EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMNEG00000040407 (Gene tree)
Gene ID
105473570
Gene Symbol
-
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Macaca_nemestrina
Status
putative
Strand
Plus strand
Length
38784 bases
Position
chrKQ004719.1:8179889-8218672
Accession
105473570
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMNEP00000034525RNA_pol_Rpb1_5PF04998.172e-9911
ENSMNEP00000034520RNA_pol_Rpb1_5PF04998.172.1e-9911
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-32128
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-32228
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-32328
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-32428
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-32528
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-32628
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-32728
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-32828
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-32928
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321028
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321128
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321228
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321328
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321428
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321528
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321628
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321728
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321828
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-321928
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-322028
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-322128
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-322228
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-322328
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-322428
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-322528
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-322628
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-322728
ENSMNEP00000034525RNA_pol_Rpb1_RPF05001.137.7e-322828
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-27128
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-27228
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-27328
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-27428
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-27528
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-27628
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-27728
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-27828
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-27928
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271028
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271128
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271228
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271328
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271428
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271528
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271628
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271728
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271828
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-271928
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-272028
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-272128
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-272228
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-272328
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-272428
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-272528
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-272628
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-272728
ENSMNEP00000034520RNA_pol_Rpb1_RPF05001.136.7e-272828
ENSMNEP00000034525RNA_pol_Rpb1_4PF05000.176.1e-3811
ENSMNEP00000034520RNA_pol_Rpb1_4PF05000.176.4e-3811
ENSMNEP00000034525RNA_pol_Rpb1_2PF00623.202.1e-7411
ENSMNEP00000034520RNA_pol_Rpb1_2PF00623.202.2e-7411
ENSMNEP00000034525RNA_pol_Rpb1_3PF04983.181.6e-4911
ENSMNEP00000034520RNA_pol_Rpb1_3PF04983.181.7e-4911
ENSMNEP00000034525RNA_pol_Rpb1_1PF04997.129.6e-10911
ENSMNEP00000034520RNA_pol_Rpb1_1PF04997.121e-10811
ENSMNEP00000034525RNA_pol_Rpb1_7PF04990.123.8e-5411
ENSMNEP00000034520RNA_pol_Rpb1_7PF04990.123.9e-5411
ENSMNEP00000034525RNA_pol_Rpb1_6PF04992.142.6e-6711
ENSMNEP00000034520RNA_pol_Rpb1_6PF04992.142.7e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMNET00000058975-5820-ENSMNEP000000345251939 (aa)-A0A2K6DF48
ENSMNET00000058970-5934XM_011727395ENSMNEP000000345201977 (aa)XP_011725697A0A2K6DF42
Gene Model
Click here to download ENSMNEG00000040407's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000040407's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMNEG00000040407-5851.899ENSMNEG00000043313POLR1A8230.769
ENSMNEG00000040407-6146.296ENSMNEG00000035163POLR3A8846.296
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMNEG00000040407-8293.986ENSAPOG00000006552polr2a9193.979Acanthochromis_polyacanthus
ENSMNEG00000040407-10098.939ENSAMEG00000016265-10098.939Ailuropoda_melanoleuca
ENSMNEG00000040407-8194.286ENSACIG00000015982polr2a8194.278Amphilophus_citrinellus
ENSMNEG00000040407-9891.383ENSAOCG00000004255polr2a9694.278Amphiprion_ocellaris
ENSMNEG00000040407-8294.110ENSAPEG00000012623polr2a8294.103Amphiprion_percula
ENSMNEG00000040407-8293.924ENSATEG00000019644polr2a8293.917Anabas_testudineus
ENSMNEG00000040407-10097.673ENSACAG00000014561POLR2A10097.673Anolis_carolinensis
ENSMNEG00000040407-10099.241ENSANAG00000020093-10099.241Aotus_nancymaae
ENSMNEG00000040407-8293.738ENSACLG00000006735polr2a8293.731Astatotilapia_calliptera
ENSMNEG00000040407-8294.420ENSAMXG00000020046polr2a8294.413Astyanax_mexicanus
ENSMNEG00000040407-10099.191ENSBTAG00000046765POLR2A10099.191Bos_taurus
ENSMNEG00000040407-9869.717WBGene00000123ama-19972.727Caenorhabditis_elegans
ENSMNEG00000040407-10098.786ENSCAFG00000016532POLR2A10098.886Canis_familiaris
ENSMNEG00000040407-10098.504ENSCAFG00020007929-10098.504Canis_lupus_dingo
ENSMNEG00000040407-10099.191ENSCHIG00000027173-10099.191Capra_hircus
ENSMNEG00000040407-10099.226ENSTSYG00000012803-10099.226Carlito_syrichta
ENSMNEG00000040407-9894.769ENSCAPG00000001882-9998.037Cavia_aperea
ENSMNEG00000040407-10094.962ENSCPOG00000014812-9998.028Cavia_porcellus
ENSMNEG00000040407-10099.241ENSCCAG00000020938-10099.241Cebus_capucinus
ENSMNEG00000040407-10099.292ENSCATG00000013680-10099.292Cercocebus_atys
ENSMNEG00000040407-10099.090ENSCLAG00000012196-10099.090Chinchilla_lanigera
ENSMNEG00000040407-10090.186ENSCSAG00000011644-8290.808Chlorocebus_sabaeus
ENSMNEG00000040407-10093.273ENSCPBG00000012697POLR2A10093.273Chrysemys_picta_bellii
ENSMNEG00000040407-9976.099ENSCING00000007884-9976.255Ciona_intestinalis
ENSMNEG00000040407-9775.813ENSCSAVG00000008334-9983.871Ciona_savignyi
ENSMNEG00000040407-10098.634ENSCANG00000010622-10098.634Colobus_angolensis_palliatus
ENSMNEG00000040407-10094.843ENSCGRG00001003538Polr2a10094.843Cricetulus_griseus_chok1gshd
ENSMNEG00000040407-8195.644ENSCGRG00000012105Polr2a9795.506Cricetulus_griseus_crigri
ENSMNEG00000040407-8293.366ENSCSEG00000002635polr2a8293.516Cynoglossus_semilaevis
ENSMNEG00000040407-8294.234ENSCVAG00000005156polr2a8294.227Cyprinodon_variegatus
ENSMNEG00000040407-8294.052ENSDARG00000099966polr2a8294.045Danio_rerio
ENSMNEG00000040407-10096.257ENSDNOG00000016482-10096.257Dasypus_novemcinctus
ENSMNEG00000040407-10099.241ENSDORG00000008667Polr2a10099.241Dipodomys_ordii
