EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000040308 (Gene tree)
Gene ID: 105477667
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 6676 bases
Position: chrKQ009149.1:8457938-8464613
Accession: 105477667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000034211	PseudoU_synth_2	PF00849.22	6.4e-21	1	1
ENSMNEP00000034219	PseudoU_synth_2	PF00849.22	3.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000058667	RPUSD3-202	1011	-	ENSMNEP00000034219	336 (aa)	-	A0A2K6DE90
ENSMNET00000058660	RPUSD3-201	1288	XM_011734280	ENSMNEP00000034211	351 (aa)	XP_011732582	A0A2K6DE63

Gene Model

Click here to download ENSMNEG00000040308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000040308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000040308	RPUSD3	79	30.104	ENSMNEG00000027414	RPUSD4	72	30.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000040308	RPUSD3	100	92.023	ENSG00000156990	RPUSD3	100	92.023	Homo_sapiens
ENSMNEG00000040308	RPUSD3	100	79.830	ENSAMEG00000016227	RPUSD3	100	79.830	Ailuropoda_melanoleuca
ENSMNEG00000040308	RPUSD3	81	55.986	ENSACAG00000009836	RPUSD3	81	55.986	Anolis_carolinensis
ENSMNEG00000040308	RPUSD3	53	85.946	ENSANAG00000038118	-	89	85.946	Aotus_nancymaae
ENSMNEG00000040308	RPUSD3	56	88.325	ENSANAG00000019945	-	79	88.325	Aotus_nancymaae
ENSMNEG00000040308	RPUSD3	77	64.364	ENSANAG00000007127	-	98	64.364	Aotus_nancymaae
ENSMNEG00000040308	RPUSD3	98	81.105	ENSBTAG00000007968	RPUSD3	100	81.105	Bos_taurus
ENSMNEG00000040308	RPUSD3	100	78.977	ENSCAFG00000029733	RPUSD3	100	78.977	Canis_familiaris
ENSMNEG00000040308	RPUSD3	100	78.977	ENSCAFG00020008582	RPUSD3	100	78.977	Canis_lupus_dingo
ENSMNEG00000040308	RPUSD3	98	80.814	ENSCHIG00000026027	RPUSD3	100	80.814	Capra_hircus
ENSMNEG00000040308	RPUSD3	98	79.940	ENSTSYG00000009994	RPUSD3	96	81.734	Carlito_syrichta
ENSMNEG00000040308	RPUSD3	74	81.538	ENSCAPG00000017559	RPUSD3	98	81.538	Cavia_aperea
ENSMNEG00000040308	RPUSD3	98	67.826	ENSCPOG00000037956	RPUSD3	86	70.732	Cavia_porcellus
ENSMNEG00000040308	RPUSD3	100	88.319	ENSCCAG00000029530	RPUSD3	100	88.319	Cebus_capucinus
ENSMNEG00000040308	RPUSD3	100	98.291	ENSCATG00000036939	RPUSD3	100	98.291	Cercocebus_atys
ENSMNEG00000040308	RPUSD3	100	97.436	ENSCSAG00000010506	RPUSD3	100	97.436	Chlorocebus_sabaeus
ENSMNEG00000040308	RPUSD3	50	85.714	ENSCHOG00000010151	-	67	85.714	Choloepus_hoffmanni
ENSMNEG00000040308	RPUSD3	73	55.870	ENSCPBG00000008825	RPUSD3	95	55.426	Chrysemys_picta_bellii
ENSMNEG00000040308	RPUSD3	100	95.726	ENSCANG00000040711	RPUSD3	100	95.726	Colobus_angolensis_palliatus
ENSMNEG00000040308	RPUSD3	99	72.622	ENSCGRG00001004923	Rpusd3	96	72.622	Cricetulus_griseus_chok1gshd
ENSMNEG00000040308	RPUSD3	96	73.887	ENSCGRG00000018315	Rpusd3	98	73.887	Cricetulus_griseus_crigri
ENSMNEG00000040308	RPUSD3	99	76.218	ENSDNOG00000039160	RPUSD3	92	76.218	Dasypus_novemcinctus
