EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000039808 (Gene tree)
Gene ID: 105474726
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 438096 bases
Position: chrKQ004720.1:568417-1006512
Accession: 105474726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000033887	TUDOR	PF00567.24	7.5e-28	1	1
ENSMNEP00000033881	TUDOR	PF00567.24	7.5e-28	1	1
ENSMNEP00000033856	TUDOR	PF00567.24	7.9e-28	1	1
ENSMNEP00000033887	SNase	PF00565.17	1.7e-69	1	5
ENSMNEP00000033887	SNase	PF00565.17	1.7e-69	2	5
ENSMNEP00000033887	SNase	PF00565.17	1.7e-69	3	5
ENSMNEP00000033887	SNase	PF00565.17	1.7e-69	4	5
ENSMNEP00000033887	SNase	PF00565.17	1.7e-69	5	5
ENSMNEP00000033881	SNase	PF00565.17	1.7e-69	1	5
ENSMNEP00000033881	SNase	PF00565.17	1.7e-69	2	5
ENSMNEP00000033881	SNase	PF00565.17	1.7e-69	3	5
ENSMNEP00000033881	SNase	PF00565.17	1.7e-69	4	5
ENSMNEP00000033881	SNase	PF00565.17	1.7e-69	5	5
ENSMNEP00000033856	SNase	PF00565.17	2e-69	1	5
ENSMNEP00000033856	SNase	PF00565.17	2e-69	2	5
ENSMNEP00000033856	SNase	PF00565.17	2e-69	3	5
ENSMNEP00000033856	SNase	PF00565.17	2e-69	4	5
ENSMNEP00000033856	SNase	PF00565.17	2e-69	5	5
ENSMNEP00000033901	SNase	PF00565.17	1.9e-48	1	3
ENSMNEP00000033901	SNase	PF00565.17	1.9e-48	2	3
ENSMNEP00000033901	SNase	PF00565.17	1.9e-48	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000058328	SND1-202	2664	-	ENSMNEP00000033881	887 (aa)	-	A0A2K6DD81
ENSMNET00000058348	SND1-204	1752	-	ENSMNEP00000033901	583 (aa)	-	A0A2K6DDA7
ENSMNET00000058334	SND1-203	2658	-	ENSMNEP00000033887	885 (aa)	-	A0A2K6DDA8
ENSMNET00000058303	SND1-201	3659	XM_011729557	ENSMNEP00000033856	910 (aa)	XP_011727859	A0A2K6DD56

Gene Model

Click here to download ENSMNEG00000039808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000039808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000039808	SND1	100	99.661	ENSG00000197157	SND1	100	99.560	Homo_sapiens
ENSMNEG00000039808	SND1	100	85.006	ENSAPOG00000017599	snd1	99	84.761	Acanthochromis_polyacanthus
ENSMNEG00000039808	SND1	100	98.873	ENSAMEG00000004664	SND1	94	98.794	Ailuropoda_melanoleuca
ENSMNEG00000039808	SND1	100	82.167	ENSACIG00000003551	snd1	99	82.071	Amphilophus_citrinellus
ENSMNEG00000039808	SND1	100	84.780	ENSAOCG00000014166	snd1	99	84.538	Amphiprion_ocellaris
ENSMNEG00000039808	SND1	100	84.780	ENSAPEG00000007067	snd1	99	84.538	Amphiprion_percula
ENSMNEG00000039808	SND1	97	87.831	ENSATEG00000018475	snd1	88	84.265	Anabas_testudineus
ENSMNEG00000039808	SND1	100	99.341	ENSANAG00000034463	SND1	100	99.341	Aotus_nancymaae
ENSMNEG00000039808	SND1	100	84.442	ENSACLG00000022897	snd1	99	84.187	Astatotilapia_calliptera
ENSMNEG00000039808	SND1	100	85.039	ENSAMXG00000016318	snd1	98	84.967	Astyanax_mexicanus
ENSMNEG00000039808	SND1	100	98.901	ENSBTAG00000010692	SND1	100	98.901	Bos_taurus
