EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000039977 (Gene tree)
Gene ID: 105485117
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 12776 bases
Position: chrKQ004853.1:313075-325850
Accession: 105485117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000033510	RRM_1	PF00076.22	8.4e-06	1	1
ENSMNEP00000033503	RRM_1	PF00076.22	1.2e-05	1	1
ENSMNEP00000033500	RRM_1	PF00076.22	2.1e-05	1	1
ENSMNEP00000033480	RRM_1	PF00076.22	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000057927	RDM1-201	1225	XM_011747309	ENSMNEP00000033480	284 (aa)	XP_011745611	A0A2K6DC46
ENSMNET00000057950	RDM1-203	501	-	ENSMNEP00000033503	166 (aa)	-	A0A2K6DC59
ENSMNET00000057956	RDM1-204	420	-	ENSMNEP00000033510	139 (aa)	-	A0A2K6DC75
ENSMNET00000057947	RDM1-202	756	-	ENSMNEP00000033500	251 (aa)	-	A0A2K6DC66

Gene Model

Click here to download ENSMNEG00000039977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000039977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000039977	RDM1	100	96.403	ENSG00000278023	RDM1	100	97.015	Homo_sapiens
ENSMNEG00000039977	RDM1	96	45.185	ENSAPOG00000021886	zgc:103564	84	34.783	Acanthochromis_polyacanthus
ENSMNEG00000039977	RDM1	96	45.185	ENSAPEG00000008929	zgc:103564	92	33.730	Amphiprion_percula
ENSMNEG00000039977	RDM1	73	67.327	ENSAPLG00000004384	RDM1	94	53.846	Anas_platyrhynchos
ENSMNEG00000039977	RDM1	95	56.818	ENSACAG00000012989	-	100	50.178	Anolis_carolinensis
ENSMNEG00000039977	RDM1	100	92.806	ENSANAG00000032752	RDM1	100	92.806	Aotus_nancymaae
ENSMNEG00000039977	RDM1	100	89.630	ENSBTAG00000000030	RDM1	100	80.351	Bos_taurus
ENSMNEG00000039977	RDM1	100	92.806	ENSCJAG00000015031	RDM1	100	92.806	Callithrix_jacchus
ENSMNEG00000039977	RDM1	96	75.735	ENSCAFG00000015160	-	100	74.219	Canis_familiaris
ENSMNEG00000039977	RDM1	98	88.148	ENSCHIG00000020607	RDM1	100	80.142	Capra_hircus
ENSMNEG00000039977	RDM1	96	81.203	ENSCPOG00000001495	-	99	70.070	Cavia_porcellus
ENSMNEG00000039977	RDM1	100	92.086	ENSCCAG00000035763	RDM1	100	92.086	Cebus_capucinus
ENSMNEG00000039977	RDM1	100	100.000	ENSCATG00000044451	RDM1	100	100.000	Cercocebus_atys
ENSMNEG00000039977	RDM1	94	94.361	ENSCSAG00000006209	RDM1	100	94.361	Chlorocebus_sabaeus
ENSMNEG00000039977	RDM1	73	72.277	ENSCPBG00000009105	RDM1	93	55.918	Chrysemys_picta_bellii
ENSMNEG00000039977	RDM1	100	97.610	ENSCANG00000041322	RDM1	100	97.610	Colobus_angolensis_palliatus
ENSMNEG00000039977	RDM1	96	81.203	ENSCGRG00001015927	Rdm1	99	74.205	Cricetulus_griseus_chok1gshd
ENSMNEG00000039977	RDM1	94	40.602	ENSCVAG00000001956	zgc:103564	96	35.581	Cyprinodon_variegatus
ENSMNEG00000039977	RDM1	89	81.818	ENSDNOG00000045224	-	94	81.818	Dasypus_novemcinctus
ENSMNEG00000039977	RDM1	73	90.196	ENSEASG00005010554	RDM1	69	81.443	Equus_asinus_asinus
ENSMNEG00000039977	RDM1	96	91.729	ENSECAG00000022182	RDM1	91	81.961	Equus_caballus
ENSMNEG00000039977	RDM1	81	82.178	ENSEEUG00000006127	RDM1	100	73.413	Erinaceus_europaeus
ENSMNEG00000039977	RDM1	100	84.892	ENSFCAG00000043429	RDM1	100	84.892	Felis_catus
ENSMNEG00000039977	RDM1	95	63.636	ENSGALG00000000243	RDM1	97	54.874	Gallus_gallus
ENSMNEG00000039977	RDM1	73	71.287	ENSGAGG00000000293	-	78	55.020	Gopherus_agassizii
ENSMNEG00000039977	RDM1	100	97.122	ENSGGOG00000010584	RDM1	100	97.122	Gorilla_gorilla