ENSMNEG00000040308	RPUSD3	81	72.401	ENSDORG00000026827	Rpusd3	92	77.612	Dipodomys_ordii
ENSMNEG00000040308	RPUSD3	100	71.307	ENSETEG00000006538	RPUSD3	99	71.307	Echinops_telfairi
ENSMNEG00000040308	RPUSD3	58	38.835	ENSEBUG00000015605	RPUSD3	67	38.835	Eptatretus_burgeri
ENSMNEG00000040308	RPUSD3	99	80.516	ENSEASG00005014160	RPUSD3	97	80.516	Equus_asinus_asinus
ENSMNEG00000040308	RPUSD3	99	81.662	ENSECAG00000019988	RPUSD3	97	81.662	Equus_caballus
ENSMNEG00000040308	RPUSD3	94	57.941	ENSEEUG00000007353	RPUSD3	95	57.941	Erinaceus_europaeus
ENSMNEG00000040308	RPUSD3	100	79.545	ENSFCAG00000014199	RPUSD3	100	79.545	Felis_catus
ENSMNEG00000040308	RPUSD3	77	49.817	ENSFALG00000012968	RPUSD3	99	47.253	Ficedula_albicollis
ENSMNEG00000040308	RPUSD3	75	82.824	ENSFDAG00000008350	RPUSD3	81	82.824	Fukomys_damarensis
ENSMNEG00000040308	RPUSD3	75	55.133	ENSGAGG00000007493	RPUSD3	82	56.061	Gopherus_agassizii
ENSMNEG00000040308	RPUSD3	100	92.308	ENSGGOG00000013120	RPUSD3	100	92.308	Gorilla_gorilla
ENSMNEG00000040308	RPUSD3	95	67.454	ENSHGLG00000011722	RPUSD3	98	67.454	Heterocephalus_glaber_female
ENSMNEG00000040308	RPUSD3	95	67.454	ENSHGLG00100016038	RPUSD3	98	67.454	Heterocephalus_glaber_male
ENSMNEG00000040308	RPUSD3	99	77.937	ENSSTOG00000002125	RPUSD3	99	77.937	Ictidomys_tridecemlineatus
ENSMNEG00000040308	RPUSD3	98	73.837	ENSJJAG00000012679	Rpusd3	100	73.837	Jaculus_jaculus
ENSMNEG00000040308	RPUSD3	95	82.036	ENSLAFG00000017501	RPUSD3	97	82.036	Loxodonta_africana
ENSMNEG00000040308	RPUSD3	100	99.145	ENSMFAG00000032407	RPUSD3	100	99.145	Macaca_fascicularis
ENSMNEG00000040308	RPUSD3	100	99.405	ENSMMUG00000010628	RPUSD3	100	99.405	Macaca_mulatta
ENSMNEG00000040308	RPUSD3	100	98.860	ENSMLEG00000033940	RPUSD3	100	98.860	Mandrillus_leucophaeus
ENSMNEG00000040308	RPUSD3	95	75.522	ENSMAUG00000015473	Rpusd3	97	75.522	Mesocricetus_auratus
ENSMNEG00000040308	RPUSD3	98	80.814	ENSMICG00000002315	RPUSD3	100	80.814	Microcebus_murinus
ENSMNEG00000040308	RPUSD3	97	73.314	ENSMOCG00000022613	Rpusd3	99	73.314	Microtus_ochrogaster
ENSMNEG00000040308	RPUSD3	86	58.882	ENSMODG00000005210	RPUSD3	80	58.882	Monodelphis_domestica
ENSMNEG00000040308	RPUSD3	98	72.384	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.384	Mus_caroli
ENSMNEG00000040308	RPUSD3	98	72.674	ENSMUSG00000051169	Rpusd3	100	72.674	Mus_musculus
ENSMNEG00000040308	RPUSD3	98	73.256	MGP_PahariEiJ_G0022476	Rpusd3	100	73.256	Mus_pahari
ENSMNEG00000040308	RPUSD3	98	72.384	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.384	Mus_spretus
ENSMNEG00000040308	RPUSD3	99	77.650	ENSMPUG00000017132	RPUSD3	99	77.650	Mustela_putorius_furo
ENSMNEG00000040308	RPUSD3	97	83.090	ENSMLUG00000006135	RPUSD3	99	83.090	Myotis_lucifugus
ENSMNEG00000040308	RPUSD3	95	74.926	ENSNGAG00000023704	Rpusd3	99	74.926	Nannospalax_galili
ENSMNEG00000040308	RPUSD3	100	77.778	ENSNLEG00000004214	RPUSD3	95	94.030	Nomascus_leucogenys