ENSMNEG00000039808	SND1	97	51.916	WBGene00006626	tsn-1	98	47.368	Caenorhabditis_elegans
ENSMNEG00000039808	SND1	100	99.121	ENSCJAG00000017668	SND1	100	99.121	Callithrix_jacchus
ENSMNEG00000039808	SND1	100	99.322	ENSCAFG00000001700	SND1	100	99.231	Canis_familiaris
ENSMNEG00000039808	SND1	100	99.322	ENSCAFG00020021639	SND1	100	99.231	Canis_lupus_dingo
ENSMNEG00000039808	SND1	100	99.231	ENSCHIG00000023390	SND1	100	99.231	Capra_hircus
ENSMNEG00000039808	SND1	97	99.469	ENSTSYG00000004979	SND1	97	99.469	Carlito_syrichta
ENSMNEG00000039808	SND1	99	85.440	ENSCAPG00000010677	SND1	98	84.710	Cavia_aperea
ENSMNEG00000039808	SND1	100	98.132	ENSCPOG00000006251	SND1	100	98.132	Cavia_porcellus
ENSMNEG00000039808	SND1	100	99.451	ENSCCAG00000036847	SND1	100	99.451	Cebus_capucinus
ENSMNEG00000039808	SND1	100	100.000	ENSCATG00000035214	SND1	100	100.000	Cercocebus_atys
ENSMNEG00000039808	SND1	100	98.305	ENSCLAG00000011796	SND1	100	98.242	Chinchilla_lanigera
ENSMNEG00000039808	SND1	100	100.000	ENSCSAG00000010182	SND1	100	100.000	Chlorocebus_sabaeus
ENSMNEG00000039808	SND1	97	73.982	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSMNEG00000039808	SND1	100	93.446	ENSCPBG00000018094	SND1	98	93.386	Chrysemys_picta_bellii
ENSMNEG00000039808	SND1	96	61.780	ENSCING00000000524	-	98	57.143	Ciona_intestinalis
ENSMNEG00000039808	SND1	97	62.982	ENSCSAVG00000008807	-	99	58.453	Ciona_savignyi
ENSMNEG00000039808	SND1	100	100.000	ENSCANG00000035119	SND1	100	100.000	Colobus_angolensis_palliatus
ENSMNEG00000039808	SND1	100	97.288	ENSCGRG00001022514	Snd1	100	97.253	Cricetulus_griseus_chok1gshd
ENSMNEG00000039808	SND1	99	97.285	ENSCGRG00000012277	Snd1	99	97.285	Cricetulus_griseus_crigri
ENSMNEG00000039808	SND1	100	84.667	ENSCSEG00000008661	snd1	98	84.676	Cynoglossus_semilaevis
ENSMNEG00000039808	SND1	97	88.536	ENSCVAG00000010316	snd1	100	83.793	Cyprinodon_variegatus
ENSMNEG00000039808	SND1	100	85.923	ENSDARG00000006766	snd1	97	87.590	Danio_rerio
ENSMNEG00000039808	SND1	100	96.167	ENSDNOG00000006795	SND1	100	96.167	Dasypus_novemcinctus
ENSMNEG00000039808	SND1	100	98.791	ENSDORG00000000336	Snd1	100	98.791	Dipodomys_ordii
ENSMNEG00000039808	SND1	97	53.754	FBgn0035121	Tudor-SN	98	50.703	Drosophila_melanogaster
ENSMNEG00000039808	SND1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSMNEG00000039808	SND1	93	67.302	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSMNEG00000039808	SND1	100	97.624	ENSEASG00005008513	SND1	100	97.624	Equus_asinus_asinus
ENSMNEG00000039808	SND1	100	99.231	ENSECAG00000011451	SND1	100	99.231	Equus_caballus
ENSMNEG00000039808	SND1	97	97.168	ENSEEUG00000014737	SND1	100	86.923	Erinaceus_europaeus
ENSMNEG00000039808	SND1	99	83.427	ENSELUG00000001805	snd1	95	83.278	Esox_lucius
