SRRM1	60	96.721	ENSPTIG00000008778	-	61	96.660	Panthera_tigris_altaica
ENSMNEG00000039415	SRRM1	100	99.668	ENSPTRG00000000349	SRRM1	100	99.668	Pan_troglodytes
ENSMNEG00000039415	SRRM1	100	100.000	ENSPANG00000010194	SRRM1	100	100.000	Papio_anubis
ENSMNEG00000039415	SRRM1	55	79.435	ENSPANG00000035568	-	59	78.427	Papio_anubis
ENSMNEG00000039415	SRRM1	100	98.694	ENSPPYG00000001716	SRRM1	100	98.694	Pongo_abelii
ENSMNEG00000039415	SRRM1	100	97.497	ENSPCOG00000021311	SRRM1	100	97.497	Propithecus_coquereli
ENSMNEG00000039415	SRRM1	100	97.168	ENSPVAG00000005836	SRRM1	100	97.168	Pteropus_vampyrus
ENSMNEG00000039415	SRRM1	100	93.091	ENSRBIG00000035461	SRRM1	99	93.023	Rhinopithecus_bieti
ENSMNEG00000039415	SRRM1	100	99.779	ENSRROG00000035151	SRRM1	100	99.779	Rhinopithecus_roxellana
ENSMNEG00000039415	SRRM1	100	96.841	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSMNEG00000039415	SRRM1	61	94.754	ENSSARG00000013718	SRRM1	60	94.754	Sorex_araneus
ENSMNEG00000039415	SRRM1	60	73.519	ENSSPUG00000015890	SRRM1	57	82.657	Sphenodon_punctatus
ENSMNEG00000039415	SRRM1	99	97.805	ENSSSCG00000032947	SRRM1	100	97.808	Sus_scrofa
ENSMNEG00000039415	SRRM1	100	96.841	ENSTBEG00000000100	SRRM1	59	96.289	Tupaia_belangeri
ENSMNEG00000039415	SRRM1	99	96.597	ENSTTRG00000009365	SRRM1	100	96.597	Tursiops_truncatus
ENSMNEG00000039415	SRRM1	88	98.747	ENSUMAG00000013121	SRRM1	95	98.747	Ursus_maritimus
ENSMNEG00000039415	SRRM1	96	93.537	ENSVPAG00000007698	SRRM1	100	93.537	Vicugna_pacos
ENSMNEG00000039415	SRRM1	96	98.469	ENSVVUG00000026966	SRRM1	97	95.419	Vulpes_vulpes