ENSMNEG00000039977	RDM1	94	43.939	ENSHCOG00000002518	-	97	35.689	Hippocampus_comes
ENSMNEG00000039977	RDM1	100	87.407	ENSSTOG00000022491	RDM1	100	83.099	Ictidomys_tridecemlineatus
ENSMNEG00000039977	RDM1	96	87.970	ENSLAFG00000029300	RDM1	100	79.021	Loxodonta_africana
ENSMNEG00000039977	RDM1	100	100.000	ENSMFAG00000032968	RDM1	100	100.000	Macaca_fascicularis
ENSMNEG00000039977	RDM1	100	100.000	ENSMMUG00000006847	RDM1	100	100.000	Macaca_mulatta
ENSMNEG00000039977	RDM1	100	100.000	ENSMLEG00000041158	RDM1	100	100.000	Mandrillus_leucophaeus
ENSMNEG00000039977	RDM1	82	62.281	ENSMGAG00000008774	RDM1	96	55.510	Meleagris_gallopavo
ENSMNEG00000039977	RDM1	99	80.000	ENSMAUG00000018559	Rdm1	99	73.592	Mesocricetus_auratus
ENSMNEG00000039977	RDM1	100	91.852	ENSMICG00000038651	RDM1	100	90.580	Microcebus_murinus
ENSMNEG00000039977	RDM1	96	78.947	ENSMOCG00000015095	Rdm1	99	69.928	Microtus_ochrogaster
ENSMNEG00000039977	RDM1	95	72.727	ENSMODG00000011101	RDM1	100	64.130	Monodelphis_domestica
ENSMNEG00000039977	RDM1	96	84.211	MGP_CAROLIEiJ_G0017226	Rdm1	99	73.498	Mus_caroli
ENSMNEG00000039977	RDM1	96	83.459	ENSMUSG00000010362	Rdm1	99	73.571	Mus_musculus
ENSMNEG00000039977	RDM1	99	83.704	MGP_PahariEiJ_G0018356	Rdm1	99	73.592	Mus_pahari
ENSMNEG00000039977	RDM1	96	82.707	MGP_SPRETEiJ_G0018069	Rdm1	99	73.145	Mus_spretus
ENSMNEG00000039977	RDM1	100	88.148	ENSMPUG00000008363	RDM1	100	81.119	Mustela_putorius_furo
ENSMNEG00000039977	RDM1	100	96.386	ENSNLEG00000014173	RDM1	100	96.386	Nomascus_leucogenys
ENSMNEG00000039977	RDM1	95	72.727	ENSMEUG00000015826	RDM1	95	68.644	Notamacropus_eugenii
ENSMNEG00000039977	RDM1	96	86.466	ENSOCUG00000022704	RDM1	99	76.894	Oryctolagus_cuniculus
ENSMNEG00000039977	RDM1	100	85.185	ENSOGAG00000011332	RDM1	100	83.451	Otolemur_garnettii
ENSMNEG00000039977	RDM1	100	97.037	ENSPPAG00000029969	RDM1	100	96.479	Pan_paniscus
ENSMNEG00000039977	RDM1	100	97.842	ENSPTRG00000009031	RDM1	100	97.842	Pan_troglodytes
ENSMNEG00000039977	RDM1	100	99.398	ENSPANG00000022933	RDM1	100	99.398	Papio_anubis
ENSMNEG00000039977	RDM1	96	80.451	ENSPEMG00000018985	Rdm1	99	73.239	Peromyscus_maniculatus_bairdii
ENSMNEG00000039977	RDM1	100	95.556	ENSPPYG00000008198	RDM1	100	95.070	Pongo_abelii
ENSMNEG00000039977	RDM1	100	87.770	ENSPCOG00000017995	RDM1	100	87.770	Propithecus_coquereli
ENSMNEG00000039977	RDM1	96	90.977	ENSPVAG00000001116	RDM1	100	84.861	Pteropus_vampyrus
ENSMNEG00000039977	RDM1	96	83.459	ENSRNOG00000020751	Rdm1	99	73.214	Rattus_norvegicus
ENSMNEG00000039977	RDM1	100	98.795	ENSRBIG00000030000	RDM1	100	98.795	Rhinopithecus_bieti
ENSMNEG00000039977	RDM1	100	98.795	ENSRROG00000035242	RDM1	100	98.795	Rhinopithecus_roxellana
ENSMNEG00000039977	RDM1	95	75.000	ENSSHAG00000013584	RDM1	100	66.304	Sarcophilus_harrisii
ENSMNEG00000039977	RDM1	93	62.791	ENSSPUG00000010941	RDM1	94	54.340	Sphenodon_punctatus
ENSMNEG00000039977	RDM1	94	47.794	ENSSPAG00000011690	-	95	36.604	Stegastes_partitus
ENSMNEG00000039977	RDM1	81	81.250	ENSSSCG00000017574	-	93	72.321	Sus_scrofa
ENSMNEG00000039977	RDM1	81	83.495	ENSTBEG00000010030	RDM1	99	62.698	Tupaia_belangeri
ENSMNEG00000039977	RDM1	100	88.148	ENSUAMG00000027279	RDM1	100	82.746	Ursus_americanus
ENSMNEG00000039977	RDM1	100	88.148	ENSUMAG00000015423	RDM1	98	82.746	Ursus_maritimus