ENSMNEG00000039808	SND1	100	99.322	ENSFCAG00000008289	SND1	100	99.231	Felis_catus
ENSMNEG00000039808	SND1	100	98.531	ENSFDAG00000015881	SND1	100	98.462	Fukomys_damarensis
ENSMNEG00000039808	SND1	97	88.007	ENSFHEG00000004093	snd1	97	84.983	Fundulus_heteroclitus
ENSMNEG00000039808	SND1	64	75.141	ENSGMOG00000018932	snd1	64	75.141	Gadus_morhua
ENSMNEG00000039808	SND1	56	93.478	ENSGALG00000052684	-	50	93.583	Gallus_gallus
ENSMNEG00000039808	SND1	100	85.344	ENSGAFG00000008421	snd1	99	85.327	Gambusia_affinis
ENSMNEG00000039808	SND1	100	54.129	ENSGACG00000019793	snd1	98	54.314	Gasterosteus_aculeatus
ENSMNEG00000039808	SND1	100	99.780	ENSGGOG00000009614	SND1	100	99.780	Gorilla_gorilla
ENSMNEG00000039808	SND1	100	84.442	ENSHBUG00000019135	snd1	99	84.187	Haplochromis_burtoni
ENSMNEG00000039808	SND1	100	98.132	ENSHGLG00000003618	SND1	100	98.132	Heterocephalus_glaber_female
ENSMNEG00000039808	SND1	100	98.079	ENSHGLG00100012449	SND1	100	97.680	Heterocephalus_glaber_male
ENSMNEG00000039808	SND1	97	87.302	ENSHCOG00000005266	snd1	98	84.004	Hippocampus_comes
ENSMNEG00000039808	SND1	97	87.346	ENSIPUG00000013279	snd1	98	83.742	Ictalurus_punctatus
ENSMNEG00000039808	SND1	100	98.791	ENSSTOG00000002140	SND1	100	98.791	Ictidomys_tridecemlineatus
ENSMNEG00000039808	SND1	100	98.901	ENSJJAG00000009561	Snd1	100	98.901	Jaculus_jaculus
ENSMNEG00000039808	SND1	100	85.118	ENSKMAG00000016997	snd1	98	85.123	Kryptolebias_marmoratus
ENSMNEG00000039808	SND1	100	86.515	ENSLBEG00000013563	snd1	99	83.760	Labrus_bergylta
ENSMNEG00000039808	SND1	100	85.810	ENSLOCG00000015537	snd1	98	85.557	Lepisosteus_oculatus
ENSMNEG00000039808	SND1	100	98.644	ENSLAFG00000009696	SND1	100	98.462	Loxodonta_africana
ENSMNEG00000039808	SND1	100	100.000	ENSMFAG00000038114	SND1	100	100.000	Macaca_fascicularis
ENSMNEG00000039808	SND1	100	100.000	ENSMMUG00000015432	SND1	100	100.000	Macaca_mulatta
ENSMNEG00000039808	SND1	100	100.000	ENSMLEG00000029040	SND1	100	100.000	Mandrillus_leucophaeus
ENSMNEG00000039808	SND1	97	88.007	ENSMAMG00000011739	snd1	98	84.598	Mastacembelus_armatus
ENSMNEG00000039808	SND1	100	84.442	ENSMZEG00005005681	snd1	99	84.187	Maylandia_zebra
ENSMNEG00000039808	SND1	100	99.341	ENSMICG00000000097	SND1	100	99.341	Microcebus_murinus
ENSMNEG00000039808	SND1	100	98.132	ENSMOCG00000005040	Snd1	100	98.132	Microtus_ochrogaster
ENSMNEG00000039808	SND1	100	84.555	ENSMMOG00000001795	snd1	99	84.316	Mola_mola
ENSMNEG00000039808	SND1	100	96.158	ENSMODG00000015182	SND1	99	95.987	Monodelphis_domestica
ENSMNEG00000039808	SND1	100	84.216	ENSMALG00000012071	snd1	98	84.152	Monopterus_albus
ENSMNEG00000039808	SND1	100	97.853	MGP_CAROLIEiJ_G0028159	Snd1	100	97.802	Mus_caroli
ENSMNEG00000039808	SND1	100	97.627	ENSMUSG00000001424	Snd1	100	97.582	Mus_musculus
ENSMNEG00000039808	SND1	100	97.853	MGP_PahariEiJ_G0021917	Snd1	100	98.482	Mus_pahari