ENSMNEG00000040407-9969.889FBgn0003277RpII2159974.516Drosophila_melanogaster
ENSMNEG00000040407-9491.382ENSETEG00000002540-9487.190Echinops_telfairi
ENSMNEG00000040407-8187.648ENSEBUG00000013967polr2a8287.057Eptatretus_burgeri
ENSMNEG00000040407-8197.394ENSEASG00005019114-8397.393Equus_asinus_asinus
ENSMNEG00000040407-10099.191ENSECAG00000018485POLR2A10099.191Equus_caballus
ENSMNEG00000040407-8899.266ENSEEUG00000001154-9599.266Erinaceus_europaeus
ENSMNEG00000040407-8892.434ENSELUG00000014284polr2a8492.424Esox_lucius
ENSMNEG00000040407-10099.191ENSFDAG00000008287-10099.191Fukomys_damarensis
ENSMNEG00000040407-9192.064ENSFHEG00000001768polr2a9894.227Fundulus_heteroclitus
ENSMNEG00000040407-9989.940ENSGMOG00000007725polr2a100100.000Gadus_morhua
ENSMNEG00000040407-9994.366ENSGAFG00000005389polr2a9991.993Gambusia_affinis
ENSMNEG00000040407-9990.326ENSGACG00000019366polr2a10087.834Gasterosteus_aculeatus
ENSMNEG00000040407-10097.426ENSGGOG00000014800-10097.426Gorilla_gorilla
ENSMNEG00000040407-9191.631ENSHBUG00000018937polr2a9993.731Haplochromis_burtoni
ENSMNEG00000040407-10099.191ENSHGLG00000012381POLR2A10099.191Heterocephalus_glaber_female
ENSMNEG00000040407-10099.191ENSHGLG00100014843POLR2A10099.191Heterocephalus_glaber_male
ENSMNEG00000040407-8293.490ENSHCOG00000011874polr2a8293.482Hippocampus_comes
ENSMNEG00000040407-8293.738ENSIPUG00000002613Polr2a8293.731Ictalurus_punctatus
ENSMNEG00000040407-10099.241ENSSTOG00000001304-10099.241Ictidomys_tridecemlineatus
ENSMNEG00000040407-10099.140ENSJJAG00000013049Polr2a10099.140Jaculus_jaculus
ENSMNEG00000040407-8094.253ENSKMAG00000016343polr2a8584.789Kryptolebias_marmoratus
ENSMNEG00000040407-8293.738ENSLBEG00000027652polr2a8293.897Labrus_bergylta
ENSMNEG00000040407-8086.654ENSLACG00000012071POLR2A8186.709Latimeria_chalumnae
ENSMNEG00000040407-9094.399ENSLOCG00000013863polr2a9994.099Lepisosteus_oculatus
ENSMNEG00000040407-10099.191ENSLAFG00000008626-10099.191Loxodonta_africana
ENSMNEG00000040407-5098.468ENSMFAG00000007042-9998.468Macaca_fascicularis
ENSMNEG00000040407-10099.292ENSMMUG00000023620-10099.292Macaca_mulatta
ENSMNEG00000040407-9994.338ENSMLEG00000030263-9998.468Mandrillus_leucophaeus
ENSMNEG00000040407-8293.862ENSMAMG00000003351polr2a8293.855Mastacembelus_armatus
ENSMNEG00000040407-8293.738ENSMZEG00005021429polr2a8293.731Maylandia_zebra
ENSMNEG00000040407-5199.898ENSMAUG00000021055-9999.898Mesocricetus_auratus
ENSMNEG00000040407-10099.140ENSMICG00000013372-10099.140Microcebus_murinus
ENSMNEG00000040407-10095.461ENSMOCG00000018279Polr2a10095.461Microtus_ochrogaster
ENSMNEG00000040407-8493.304ENSMMOG00000012515polr2a9593.296Mola_mola
ENSMNEG00000040407-10096.915ENSMODG00000007009-10096.409Monodelphis_domestica
ENSMNEG00000040407-9794.106ENSMALG00000008716polr2a9994.151Monopterus_albus
ENSMNEG00000040407-10099.191MGP_CAROLIEiJ_G0016587Polr2a10099.191Mus_caroli
ENSMNEG00000040407-10099.191ENSMUSG00000005198Polr2a10099.191Mus_musculus
ENSMNEG00000040407-10097.429MGP_PahariEiJ_G0017718Polr2a10097.429Mus_pahari
ENSMNEG00000040407-10099.191MGP_SPRETEiJ_G0017423Polr2a10099.191Mus_spretus
ENSMNEG00000040407-10099.140ENSMPUG00000009648-10099.140Mustela_putorius_furo
ENSMNEG00000040407-10098.737ENSMLUG00000009088-10098.737Myotis_lucifugus
ENSMNEG00000040407-10099.241ENSNGAG00000002543Polr2a10099.241Nannospalax_galili
ENSMNEG00000040407-8193.968ENSNBRG00000002005polr2a8193.961Neolamprologus_brichardi
ENSMNEG00000040407-10099.226ENSNLEG00000009460-10099.226Nomascus_leucogenys
ENSMNEG00000040407-9499.455ENSMEUG00000008611-9399.455Notamacropus_eugenii
ENSMNEG00000040407-8099.242ENSOPRG00000015116-9999.242Ochotona_princeps
ENSMNEG00000040407-10096.235ENSODEG00000017674-10096.235Octodon_degus
ENSMNEG00000040407-8293.924ENSONIG00000009231polr2a8293.917Oreochromis_niloticus
ENSMNEG00000040407-9997.310ENSOCUG00000017929-10097.310Oryctolagus_cuniculus