ENSMNEG00000040308	RPUSD3	74	66.667	ENSMEUG00000013098	-	100	66.667	Notamacropus_eugenii
ENSMNEG00000040308	RPUSD3	95	63.018	ENSOPRG00000002300	RPUSD3	96	63.018	Ochotona_princeps
ENSMNEG00000040308	RPUSD3	74	80.843	ENSODEG00000018137	RPUSD3	90	80.843	Octodon_degus
ENSMNEG00000040308	RPUSD3	82	51.568	ENSOANG00000012081	-	100	51.568	Ornithorhynchus_anatinus
ENSMNEG00000040308	RPUSD3	97	67.241	ENSOCUG00000027885	RPUSD3	99	67.241	Oryctolagus_cuniculus
ENSMNEG00000040308	RPUSD3	89	83.974	ENSOGAG00000012592	RPUSD3	99	83.974	Otolemur_garnettii
ENSMNEG00000040308	RPUSD3	99	81.481	ENSOARG00000005928	RPUSD3	99	81.481	Ovis_aries
ENSMNEG00000040308	RPUSD3	100	90.883	ENSPPAG00000038083	RPUSD3	100	90.883	Pan_paniscus
ENSMNEG00000040308	RPUSD3	100	79.830	ENSPPRG00000024433	RPUSD3	100	79.830	Panthera_pardus
ENSMNEG00000040308	RPUSD3	100	80.415	ENSPTIG00000006828	RPUSD3	100	80.814	Panthera_tigris_altaica
ENSMNEG00000040308	RPUSD3	100	91.168	ENSPTRG00000051760	RPUSD3	100	91.168	Pan_troglodytes
ENSMNEG00000040308	RPUSD3	100	98.860	ENSPANG00000023885	RPUSD3	100	98.860	Papio_anubis
ENSMNEG00000040308	RPUSD3	98	72.965	ENSPEMG00000017245	Rpusd3	100	72.965	Peromyscus_maniculatus_bairdii
ENSMNEG00000040308	RPUSD3	82	63.793	ENSPCIG00000021901	RPUSD3	84	63.793	Phascolarctos_cinereus
ENSMNEG00000040308	RPUSD3	100	91.738	ENSPPYG00000013676	RPUSD3	100	91.738	Pongo_abelii
ENSMNEG00000040308	RPUSD3	82	61.246	ENSPCAG00000013731	-	100	61.246	Procavia_capensis
ENSMNEG00000040308	RPUSD3	100	84.943	ENSPCOG00000018314	RPUSD3	100	84.943	Propithecus_coquereli
ENSMNEG00000040308	RPUSD3	100	79.545	ENSPVAG00000011107	RPUSD3	100	79.545	Pteropus_vampyrus
ENSMNEG00000040308	RPUSD3	98	71.733	ENSRNOG00000009084	Rpusd3	100	71.733	Rattus_norvegicus
ENSMNEG00000040308	RPUSD3	100	96.011	ENSRBIG00000041230	RPUSD3	100	96.011	Rhinopithecus_bieti
ENSMNEG00000040308	RPUSD3	100	96.296	ENSRROG00000043328	RPUSD3	100	96.296	Rhinopithecus_roxellana
ENSMNEG00000040308	RPUSD3	100	88.034	ENSSBOG00000036106	RPUSD3	100	88.034	Saimiri_boliviensis_boliviensis
ENSMNEG00000040308	RPUSD3	88	58.710	ENSSHAG00000015536	RPUSD3	99	58.710	Sarcophilus_harrisii
ENSMNEG00000040308	RPUSD3	100	80.398	ENSSSCG00000011555	RPUSD3	100	80.398	Sus_scrofa
ENSMNEG00000040308	RPUSD3	66	50.644	ENSTGUG00000008744	RPUSD3	93	50.230	Taeniopygia_guttata
ENSMNEG00000040308	RPUSD3	82	77.855	ENSTBEG00000000176	RPUSD3	100	77.855	Tupaia_belangeri
ENSMNEG00000040308	RPUSD3	100	80.682	ENSTTRG00000007544	RPUSD3	100	80.682	Tursiops_truncatus
ENSMNEG00000040308	RPUSD3	89	81.410	ENSUAMG00000011354	RPUSD3	97	81.410	Ursus_americanus
ENSMNEG00000040308	RPUSD3	100	78.693	ENSUMAG00000018830	RPUSD3	100	78.693	Ursus_maritimus
ENSMNEG00000040308	RPUSD3	98	80.233	ENSVVUG00000023735	RPUSD3	100	80.233	Vulpes_vulpes
ENSMNEG00000040308	RPUSD3	79	49.822	ENSXETG00000023546	rpusd3	99	49.822	Xenopus_tropicalis