ENSMNEG00000039808	SND1	100	97.853	MGP_SPRETEiJ_G0029159	Snd1	100	97.802	Mus_spretus
ENSMNEG00000039808	SND1	100	98.757	ENSMPUG00000006545	SND1	100	98.571	Mustela_putorius_furo
ENSMNEG00000039808	SND1	99	97.318	ENSMLUG00000017130	SND1	99	97.318	Myotis_lucifugus
ENSMNEG00000039808	SND1	100	98.132	ENSNGAG00000011186	Snd1	100	98.132	Nannospalax_galili
ENSMNEG00000039808	SND1	100	84.329	ENSNBRG00000006681	snd1	99	84.076	Neolamprologus_brichardi
ENSMNEG00000039808	SND1	100	99.774	ENSNLEG00000012263	SND1	100	99.774	Nomascus_leucogenys
ENSMNEG00000039808	SND1	93	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSMNEG00000039808	SND1	100	98.644	ENSODEG00000011502	SND1	100	98.462	Octodon_degus
ENSMNEG00000039808	SND1	100	84.329	ENSONIG00000011481	snd1	96	84.076	Oreochromis_niloticus
ENSMNEG00000039808	SND1	99	94.796	ENSOANG00000000817	SND1	99	93.868	Ornithorhynchus_anatinus
ENSMNEG00000039808	SND1	100	97.627	ENSOCUG00000001620	SND1	100	97.582	Oryctolagus_cuniculus
ENSMNEG00000039808	SND1	97	87.831	ENSORLG00000015201	snd1	98	84.022	Oryzias_latipes
ENSMNEG00000039808	SND1	97	87.831	ENSORLG00020013991	snd1	98	84.134	Oryzias_latipes_hni
ENSMNEG00000039808	SND1	97	87.831	ENSORLG00015012436	snd1	98	84.134	Oryzias_latipes_hsok
ENSMNEG00000039808	SND1	100	84.442	ENSOMEG00000006406	snd1	98	84.452	Oryzias_melastigma
ENSMNEG00000039808	SND1	100	99.232	ENSOGAG00000013356	SND1	94	99.232	Otolemur_garnettii
ENSMNEG00000039808	SND1	97	99.646	ENSOARG00000002149	SND1	100	96.271	Ovis_aries
ENSMNEG00000039808	SND1	100	99.670	ENSPPAG00000042947	SND1	100	99.670	Pan_paniscus
ENSMNEG00000039808	SND1	100	99.322	ENSPPRG00000004494	SND1	100	99.231	Panthera_pardus
ENSMNEG00000039808	SND1	100	99.209	ENSPTIG00000014214	SND1	100	99.121	Panthera_tigris_altaica
ENSMNEG00000039808	SND1	100	99.670	ENSPTRG00000023911	SND1	100	99.670	Pan_troglodytes
ENSMNEG00000039808	SND1	100	100.000	ENSPANG00000011997	SND1	100	100.000	Papio_anubis
ENSMNEG00000039808	SND1	97	85.366	ENSPKIG00000023494	snd1	98	81.909	Paramormyrops_kingsleyae
ENSMNEG00000039808	SND1	94	86.182	ENSPMGG00000003629	snd1	100	83.234	Periophthalmus_magnuspinnatus
ENSMNEG00000039808	SND1	100	98.022	ENSPEMG00000010240	Snd1	100	98.022	Peromyscus_maniculatus_bairdii
ENSMNEG00000039808	SND1	97	79.577	ENSPMAG00000007915	-	99	73.559	Petromyzon_marinus
ENSMNEG00000039808	SND1	100	96.610	ENSPCIG00000011561	SND1	100	96.484	Phascolarctos_cinereus
ENSMNEG00000039808	SND1	100	85.006	ENSPFOG00000001557	snd1	99	84.872	Poecilia_formosa
ENSMNEG00000039808	SND1	100	85.006	ENSPLAG00000018459	snd1	96	84.872	Poecilia_latipinna
ENSMNEG00000039808	SND1	100	85.457	ENSPMEG00000006803	snd1	99	85.317	Poecilia_mexicana
ENSMNEG00000039808	SND1	97	88.183	ENSPREG00000002189	snd1	99	84.983	Poecilia_reticulata