ENSMNEG00000040407-8293.862ENSORLG00000006431polr2a8293.855Oryzias_latipes
ENSMNEG00000040407-8293.862ENSORLG00020010235polr2a8293.855Oryzias_latipes_hni
ENSMNEG00000040407-8293.924ENSORLG00015007075polr2a8293.917Oryzias_latipes_hsok
ENSMNEG00000040407-9895.699ENSOMEG00000010713polr2a10093.971Oryzias_melastigma
ENSMNEG00000040407-10099.090ENSOGAG00000033608-10099.090Otolemur_garnettii
ENSMNEG00000040407-9998.998ENSOARG00000013874-10098.998Ovis_aries
ENSMNEG00000040407-10098.504ENSPPAG00000043734-10098.504Pan_paniscus
ENSMNEG00000040407-10099.226ENSPTRG00000008691POLR2A10099.226Pan_troglodytes
ENSMNEG00000040407-10098.634ENSPANG00000024099-10098.634Papio_anubis
ENSMNEG00000040407-7695.035ENSPKIG00000005727polr2a8492.857Paramormyrops_kingsleyae
ENSMNEG00000040407-9896.053ENSPSIG00000014006POLR2A10096.053Pelodiscus_sinensis
ENSMNEG00000040407-10093.781ENSPMGG00000019734polr2a9994.278Periophthalmus_magnuspinnatus
ENSMNEG00000040407-10099.241ENSPEMG00000012521Polr2a10099.241Peromyscus_maniculatus_bairdii
ENSMNEG00000040407-9686.726ENSPCIG00000028851-9686.726Phascolarctos_cinereus
ENSMNEG00000040407-9192.683ENSPFOG00000007890polr2a9994.165Poecilia_formosa
ENSMNEG00000040407-9192.683ENSPLAG00000007399polr2a9994.165Poecilia_latipinna
ENSMNEG00000040407-9192.683ENSPMEG00000002071polr2a9994.278Poecilia_mexicana
ENSMNEG00000040407-8294.110ENSPREG00000013122polr2a8294.103Poecilia_reticulata
ENSMNEG00000040407-10096.216ENSPPYG00000007924-10098.181Pongo_abelii
ENSMNEG00000040407-9299.737ENSPCAG00000006951-9299.737Procavia_capensis
ENSMNEG00000040407-10099.175ENSPCOG00000025260-10099.175Propithecus_coquereli
ENSMNEG00000040407-10098.988ENSPVAG00000005069-10098.988Pteropus_vampyrus
ENSMNEG00000040407-9393.942ENSPNYG00000022340polr2a9686.894Pundamilia_nyererei
ENSMNEG00000040407-8294.234ENSPNAG00000011237polr2a8294.227Pygocentrus_nattereri
ENSMNEG00000040407-10099.140ENSRNOG00000028834Polr2a10099.140Rattus_norvegicus
ENSMNEG00000040407-10095.823ENSRBIG00000002471-10097.834Rhinopithecus_bieti
ENSMNEG00000040407-10098.533ENSRROG00000029583-10098.938Rhinopithecus_roxellana
ENSMNEG00000040407-8388.000YDL140CRPO219980.180Saccharomyces_cerevisiae
ENSMNEG00000040407-10099.241ENSSBOG00000000808-10099.241Saimiri_boliviensis_boliviensis
ENSMNEG00000040407-9199.007ENSSHAG00000002858-10092.868Sarcophilus_harrisii
ENSMNEG00000040407-8294.048ENSSFOG00015023275polr2a8294.041Scleropages_formosus
ENSMNEG00000040407-8293.490ENSSMAG00000009137polr2a8293.482Scophthalmus_maximus
ENSMNEG00000040407-8293.986ENSSDUG00000020466polr2a8293.979Seriola_dumerili
ENSMNEG00000040407-8293.986ENSSLDG00000020613polr2a8293.979Seriola_lalandi_dorsalis
ENSMNEG00000040407-9794.557ENSSARG00000005875-9994.557Sorex_araneus
ENSMNEG00000040407-10094.048ENSSPAG00000016741polr2a9494.041Stegastes_partitus
ENSMNEG00000040407-10098.483ENSSSCG00000028278-10098.483Sus_scrofa
ENSMNEG00000040407-9988.600ENSTRUG00000012320polr2a8188.586Takifugu_rubripes
ENSMNEG00000040407-9792.498ENSTNIG00000010136polr2a10092.489Tetraodon_nigroviridis
ENSMNEG00000040407-7599.869ENSTBEG00000013294-5899.869Tupaia_belangeri
ENSMNEG00000040407-10097.673ENSTTRG00000014273-10097.673Tursiops_truncatus
ENSMNEG00000040407-9696.409ENSUAMG00000014866-10096.285Ursus_americanus
ENSMNEG00000040407-9996.550ENSUMAG00000015732-10096.550Ursus_maritimus
ENSMNEG00000040407-66100.000ENSVPAG00000008842-76100.000Vicugna_pacos
ENSMNEG00000040407-10095.802ENSVVUG00000027878-10097.774Vulpes_vulpes
ENSMNEG00000040407-9996.573ENSXETG00000012465polr2a10096.573Xenopus_tropicalis
ENSMNEG00000040407-9294.222ENSXCOG00000001804polr2a9494.215Xiphophorus_couchianus
ENSMNEG00000040407-8294.110ENSXMAG00000015687polr2a8294.103Xiphophorus_maculatus

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