ENSMNEG00000039808	SND1	97	99.823	ENSPPYG00000017972	SND1	100	99.628	Pongo_abelii
ENSMNEG00000039808	SND1	100	86.813	ENSPCAG00000011305	SND1	99	86.734	Procavia_capensis
ENSMNEG00000039808	SND1	100	99.560	ENSPCOG00000026791	SND1	100	99.560	Propithecus_coquereli
ENSMNEG00000039808	SND1	100	97.143	ENSPVAG00000013945	SND1	100	97.143	Pteropus_vampyrus
ENSMNEG00000039808	SND1	100	84.442	ENSPNYG00000000932	snd1	99	84.187	Pundamilia_nyererei
ENSMNEG00000039808	SND1	97	87.873	ENSPNAG00000001206	snd1	98	84.444	Pygocentrus_nattereri
ENSMNEG00000039808	SND1	100	97.627	ENSRNOG00000031173	Snd1	99	97.467	Rattus_norvegicus
ENSMNEG00000039808	SND1	97	99.812	ENSRBIG00000027782	-	93	99.810	Rhinopithecus_bieti
ENSMNEG00000039808	SND1	100	100.000	ENSRROG00000033020	SND1	100	100.000	Rhinopithecus_roxellana
ENSMNEG00000039808	SND1	100	99.341	ENSSBOG00000032461	SND1	100	99.341	Saimiri_boliviensis_boliviensis
ENSMNEG00000039808	SND1	99	93.439	ENSSHAG00000015359	SND1	100	93.018	Sarcophilus_harrisii
ENSMNEG00000039808	SND1	97	86.411	ENSSFOG00015001103	snd1	98	83.463	Scleropages_formosus
ENSMNEG00000039808	SND1	100	83.991	ENSSMAG00000001932	snd1	93	83.742	Scophthalmus_maximus
ENSMNEG00000039808	SND1	100	84.780	ENSSDUG00000002699	snd1	92	84.538	Seriola_dumerili
ENSMNEG00000039808	SND1	100	77.339	ENSSLDG00000001950	snd1	98	77.197	Seriola_lalandi_dorsalis
ENSMNEG00000039808	SND1	97	91.858	ENSSARG00000004877	SND1	92	96.226	Sorex_araneus
ENSMNEG00000039808	SND1	99	85.787	ENSSPUG00000017586	SND1	96	87.826	Sphenodon_punctatus
ENSMNEG00000039808	SND1	98	86.491	ENSSPAG00000021398	snd1	96	86.911	Stegastes_partitus
ENSMNEG00000039808	SND1	100	98.901	ENSSSCG00000016590	SND1	100	98.901	Sus_scrofa
ENSMNEG00000039808	SND1	100	85.156	ENSTRUG00000014067	snd1	98	83.893	Takifugu_rubripes
ENSMNEG00000039808	SND1	97	87.478	ENSTNIG00000011019	snd1	98	84.452	Tetraodon_nigroviridis
ENSMNEG00000039808	SND1	96	93.160	ENSTBEG00000003999	SND1	100	93.160	Tupaia_belangeri
ENSMNEG00000039808	SND1	100	94.286	ENSTTRG00000006059	SND1	100	94.286	Tursiops_truncatus
ENSMNEG00000039808	SND1	89	89.972	ENSUAMG00000002820	-	86	90.323	Ursus_americanus
ENSMNEG00000039808	SND1	93	98.859	ENSUAMG00000005604	-	93	98.859	Ursus_americanus
ENSMNEG00000039808	SND1	100	99.209	ENSUMAG00000005960	SND1	100	99.011	Ursus_maritimus
ENSMNEG00000039808	SND1	97	87.965	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSMNEG00000039808	SND1	100	99.096	ENSVVUG00000007226	SND1	100	99.011	Vulpes_vulpes
ENSMNEG00000039808	SND1	97	91.327	ENSXETG00000023043	snd1	100	84.668	Xenopus_tropicalis
ENSMNEG00000039808	SND1	94	87.636	ENSXCOG00000013629	snd1	99	81.591	Xiphophorus_couchianus
ENSMNEG00000039808	SND1	100	85.344	ENSXMAG00000011469	snd1	99	85.206	Xiphophorus_maculatus